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ASPNIDRAFT_56889-T1, ASPNIDRAFT_56889-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56889-T1
Unique NameASPNIDRAFT_56889-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1415933..1417090-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56889-T1 ID=ASPNIDRAFT_56889-T1|Name=ASPNIDRAFT_56889-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1158bp|location=Sequence derived from alignment at ACJE01000001.1:1415933..1417090- (Aspergillus niger ATCC 1015)
ATGCACCCCCTCCGCCAGACCTCCTTCCCCAACACCATCGACGCAGACAC
GCGCACCTACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGTAGCC
TGGGCGGGACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGC
GGCAGGAAGAGTAAAGCGGAGAAGGAGCGCGAGAGAGAAGAAGGGAGTTT
GCGGGCGGGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAG
TGAGGGGTGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGAT
GCAGATGAGGATGAGGATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGA
AGAGGGGACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTATGCAT
CCCTCCTTTTGGACGACTCTATATCTGGCTTGTGGGCGAAGTTGCTAACT
GGTTCTGGTGTAGGTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAG
CGATATGACCTGTTCAAACGAGCCAAATTACGAAAGGAGACGCTACGACG
TATTGTCAATCATGCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAA
CGATTAATGGCTTTACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCT
CGTACCGTGCAGGCGGAGTGGGCTATCGCTCATGATCAGGCGGCTTTGGC
TGCAATTGAAGCTGAACAGGCGACGACAACAACAACGACAACCACAACAC
CTGGGGGTATTAAGCAGGAGCCCATGGAAAGGAGGCCCATGTCTACGCCT
ATGGGGAAGAAGGATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTT
GCTGCCCTCGCATCTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAG
AGGGTGGAGGCGTAGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTG
CGAGGGTCGGTGACTTGGTCGGCGGGTAGTGTTGGCGGACGGCGCATCTT
CCGGTAATGGAATATGGATCTGGTTATGGTAAAGCTGGGAGCGCAGAGGT
GAGCGTGGATAGCAGAATGGTGGCTGAAATACTGAGAAAGACCACTGCAG
TAATGATAGTATCATAATAAATGATGATAGACGGATTGTCTATAGTTACT
GAATACTG
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Coding sequence (CDS) from alignment at ACJE01000001.1:1415933..1417090-

>ASPNIDRAFT_56889-T1 ID=ASPNIDRAFT_56889-T1|Name=ASPNIDRAFT_56889-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1872bp|location=Sequence derived from alignment at ACJE01000001.1:1415933..1417090- (Aspergillus niger ATCC 1015)
GTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAGCGATATGACCTGT
TCAAACGAGCCAAATTACGAAAGGAGACGCTACGACGTATTGTCAATCAT
GCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTT
TACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGG
CGGAGTGGGCTATCGCTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCT
GAACAGGCGACGACAACAACAACGACAACCACAACACCTGGGGGTATTAA
GCAGGAGCCCATGGAAAGGAGGCCCATGTCTACGCCTATGGGGAAGAAGG
ATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCAT
CTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGT
AGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGA
CTTGGTCGGCGGGTAGTGTTGGCGGACGGCGCATCTTCCGGTAAATGCAC
CCCCTCCGCCAGACCTCCTTCCCCAACACCATCGACGCAGACACGCGCAC
CTACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGTAGCCTGGGCG
GGACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGG
AAGAGTAAAGCGGAGAAGGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGC
GGGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGG
GTGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGAT
GAGGATGAGGATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGG
GACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTTGTTGGTGGATG
CATTCAATCCCATCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAA
TTACGAAAGGAGACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTC
TGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTG
CGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGGGCTATC
GCTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGCGACGAC
AACAACAACGACAACCACAACACCTGGGGGTATTAAGCAGGAGCCCATGG
AAAGGAGGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCT
CCGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCT
GCGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTC
TGAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGT
AGTGTTGGCGGACGGCGCATCTTCCGGTAAATGCACCCCCTCCGCCAGAC
CTCCTTCCCCAACACCATCGACGCAGACACGCGCACCTACAGCGATGCCG
GCAGCGTGACGGGCAGCTTTACAGGTAGCCTGGGCGGGACCAGCGCAGAT
GGGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGA
GAAGGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGAC
TGGGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGGTGGTGCTTCTGGC
GGTGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATGAGGATGAGGATTT
TGATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGGACGACGGATACGG
AGGCGGAGAAGAAGAATATGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56889ASPNIDRAFT_56889Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56889-T1ASPNIDRAFT_56889-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56889-T1.cdsASPNIDRAFT_56889-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56889-T1.utr3p1ASPNIDRAFT_56889-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56889-T1.exon2ASPNIDRAFT_56889-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56889-T1.exon1ASPNIDRAFT_56889-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.9
NoteBUSCO:EOG09264VRO
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR006809
DBxrefPFAM:PF04719
ProductTAF11 protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1415933..1417090 -
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