You are here

Home

M747DRAFT_299051-T1, M747DRAFT_299051-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299051-T1
Unique NameM747DRAFT_299051-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851943.1:200282..201948+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299051-T1 ID=M747DRAFT_299051-T1|Name=M747DRAFT_299051-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1667bp|location=Sequence derived from alignment at KZ851943.1:200282..201948+ (Aspergillus niger ATCC 13496)
CGCCAACCAACATTGACAGTTGATCGCGCCCCTTCCCTCTCATCATGCCG
GTATGTTTCCTCGACCTCATGCAATAGACCCGCATTAACCAATCACAGCT
CATAGTATTGACCGGCTACCCCTGCTCCGGCCTCACCTACCGCGCCCACC
AACTCGCGACGCAGCTCGAAGAGACCCAAACCGAGCTCTTCAACACCGGC
GCTCTCCCCTCCTCGAAACCCCGCTACAAGATCCACGTTGTGCCTACTCA
TGATCCCTCCCATCCGCGAACCGTTTACGACCATGCCCGCACAGAAAAGG
AGACACGGGGCGTGGCATATGCGCGGGCGAAGCGCGCGCTCGGCAAAGAC
AGCTTCGTGATTCTCGACGGAATGAACTACATCAAAGGATACCGTTATCA
GCTGTGGTGTGAGGCGAAGGCACTGGGAACAACATGTTGCGTGGTATGCT
ATGCTATGCTCTCCTCCACCAGCCCCTGAACAACCAGCAAGCAACACACG
CACTAACACAATCACCAGGTCCACGTCGGCACACCCATCGACCAATGCGT
CGCAAACAACGAGGCTCGACTCCGCCGTCAACAAGGCGCAGACAATAGTA
ACGAGGACACCTCCAATCCTAACGCCGAAGCGACACCATCCACCACCGAA
CCCACCTCCGACCAAGAAGACCCCTACCCACCGGAACTCCTGAACAACCT
CATCTTCCGCTACGAAGAACCCAGCATCCACAGCCGCTGGGACAAGCCCC
TCTTCACCGTCCCCTGGACCGACGCATCCCCCCCAATCGCCGAAATCTGG
ACAGCCCTAACCGGCATCCCGCACCCTTCAGCAACAACAACCCCCGAGCC
CGCCTCCATATCAAACCTCACCTCAGCCCTCAATACCACCTCTCTCTCCT
CAGCAGCAAGCACCACGACCACAACAGCTACCCCCTCCACATTCCGCACC
AACCGTCCCAAAATCAAACCCCACCAAGCAACCGCCCTCCCCGCCGCCAC
AGACTCCACAGCCCTCTACAACATGGAAAAGCGCACCTCAGCCATCGTCT
CCGCCATCCGCACCTTCACGCTCTCCAACCCCTCCGCTGAAGCCGCCCTC
GCGCAGAGCCAAGACGGCAGCAGCAGCAGCAGTGGACGGGGAATAACCAT
CCCCGTCCCGGAGGCGTCCATGCCCGTTTATGTTCCGGCGCATGTGGCGA
CGTCCGGCACGACGGATGAATTAGCCGGCGCGGGCGGCATCCTGGCGCTG
CCGAGACTGCAGCGGTTGAGGAGGCAGTGGATTGCGTTGAATCGGGCGTA
TGTGCAGGGGGCGCATGCGTCGAGTAAGGGCGGGTTGAGTGCGGAGCAGG
TTCCTGATGCGTTTGTGCGGTTTTTGAATGCGGAGTTTGGGGCGGAGAGT
GACTAGATAACATCCTATTTTCTTAGTTTTGATTTTCACTGGTGTGGTTT
GTTTGTGATGAGGGGTTGGGTGTACACGCCCTCTTCTCTCGTCAAGGCGA
GTCGTTGGTTAGGGAAGGGCTTATATTCAGTGGTGTGATAGAGACGGGCG
GGAAAAGTTTTGATAGAAGCGTGCGTTTTTGGAAGTATTTAGAGAGCGTT
TTTTTCGTTATGGGTTACTTTAGTGCCTGCTGCAAATAACGTCTAGCTAC
AGAGCCTACTACTAGGC
back to top

Coding sequence (CDS) from alignment at KZ851943.1:200282..201948+

>M747DRAFT_299051-T1 ID=M747DRAFT_299051-T1|Name=M747DRAFT_299051-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3717bp|location=Sequence derived from alignment at KZ851943.1:200282..201948+ (Aspergillus niger ATCC 13496)
