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ASPNIDRAFT_56871-T1, ASPNIDRAFT_56871-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56871-T1
Unique NameASPNIDRAFT_56871-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1566466..1568115-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56871-T1 ID=ASPNIDRAFT_56871-T1|Name=ASPNIDRAFT_56871-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1650bp|location=Sequence derived from alignment at ACJE01000001.1:1566466..1568115- (Aspergillus niger ATCC 1015)
CCCTCTTCTTCATCCATACATACATACTTCCTGCTCCTACCGTACATATA
CTCAAACCTTCCCCCGGAGCTACCTGCTTACTTGGCCTGTCCTCCTCACC
AGTGACTTCTCCATCCGAACAACAAAACCGCTCTTCCCTACTCTCAACCC
ATTTCGCTCTGGTCGTTCGTCCTTGACGTTCCGGACCTGCAGACTATCTT
TCGATTCTTCGTGATCCCTTAAGGCGACGAAGCCCCCAGATTTCCCTTGG
TCAGGGCCCCTTTCAGCGCTCCCAAGGTCAGACATGTCTACCGCTACTGC
CGCGACGGCCGCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGT
TCAGCAACCTGCTACGTATGTAATCTCTGCTGCAACCCCCGGACGGTTAG
CTTTTGAGGGAAACTGGTTCTGATGGCATATGTTACAGTGGGTGCTGGAT
TGAACCTCTTCGAGTATGTTTTCCCTTCTCACCTGCTCCCAATCTATGCA
CCGTGCGTTTCCCTAACTAACATGGAATAGGGTCACCACTTTGGGTCAGG
TACGAAGCAATAACCGAGGCGGCAATTGTCGGCTTATGCTAACTCAGTTC
CTATAGCCGCTGGAAGTGATCAAGACGACCATGGCTGCAAACCGGGGCGA
TAGCTTCGCTGGTGCTATGGGTCGAATTTGGGGCCGTGGCGGGATCCTCG
GTTGTAAGTGCTCCTTCCGCCTTGTTCGCTTTTTCCGACTAGTGTGGGGT
GGCATTGTCTGACACTAGTCACCTACTTTAGATTATCAAGGTCTCATTCC
GTGGGCCTGGATTGAGGCCTCCACTAAGGGCGCCGTCCTCCTCTTCGTCG
CATCGGAGGCGGAATTCCGTGCCAAGGTGCTTGGTGCGCCCGACTTCGCC
GCCGGTATCGCTGGAGGTATGGTCGGTGGTATTGCACAGGCATACGCGAC
CATGGGCTTCTGTACCTGCATGAAGACAGTCGAGATCACCAAGCATAAGA
TGGCCGCCCAGGGCGTCAAGCCCCCCAGCACCTTCGCGACTTTCATGGAT
ATCTACCGCAAGGAGGGCATTCGTGGTATCAACCGTGGTGTCAACGCCGT
TGCCATTCGCCAGACCACCAACTGGGGATCCCGCTTCGGTTTCTCTCGCC
TGGCTGAAACCGCTATTCGCAGGGTCACCAACAAGGAGGAGGGTCAGAAG
CTCAATGCATTTGAGAAGATCCTGGCTTCCGGTCTCGGTGGTGGTCTCTC
TGCCTGGAACCAGCCCATTGAGGTGATCCGTGTCGAGATGCAGAGCAAGA
CTGATGACCCCAACCGCCCCAAGAACCTTACCGTGGGCAAGGCCGCCAAG
TACATCTACGACAACAACGGCATCAAGGGATTGTACCGGGGTGTGGCTCC
CCGTGTGGGTCTGGGAATCTGGCAGACCGTCTGCATGGTGGCACTTGGTG
ACATGTAAGTGGAACAAACTTTCCCCTCTCTTGCATTATCAATACCCCGG
GCGGAGCACTTCCTATGGGGGTGGCGCCCCGATCTTCATGTGATAACCGA
GGAGTGAACTGGAGCTAACGTGTGGGTCTCCGTTACCCCGAACAGGGCCA
AGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAGCACTAG
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Coding sequence (CDS) from alignment at ACJE01000001.1:1566466..1568115-

>ASPNIDRAFT_56871-T1 ID=ASPNIDRAFT_56871-T1|Name=ASPNIDRAFT_56871-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5706bp|location=Sequence derived from alignment at ACJE01000001.1:1566466..1568115- (Aspergillus niger ATCC 1015)
GGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAGC
ACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACTA
AGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAAG
GTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCGG
TGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAGA
CAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCCC
AGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTGG
TATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGGG
GATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGTC
ACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGGC
TTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTGA
TCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAAC
CTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCAA
GGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAGA
CCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGACGA
CCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAATT
TGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGGTG
CTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGCCA
CTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGCTA
CGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAG
CACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACT
AAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAA
GGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCG
GTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAG
ACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCC
CAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTG
GTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGG
GGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGT
CACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGG
CTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTG
ATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAA
CCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCA
AGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAG
ACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGACG
ACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAAT
TTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGGT
GCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGCC
ACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGCT
ACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAA
GCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCAC
TAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCA
AGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTC
GGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAA
GACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCC
CCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGT
GGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTG
GGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGG
TCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTG
GCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGT
GATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGA
ACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATC
AAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCA
GACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGAC
GACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAA
TTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGG
TGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGC
CACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGC
TACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTA
AGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCA
CTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCC
AAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGT
CGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGA
AGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCC
CCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCG
TGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACT
GGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGG
GTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCT
GGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGG
TGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAG
AACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCAT
CAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGC
AGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGA
CGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGA
ATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGG
GTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCG
CCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTG
CTACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCT
AAGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCC
ACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGC
CAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGG
TCGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATG
AAGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCC
CCCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTC
GTGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAAC
TGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAG
GGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCC
TGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAG
GTGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAA
GAACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCA
TCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGG
CAGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAG
ACGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCG
AATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTG
GGTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCC
GCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCT
GCTACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGC
TAAGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTC
CACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTG
CCAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATG
GTCGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCAT
GAAGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGC
CCCCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATT
CGTGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAA
CTGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCA
GGGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATC
CTGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGA
GGTGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCA
AGAACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGC
ATCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTG
GCAGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAA
GACGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTC
GAATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGT
GGGTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGC
CGCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACC
TGCTAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YHM2ASPNIDRAFT_56871Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56871-T1ASPNIDRAFT_56871-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56871-T1.cdsASPNIDRAFT_56871-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56871-T1.exon6ASPNIDRAFT_56871-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56871-T1.exon5ASPNIDRAFT_56871-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56871-T1.exon4ASPNIDRAFT_56871-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56871-T1.exon3ASPNIDRAFT_56871-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56871-T1.exon2ASPNIDRAFT_56871-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56871-T1.exon1ASPNIDRAFT_56871-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56871-T1.utr5p1ASPNIDRAFT_56871-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09263HD8
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefPFAM:PF00153
ProductMitochondrial DNA replication protein yhm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1566466..1568115 -
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