You are here

Home

M747DRAFT_298734-T1, M747DRAFT_298734-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298734-T1
Unique NameM747DRAFT_298734-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851939.1:106974..108499-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298734-T1 ID=M747DRAFT_298734-T1|Name=M747DRAFT_298734-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1526bp|location=Sequence derived from alignment at KZ851939.1:106974..108499- (Aspergillus niger ATCC 13496)
CCACAGTCATGGACAACAAGCGCAGCCCTTCGCCAGCGATTCCAATGGAC
AGTTCCGATTCTTCGGATACAGAAAAGCGGACTCCCACAGAATCCGCGAA
TAAAGTCCCTCCTCCCCCTCCTGATGGCGGCTTGACAGCGTGGTTGCAAG
TTGTGGGAGCCTTTTTCCTCTTCTTCAACTCCTGGTAAGTTATGCGGATC
TCTTCAAACATAACCCATAACACCAAATAACTCAGTTCCTCAGGGGTATC
CTCAACGCCTACGGAGTATTCCAGAGCTACTACCAATCGGACCTGATCCC
TACATACTCATCCTCCGCTATCACCTGGATCGGCACCGTGCAAGGTTTCG
TCCTGTTTCTGGTTGGAGTGATTGTCGGCCCCATCTTTGACAAAGGCTTT
CTGCACAGCTTGATTGCCTTTGGAACCTTCATGGTCGTGTTCGGCCTGAT
GATGACCTCCCTGTCAACCCAGTACTACCAGCTCTTCCTTGCGCACGGCA
TCACAGTGGGCATCGGCTGCGCATTTCTCTTTCTACCCAGCATCGCCATC
GTCGCCACCTACTTCACCTCACGCCGCGCCGTCGCCACCGGCATTACAGC
GTCAGGAGGCAGCATCGGGGCGGTGATATACCCCATAATGTTCCACAAAT
TGATCAGCCGAGTAGGGTTCGGCTGGACGACACGGATCATCGGCTTTGTA
GCGCTAGCTGGACTCTCAGTCTCAATGCTGGTATTGAGGCGGCGCCTACC
ACCACCAACGAAGAGTAGATCTTTGCTGGACGTTGCTGCTCTCAAGGAAC
CAACCTTCCTGGTTTTCAGTTTCGGCCTGTTCTTCTGCTTCGTGGGACTC
TACTTCCCTTTCTTTTACCTCCAGAGTTACTTTACCTACTACCTGCACAA
CGATAGCAGCTTAGCATTCTACATTTTCGCAGTCCTAAACGCTACCTCCG
TGCTGGGCCGCATCACCCCCGGTCTTATGGCCGACCGTATCGGCGGCTTG
AACACTCTGGTGCCTATTAGTATCCTGGCGACCATTTTGGCATTTGTGTG
GATTGCCGTGCGCAACGTGGGCGGGGCGGTTGTTTTCACCTGCTTGTACG
GCTACGCTTCCGGGGCGATTGTCTCCCTGCCACCGTCTATCTTGACACGC
ATGTCTCCGAAACTGGGTGTTGTGGGCACGCGCCTGGGCATGATCTTCAT
GTTTGCTGGTTGCGGGTTCCTGATCGGTACGCCGATTGCTTCGCTTCTGC
TGGATCTAGAGGAGGCTTCGTTTTGGAAGGCTCAGCTATTCAGTGGTATG
TTTGTCGCTGCTGGGACGATCTGTTTTGTTGTTCTGCGGGTGATGCTGTG
GCGAAAGGGCGGGGGCTGGAAGATTTGAGAGGACAGCTGAAGAGGAGCTA
TGACCGCTAAGAGAAGTTGGCGGTGGTGGAGTGGTACATGCAGCCATCCA
TCTGTCGTAATGTTACAGCATGGCGGACAATAGAGCTATACGTTGCACAT
CATAGAAACTAATTCACTGACTCGCT
back to top

