|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851957.1:120194..122035- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_299857-T1 ID=M747DRAFT_299857-T1|Name=M747DRAFT_299857-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1842bp|location=Sequence derived from alignment at KZ851957.1:120194..122035- (Aspergillus niger ATCC 13496)
GAAAAAGTCTTGATTTACTTTTCAGCTGAACTCTTTTTGTGAACTCTTGT
GTGTTCTTCTTGTGTCAACCATTGTGCCAGGGTTTATGTGGGGTATTGAA
TAAGTTCCCTTTGATAACGATCCAGAATCTGAAGGAACTCTTTTTTATCT
GCCCTTAATTTTTTTTCTATTTGCTTCCGGGTAGTGACGACATTAGCCCT
TTTTTTTTTGGCCCGCCGCTCCGTTCTCCGACTTGGTTCTTTCCACGCCC
GTCGGTGCTTTGCGTACCTGCGTGTTTGCTGCTCTCGGCTTTTTGCTGTT
TGCCTCCAGCTTTCCCTAGATTCGCCTCTTCAGGGGCGACTAGTGTCGTT
GCTTTTCTCTCTCCTTTTTGGAAGACCCAATCTTGCTTCGTCTTTCAATT
ATACTCGGCTTACTGCTATCATCATGGCTTCAAGATTCTCGGCGCAATTG
CTAGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCC
CGTCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAA
CAGAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCG
GCCAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAA
GAAAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCC
ATGTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGTTTG
GCCATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGA
GATGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCA
CGGTTCGTTATTCTTACCGTCCTTCTTGAGTCTGTCGAGATTAACGTGTG
ATTTCGGCGCAGGTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCC
CGAGCAGGCTGTTCAGTCTGCCATCCGCATCGCGAAGGAGGGTCGCGTTC
AGGCTATCAAGCTCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGT
ATCACGCAGGCCGGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCA
ACGTCAACACGCTCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCA
GCGCAGTGAGGCTGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCA
TTCATGATGGTTCTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTAC
TAAGAAGTTGCGTATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCT
CCGGACAAGTCCTGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGC
CGGTTCCTTCCCAAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGC
TATCAAAGGAATTCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATC
CTTCCGAAGAATACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTT
GAAAAGGCCATTGAACACTTCGGCAAGGACTAATTGCTCGCGACCCCGAC
TCAGAGCCATATTGTCTCATCCTGTGAGCGTTCACTGATAAATCTTTTTT
TTTTCTCAAGCATAATATCATGCATATCATGTCCAGCAAGTCGTTTCAGT
GATACCTTGGTATTTCGTGTTCATGTTCAAAATTCTTATATATTGTCAAA
TAAACTTTGACAATTTTTGTGCACAGTTGCCTTTCTAATTTCATTCCATG
TTAGCTTGGAGAGGCAGATTTGGTTTAGGAAGATTACCTGTAAATAGTCA
AGACAGCTGTTGCACTAATACACATCGACCTTTGCTCCCCAT back to topCoding sequence (CDS) from alignment at KZ851957.1:120194..122035- >M747DRAFT_299857-T1 ID=M747DRAFT_299857-T1|Name=M747DRAFT_299857-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2100bp|location=Sequence derived from alignment at KZ851957.1:120194..122035- (Aspergillus niger ATCC 13496)
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGCGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAACACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGTTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGCGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAACACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGTTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015940 | pantothenate biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263FTE |
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR003700 |
| DBxref | InterPro:IPR040442 |
| DBxref | PFAM:PF02548 |
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851957.1 | supercontig | KZ851957.1:120194..122035 - |
|