ATGCCGCTCATAGTATTGACCGGCTACCCCTGCTCCGGCCTCACCTACCG
CGCCCACCAACTCGCGACGCAGCTCGAAGAGACCCAAACCGAGCTCTTCA
ACACCGGCGCTCTCCCCTCCTCGAAACCCCGCTACAAGATCCACGTTGTG
CCTACTCATGATCCCTCCCATCCGCGAACCGTTTACGACCATGCCCGCAC
AGAAAAGGAGACACGGGGCGTGGCATATGCGCGGGCGAAGCGCGCGCTCG
GCAAAGACAGCTTCGTGATTCTCGACGGAATGAACTACATCAAAGGATAC
CGTTATCAGCTGTGGTGTGAGGCGAAGGCACTGGGAACAACATGTTGCGT
GGTCCACGTCGGCACACCCATCGACCAATGCGTCGCAAACAACGAGGCTC
GACTCCGCCGTCAACAAGGCGCAGACAATAGTAACGAGGACACCTCCAAT
CCTAACGCCGAAGCGACACCATCCACCACCGAACCCACCTCCGACCAAGA
AGACCCCTACCCACCGGAACTCCTGAACAACCTCATCTTCCGCTACGAAG
AACCCAGCATCCACAGCCGCTGGGACAAGCCCCTCTTCACCGTCCCCTGG
ACCGACGCATCCCCCCCAATCGCCGAAATCTGGACAGCCCTAACCGGCAT
CCCGCACCCTTCAGCAACAACAACCCCCGAGCCCGCCTCCATATCAAACC
TCACCTCAGCCCTCAATACCACCTCTCTCTCCTCAGCAGCAAGCACCACG
ACCACAACAGCTACCCCCTCCACATTCCGCACCAACCGTCCCAAAATCAA
ACCCCACCAAGCAACCGCCCTCCCCGCCGCCACAGACTCCACAGCCCTCT
ACAACATGGAAAAGCGCACCTCAGCCATCGTCTCCGCCATCCGCACCTTC
ACGCTCTCCAACCCCTCCGCTGAAGCCGCCCTCGCGCAGAGCCAAGACGG
CAGCAGCAGCAGCAGTGGACGGGGAATAACCATCCCCGTCCCGGAGGCGT
CCATGCCCGTTTATGTTCCGGCGCATGTGGCGACGTCCGGCACGACGGAT
GAATTAGCCGGCGCGGGCGGCATCCTGGCGCTGCCGAGACTGCAGCGGTT
GAGGAGGCAGTGGATTGCGTTGAATCGGGCGTATGTGCAGGGGGCGCATG
CGTCGAGTAAGGGCGGGTTGAGTGCGGAGCAGGTTCCTGATGCGTTTGTG
CGGTTTTTGAATGCGGAGTTTGGGGCGGAGAGTGACTAGATGCCGCTCAT
AGTATTGACCGGCTACCCCTGCTCCGGCCTCACCTACCGCGCCCACCAAC
TCGCGACGCAGCTCGAAGAGACCCAAACCGAGCTCTTCAACACCGGCGCT
CTCCCCTCCTCGAAACCCCGCTACAAGATCCACGTTGTGCCTACTCATGA
TCCCTCCCATCCGCGAACCGTTTACGACCATGCCCGCACAGAAAAGGAGA
CACGGGGCGTGGCATATGCGCGGGCGAAGCGCGCGCTCGGCAAAGACAGC
TTCGTGATTCTCGACGGAATGAACTACATCAAAGGATACCGTTATCAGCT
GTGGTGTGAGGCGAAGGCACTGGGAACAACATGTTGCGTGGTCCACGTCG
GCACACCCATCGACCAATGCGTCGCAAACAACGAGGCTCGACTCCGCCGT
CAACAAGGCGCAGACAATAGTAACGAGGACACCTCCAATCCTAACGCCGA
AGCGACACCATCCACCACCGAACCCACCTCCGACCAAGAAGACCCCTACC
CACCGGAACTCCTGAACAACCTCATCTTCCGCTACGAAGAACCCAGCATC
CACAGCCGCTGGGACAAGCCCCTCTTCACCGTCCCCTGGACCGACGCATC
CCCCCCAATCGCCGAAATCTGGACAGCCCTAACCGGCATCCCGCACCCTT
CAGCAACAACAACCCCCGAGCCCGCCTCCATATCAAACCTCACCTCAGCC
CTCAATACCACCTCTCTCTCCTCAGCAGCAAGCACCACGACCACAACAGC
TACCCCCTCCACATTCCGCACCAACCGTCCCAAAATCAAACCCCACCAAG
CAACCGCCCTCCCCGCCGCCACAGACTCCACAGCCCTCTACAACATGGAA
AAGCGCACCTCAGCCATCGTCTCCGCCATCCGCACCTTCACGCTCTCCAA
CCCCTCCGCTGAAGCCGCCCTCGCGCAGAGCCAAGACGGCAGCAGCAGCA
GCAGTGGACGGGGAATAACCATCCCCGTCCCGGAGGCGTCCATGCCCGTT
TATGTTCCGGCGCATGTGGCGACGTCCGGCACGACGGATGAATTAGCCGG