Coding sequence (CDS) from alignment at KZ851939.1:106974..108499-

>M747DRAFT_298734-T1 ID=M747DRAFT_298734-T1|Name=M747DRAFT_298734-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2622bp|location=Sequence derived from alignment at KZ851939.1:106974..108499- (Aspergillus niger ATCC 13496)
GGGTATCCTCAACGCCTACGGAGTATTCCAGAGCTACTACCAATCGGACC
TGATCCCTACATACTCATCCTCCGCTATCACCTGGATCGGCACCGTGCAA
GGTTTCGTCCTGTTTCTGGTTGGAGTGATTGTCGGCCCCATCTTTGACAA
AGGCTTTCTGCACAGCTTGATTGCCTTTGGAACCTTCATGGTCGTGTTCG
GCCTGATGATGACCTCCCTGTCAACCCAGTACTACCAGCTCTTCCTTGCG
CACGGCATCACAGTGGGCATCGGCTGCGCATTTCTCTTTCTACCCAGCAT
CGCCATCGTCGCCACCTACTTCACCTCACGCCGCGCCGTCGCCACCGGCA
TTACAGCGTCAGGAGGCAGCATCGGGGCGGTGATATACCCCATAATGTTC
CACAAATTGATCAGCCGAGTAGGGTTCGGCTGGACGACACGGATCATCGG
CTTTGTAGCGCTAGCTGGACTCTCAGTCTCAATGCTGGTATTGAGGCGGC
GCCTACCACCACCAACGAAGAGTAGATCTTTGCTGGACGTTGCTGCTCTC
AAGGAACCAACCTTCCTGGTTTTCAGTTTCGGCCTGTTCTTCTGCTTCGT
GGGACTCTACTTCCCTTTCTTTTACCTCCAGAGTTACTTTACCTACTACC
TGCACAACGATAGCAGCTTAGCATTCTACATTTTCGCAGTCCTAAACGCT
ACCTCCGTGCTGGGCCGCATCACCCCCGGTCTTATGGCCGACCGTATCGG
CGGCTTGAACACTCTGGTGCCTATTAGTATCCTGGCGACCATTTTGGCAT
TTGTGTGGATTGCCGTGCGCAACGTGGGCGGGGCGGTTGTTTTCACCTGC
TTGTACGGCTACGCTTCCGGGGCGATTGTCTCCCTGCCACCGTCTATCTT
GACACGCATGTCTCCGAAACTGGGTGTTGTGGGCACGCGCCTGGGCATGA
TCTTCATGTTTGCTGGTTGCGGGTTCCTGATCGGTACGCCGATTGCTTCG
CTTCTGCTGGATCTAGAGGAGGCTTCGTTTTGGAAGGCTCAGCTATTCAG
TGGTATGTTTGTCGCTGCTGGGACGATCTGTTTTGTTGTTCTGCGGGTGA
TGCTGTGGCGAAAGGGCGGGGGCTGGAAGATTTGAATGGACAACAAGCGC
AGCCCTTCGCCAGCGATTCCAATGGACAGTTCCGATTCTTCGGATACAGA
AAAGCGGACTCCCACAGAATCCGCGAATAAAGTCCCTCCTCCCCCTCCTG
ATGGCGGCTTGACAGCGTGGTTGCAAGTTGTGGGAGCCTTTTTCCTCTTC
TTCAACTCCTGGGGTATCCTCAACGCCTACGGAGTATTCCAGAGCTACTA
CCAATCGGACCTGATCCCTACATACTCATCCTCCGCTATCACCTGGATCG
GCACCGTGCAAGGTTTCGTCCTGTTTCTGGTTGGAGTGATTGTCGGCCCC
ATCTTTGACAAAGGCTTTCTGCACAGCTTGATTGCCTTTGGAACCTTCAT
GGTCGTGTTCGGCCTGATGATGACCTCCCTGTCAACCCAGTACTACCAGC
TCTTCCTTGCGCACGGCATCACAGTGGGCATCGGCTGCGCATTTCTCTTT
CTACCCAGCATCGCCATCGTCGCCACCTACTTCACCTCACGCCGCGCCGT
CGCCACCGGCATTACAGCGTCAGGAGGCAGCATCGGGGCGGTGATATACC
CCATAATGTTCCACAAATTGATCAGCCGAGTAGGGTTCGGCTGGACGACA
CGGATCATCGGCTTTGTAGCGCTAGCTGGACTCTCAGTCTCAATGCTGGT
ATTGAGGCGGCGCCTACCACCACCAACGAAGAGTAGATCTTTGCTGGACG
TTGCTGCTCTCAAGGAACCAACCTTCCTGGTTTTCAGTTTCGGCCTGTTC
TTCTGCTTCGTGGGACTCTACTTCCCTTTCTTTTACCTCCAGAGTTACTT
TACCTACTACCTGCACAACGATAGCAGCTTAGCATTCTACATTTTCGCAG
TCCTAAACGCTACCTCCGTGCTGGGCCGCATCACCCCCGGTCTTATGGCC
GACCGTATCGGCGGCTTGAACACTCTGGTGCCTATTAGTATCCTGGCGAC
CATTTTGGCATTTGTGTGGATTGCCGTGCGCAACGTGGGCGGGGCGGTTG
TTTTCACCTGCTTGTACGGCTACGCTTCCGGGGCGATTGTCTCCCTGCCA
CCGTCTATCTTGACACGCATGTCTCCGAAACTGGGTGTTGTGGGCACGCG
CCTGGGCATGATCTTCATGTTTGCTGGTTGCGGGTTCCTGATCGGTACGC
CGATTGCTTCGCTTCTGCTGGATCTAGAGGAGGCTTCGTTTTGGAAGGCT
CAGCTATTCAGTGGTATGTTTGTCGCTGCTGGGACGATCTGTTTTGTTGT
TCTGCGGGTGATGCTGTGGCGAAAGGGCGGGGGCTGGAAGATTTGAATGG
ACAACAAGCGCAGCCCTTCGCCAGCGATTCCAATGGACAGTTCCGATTCT
TCGGATACAGAAAAGCGGACTCCCACAGAATCCGCGAATAAAGTCCCTCC
TCCCCCTCCTGATGGCGGCTTGACAGCGTGGTTGCAAGTTGTGGGAGCCT
TTTTCCTCTTCTTCAACTCCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298734M747DRAFT_298734Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298734-T1M747DRAFT_298734-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298734-T1.cdsM747DRAFT_298734-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298734-T1.utr3p1M747DRAFT_298734-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298734-T1.exon2M747DRAFT_298734-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298734-T1.exon1M747DRAFT_298734-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298734-T1.utr5p1M747DRAFT_298734-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
ProductMFS monocarboxylate transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851939.1supercontigKZ851939.1:106974..108499 -
Powered by Drupal