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M747DRAFT_299220-T1, M747DRAFT_299220-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299220-T1
Unique NameM747DRAFT_299220-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851945.1:220884..222771-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299220-T1 ID=M747DRAFT_299220-T1|Name=M747DRAFT_299220-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1888bp|location=Sequence derived from alignment at KZ851945.1:220884..222771- (Aspergillus niger ATCC 13496)
TTCACATCTACCAAAGTATCTACTGCTTCTTTCCCCCCCCTCGACCTTCT
TAGAACTTCCCTCCTCACGTTCACGATCACGATCACGATTCCTCCTCCCC
CCGTATCTTCGTCACCTTCTATTCCTCACCTCGCCTCGACTACCGTCCTG
ACTGCTCCGCTCGCCGCGTCCCTGCTTGTACCCTCAATTAATCCTATCTA
GTAATTTTCAGACTTGGGTCCTGTGTCACTCGATCTCCCTGCATTGCTCG
GTACCTTCGCCCACGACCTCGAATCTCTTCTTCCTCCTCCTCCTCCCCTT
CGCAAAACTACCCGACCGCCGGATCCTGTGTCCCCGGCTGATGATCGCTC
GCTTTCTGGGCCGTCAGTAGCTATCTCCATGGATAACGCAAACCTCTGGA
CTCGCCGATCCAAGTACGTCCCACTCCGACACGATGACTTTGCCCGCATG
CTTGTGTGGCTGATGCGACTCAACTAACCTGTTTAATCTTTTGTTCCTAT
CTATAGCACCTCCAAGTTGTCTCTGTCTATGACGGGGACGGACGGCGCTC
GAGTTGAACTTCCCCGCGCCACCAAGCGTTTCGGCCCCGACAGCTCCCAC
GGCGGCCGGTCCAACCCTTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGT
GTCCTCTCCGTCTACAAACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTG
CCTTTGCGTCGTTTGGAACCCCCAAAACCCCCGGTGCACCTTCCGACCTG
AAAACTCCCGGCGAGAAGCGTGAAAACCCTGTCGACCAGGTTTCCGCTGC
TGAGGCCGGCAAACCTAAGGGCGCTGCCTTGACGCTCAAGGAGCACCCGC
TCAAGTCCACTTGGATTATCTGGTACCGGCCTCCCACACCTAAATACTCC
GATTACGAAAAGTCTACCGCTCCGCTTGCATCCATATCATCAGTAGAGAG
TTTCTGGTCGATCTATTCGCACCTAAAGAGGCCCTCTCTGCTCCCCACAG
TCTCCGACTACCATATCTTCAAAAAGGGCATCCGTCCGGTATGGGAGGAC
GAGGCCAATAAGAGAGGTGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGT
TGCGGATCGCTACTGGGAGGATCTCCTCCTGGCTATGATCGGTGACCAGT
TTGCAGAGGCTAGTGATGAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGC
GGGGAGGATGTTCTGAATGTGTGGACCCGCATCGATGGCGGGCGGAACAT
CAAGATCAGGTATGTCATACGTGGACACATCCCGTTGGAAGTGACATCGC
AAGTTTACTAACGTGTTCTGCAGAGAGACAATCAAACGTCTGCTGAACTT
CCCGGCCGACACCAATATCGTCTGGAAGAGTCATGACGACAGTATCGCCC
AACGTTCGGCCATCGACCAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCC
GGTCATCACCACCATCACCATCACCATCACCACCACCACAACAACAACAA
CAACCACAATCACAACCAGCAAAACCAGCTGGGCGATCGACGAAGAGTTA
CGGCGAATGACGAGGGGGATAAAGGAAAAGGCACGACATCTTGACATGCT
TTACGTGGGTTATGATCCTGTATAGTAAAGGCCACACAAAAATCTCATTG
GGATGATTTGGGATCGGGGCATTTAGGGCGAAATACTGAGTGATCTCGAT
TTGGGTTTTTATTCTTTTTTTTTAACTTTTTTTTTCTGTCCATTTTATGT
CAATTCATGGGCGCTGCTACTGCACGTGGAACTGCAAGTTTGGGGTGCTC
GGATGGGATGAAGCGTAACTACTTTTATTACTGCTATACTTAGTATCTTC
TACTTCTACTTCCTCATCTGCATGAAATGTGATTGGAG
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Coding sequence (CDS) from alignment at KZ851945.1:220884..222771-

>M747DRAFT_299220-T1 ID=M747DRAFT_299220-T1|Name=M747DRAFT_299220-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3177bp|location=Sequence derived from alignment at KZ851945.1:220884..222771- (Aspergillus niger ATCC 13496)
AGAGACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCT
GGAAGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCT
CGCCAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCA
CCATCACCACCACCACAACAACAACAACAACCACAATCACAACCAGCAAA
ACCAGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAA
GGAAAAGGCACGACATCTTGACACCTCCAAGTTGTCTCTGTCTATGACGG
GGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAGCGTTTCGGC
CCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGCCCTCTCCCC
CCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCTCTGCATTCG
GCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAAACCCCCGGT
GCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAACCCTGTCGA
CCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTGCCTTGACGC
TCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTACCGGCCTCCC
ACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCTTGCATCCAT
ATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAAAGAGGCCCT
CTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAGGGCATCCGT
CCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATGGGTGGTGAG
GCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCCTCCTGGCTA
TGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGTGGTGCGGTG
CTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGACCCGCATCGA
TGGCGGGCGGAACATCAAGATCAGATGGATAACGCAAACCTCTGGACTCG
CCGATCCAAAGAGACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCA
ATATCGTCTGGAAGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATC
GACCAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCA
TCACCATCACCATCACCACCACCACAACAACAACAACAACCACAATCACA
ACCAGCAAAACCAGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAG
GGGGATAAAGGAAAAGGCACGACATCTTGACACCTCCAAGTTGTCTCTGT
CTATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAG
CGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGC
CCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCT
CTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAA
ACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAA
CCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTG
CCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTAC
CGGCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCT
TGCATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAA
AGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAG
GGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATG
GGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCC
TCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGT
GGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGAC
CCGCATCGATGGCGGGCGGAACATCAAGATCAGATGGATAACGCAAACCT
CTGGACTCGCCGATCCAAAGAGACAATCAAACGTCTGCTGAACTTCCCGG
CCGACACCAATATCGTCTGGAAGAGTCATGACGACAGTATCGCCCAACGT
TCGGCCATCGACCAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCCGGTCA
TCACCACCATCACCATCACCATCACCACCACCACAACAACAACAACAACC
ACAATCACAACCAGCAAAACCAGCTGGGCGATCGACGAAGAGTTACGGCG
AATGACGAGGGGGATAAAGGAAAAGGCACGACATCTTGACACCTCCAAGT
TGTCTCTGTCTATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGC
GCCACCAAGCGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCC
TTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAA
ACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGA
ACCCCCAAAACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAA
GCGTGAAAACCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTA
AGGGCGCTGCCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATT
ATCTGGTACCGGCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTAC
CGCTCCGCTTGCATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATT
CGCACCTAAAGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATC
TTCAAAAAGGGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGG
TGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGG
AGGATCTCCTCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGAT
GAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAA
TGTGTGGACCCGCATCGATGGCGGGCGGAACATCAAGATCAGATGGATAA
CGCAAACCTCTGGACTCGCCGATCCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299220M747DRAFT_299220Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299220-T1M747DRAFT_299220-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299220-T1.cdsM747DRAFT_299220-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299220-T1.utr3p1M747DRAFT_299220-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299220-T1.exon3M747DRAFT_299220-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_299220-T1.exon2M747DRAFT_299220-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299220-T1.exon1M747DRAFT_299220-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299220-T1.utr5p1M747DRAFT_299220-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519451.3
DBxrefInterPro:IPR019770
DBxrefInterPro:IPR023398
DBxrefInterPro:IPR001040
DBxrefPFAM:PF01652
ProductIF4E-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851945.1supercontigKZ851945.1:220884..222771 -
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