You are here

Home

ASPNIDRAFT_50109-T1, ASPNIDRAFT_50109-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_50109-T1
Unique NameASPNIDRAFT_50109-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1059800..1060255-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_50109-T1 ID=ASPNIDRAFT_50109-T1|Name=ASPNIDRAFT_50109-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=456bp|location=Sequence derived from alignment at ACJE01000001.1:1059800..1060255- (Aspergillus niger ATCC 1015)
ATGGAACAGCCACCCCCCGCCGATCAACCACAACAGCCTCCGCCTCCGAC
ACTCACAAATCCTCGCTTCACCCTCGAGCTAGAGTTTGTGTCTTCTCTCG
CCAATCCCTACTATCTGTCCCACCTCGCCGTGACATATCCGAACCTGCTG
GGCATAAACAAGTCTGGTGATGACAGCGACGTGAACAATGATTCCACAGA
CCCCGACGCGCAGGGATTTGCAGCGTACCTGGCCTACCTCTATTCCTACT
GGAAGACCCCCGAATACGCCCAGTTTCTGACCCATCCTGGTGCCACTTTG
CGGGCGCTACGACTACTGCAGGAGGAGACCTTCCGTCGCGACATTATTCG
TCCCGATGTCATTGAAAGGCTAGCAGGGACCGATATTGCCGCCGAACCCG
TCGACCCAGCTGCGGAGTCTGGAGACCAGGAGGGCGAGCAAGCCAAAGCA
AGCTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:1059800..1060255-

>ASPNIDRAFT_50109-T1 ID=ASPNIDRAFT_50109-T1|Name=ASPNIDRAFT_50109-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=456bp|location=Sequence derived from alignment at ACJE01000001.1:1059800..1060255- (Aspergillus niger ATCC 1015)
ATGGAACAGCCACCCCCCGCCGATCAACCACAACAGCCTCCGCCTCCGAC
ACTCACAAATCCTCGCTTCACCCTCGAGCTAGAGTTTGTGTCTTCTCTCG
CCAATCCCTACTATCTGTCCCACCTCGCCGTGACATATCCGAACCTGCTG
GGCATAAACAAGTCTGGTGATGACAGCGACGTGAACAATGATTCCACAGA
CCCCGACGCGCAGGGATTTGCAGCGTACCTGGCCTACCTCTATTCCTACT
GGAAGACCCCCGAATACGCCCAGTTTCTGACCCATCCTGGTGCCACTTTG
CGGGCGCTACGACTACTGCAGGAGGAGACCTTCCGTCGCGACATTATTCG
TCCCGATGTCATTGAAAGGCTAGCAGGGACCGATATTGCCGCCGAACCCG
TCGACCCAGCTGCGGAGTCTGGAGACCAGGAGGGCGAGCAAGCCAAAGCA
AGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SOH1ASPNIDRAFT_50109Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50109-T1.cdsASPNIDRAFT_50109-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50109-T1.exon1ASPNIDRAFT_50109-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50109-T1ASPNIDRAFT_50109-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265KF9
DBxrefInterPro:IPR008831
DBxrefInterPro:IPR038089
DBxrefPFAM:PF05669
Productsuppressor of hpr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1059800..1060255 -
Powered by Drupal