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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851969.1:48932..50202+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_300176-T1 ID=M747DRAFT_300176-T1|Name=M747DRAFT_300176-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1271bp|location=Sequence derived from alignment at KZ851969.1:48932..50202+ (Aspergillus niger ATCC 13496)
TTCATCCCTCATACCTCTCATCCTACCACTCACCTTCCGCGCATCGCCAT
CTGCGATCCTCCCCACAACACTCCACCTAGATACATACACCGTTAACTGC
GCTTCTACAACATGCAGATCTTCGTTAAGACCCGTGAGTATCCCTAACCA
TTTCTCAAGCTTAGCATCAGGAATCCATCATCTGACTGTTTGTTTCCATC
TAGTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATC
GACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCA
GCAGCGTCTGATCTTCGCGGGAAAGCAGCTGGAGGATGGCCGCACGCTTA
GTGACTACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTG
CGTGGTGGTATGCAGATTTGTAAGTTGTCCTGAACTCTATTTGCCACCCT
GTTGGCCACCTTCACTTGGACCATATACTGACCTCATATTAGTCGTCAAG
ACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCAT
CGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACC
AGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTG
TCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCT
GCGTGGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCA
CATTGGAAGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATT
CAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTCGCTGG
TAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAG
AATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTC
GTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGA
TACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCC
CGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGT
ACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCT
CCGTCTCCGTGGCGGAAACTAATGCCTTATTTTGATCTTTCTTCTTTAGC
ACGGCTCATCTACGGTTGAGTGGCCTGCATGGCGTTGGGACGGTTGTTTT
CATCGGTTTTTATGATACGGA back to topCoding sequence (CDS) from alignment at KZ851969.1:48932..50202+ >M747DRAFT_300176-T1 ID=M747DRAFT_300176-T1|Name=M747DRAFT_300176-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2754bp|location=Sequence derived from alignment at KZ851969.1:48932..50202+ (Aspergillus niger ATCC 13496)
ATGCAGATCTTCGTTAAGACCCTAACCGGCAAGACCATCACCCTCGAGGT
CGAGTCCAGCGATACCATCGACAACGTCAAGACCAAGATCCAGGATAAGG
AGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCGGGAAAGCAGCTG
GAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCT
CCATCTTGTCCTCCGCCTGCGTGGTGGTATGCAGATTTTCGTCAAGACCC
TGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC
AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCA
GCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTG
ACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGT
GGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATT
GGAAGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAG
ACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAG
CAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATC
CACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGA
AGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACC
ATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGA
CCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGC
TCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGT
CTCCGTGGCGGAAACTAAATGCAGATCTTCGTTAAGACCCTAACCGGCAA
GACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGA
CCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATC
TTCGCGGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACAT
CCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTATGC
AGATTTTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAG
TCTTCTGACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGG
CATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGG
ATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCAC
CTCGTCCTTCGTCTGCGTGGTGGTATGCAGATCTTCGTCAAGACTCTCAC
GGGAAAGACGATCACATTGGAAGTTGAATCTTCCGACACAATTGATAACG
TTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGT
CTCATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTA
CAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTG
GTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAG
GTGGAGAGCTCGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAA
GGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGT
TGGAAGATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACT
CTGCACCTGGTGCTCCGTCTCCGTGGCGGAAACTAAATGCAGATCTTCGT
TAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATA
CCATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCC
GACCAGCAGCGTCTGATCTTCGCGGGAAAGCAGCTGGAGGATGGCCGCAC
GCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCC
GCCTGCGTGGTGGTATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACC
ATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGAAGACCAA
GATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCG
CTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAA
AAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTATGCAGAT
CTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTT
CCGACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATC
CCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGG
CCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTG
TCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAGACTCTTACCGGC
AAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATAACGTCAA
GACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCA
TCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAAC
ATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGAAA
CTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR019954 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR019956 |
| DBxref | PFAM:PF14560 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF13881 |
| DBxref | PFAM:PF11976 |
| Product | Ubiquitin |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851969.1 | supercontig | KZ851969.1:48932..50202 + |
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