CGCGGGCGGCATCCTGGCGCTGCCGAGACTGCAGCGGTTGAGGAGGCAGT
GGATTGCGTTGAATCGGGCGTATGTGCAGGGGGCGCATGCGTCGAGTAAG
GGCGGGTTGAGTGCGGAGCAGGTTCCTGATGCGTTTGTGCGGTTTTTGAA
TGCGGAGTTTGGGGCGGAGAGTGACTAGATGCCGCTCATAGTATTGACCG
GCTACCCCTGCTCCGGCCTCACCTACCGCGCCCACCAACTCGCGACGCAG
CTCGAAGAGACCCAAACCGAGCTCTTCAACACCGGCGCTCTCCCCTCCTC
GAAACCCCGCTACAAGATCCACGTTGTGCCTACTCATGATCCCTCCCATC
CGCGAACCGTTTACGACCATGCCCGCACAGAAAAGGAGACACGGGGCGTG
GCATATGCGCGGGCGAAGCGCGCGCTCGGCAAAGACAGCTTCGTGATTCT
CGACGGAATGAACTACATCAAAGGATACCGTTATCAGCTGTGGTGTGAGG
CGAAGGCACTGGGAACAACATGTTGCGTGGTCCACGTCGGCACACCCATC
GACCAATGCGTCGCAAACAACGAGGCTCGACTCCGCCGTCAACAAGGCGC
AGACAATAGTAACGAGGACACCTCCAATCCTAACGCCGAAGCGACACCAT
CCACCACCGAACCCACCTCCGACCAAGAAGACCCCTACCCACCGGAACTC
CTGAACAACCTCATCTTCCGCTACGAAGAACCCAGCATCCACAGCCGCTG
GGACAAGCCCCTCTTCACCGTCCCCTGGACCGACGCATCCCCCCCAATCG
CCGAAATCTGGACAGCCCTAACCGGCATCCCGCACCCTTCAGCAACAACA
ACCCCCGAGCCCGCCTCCATATCAAACCTCACCTCAGCCCTCAATACCAC
CTCTCTCTCCTCAGCAGCAAGCACCACGACCACAACAGCTACCCCCTCCA
CATTCCGCACCAACCGTCCCAAAATCAAACCCCACCAAGCAACCGCCCTC
CCCGCCGCCACAGACTCCACAGCCCTCTACAACATGGAAAAGCGCACCTC
AGCCATCGTCTCCGCCATCCGCACCTTCACGCTCTCCAACCCCTCCGCTG
AAGCCGCCCTCGCGCAGAGCCAAGACGGCAGCAGCAGCAGCAGTGGACGG
GGAATAACCATCCCCGTCCCGGAGGCGTCCATGCCCGTTTATGTTCCGGC
GCATGTGGCGACGTCCGGCACGACGGATGAATTAGCCGGCGCGGGCGGCA
TCCTGGCGCTGCCGAGACTGCAGCGGTTGAGGAGGCAGTGGATTGCGTTG
AATCGGGCGTATGTGCAGGGGGCGCATGCGTCGAGTAAGGGCGGGTTGAG
TGCGGAGCAGGTTCCTGATGCGTTTGTGCGGTTTTTGAATGCGGAGTTTG
GGGCGGAGAGTGACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299051M747DRAFT_299051Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299051-T1M747DRAFT_299051-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299051-T1.utr5p1M747DRAFT_299051-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299051-T1.exon1M747DRAFT_299051-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_299051-T1.exon2M747DRAFT_299051-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299051-T1.exon3M747DRAFT_299051-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299051-T1.cdsM747DRAFT_299051-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299051-T1.utr3p1M747DRAFT_299051-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263L9T
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR013641
DBxrefPFAM:PF08433
ProductRNA polymerase II Elongator complex associated protein Kti12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851943.1supercontigKZ851943.1:200282..201948 +
Powered by Drupal