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ASPNIDRAFT_53863-T1, ASPNIDRAFT_53863-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53863-T1
Unique NameASPNIDRAFT_53863-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1202200..1203273+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53863-T1 ID=ASPNIDRAFT_53863-T1|Name=ASPNIDRAFT_53863-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1074bp|location=Sequence derived from alignment at ACJE01000002.1:1202200..1203273+ (Aspergillus niger ATCC 1015)
ATGCCTCGTTCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAA
AAAGTCCCACAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAAT
GCATTGAGAAGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGC
AACACCTATCTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGGTTAGT
CTTCTCTCTCCCCAGCAACCCCCGCCTATCCCCAAGATGCCCCTCCACTC
CAACAACCATGCATGCAAACTAACCACCTGAGCAGTCTCTTCTTCGGCAA
AACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAAACGAAGCCG
CGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCCGTCGGTCTC
CTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTTCGAGTCCTT
CCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCCGGGCGTTCT
CGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATCCCCGTCTCC
GAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCGTAAACTCGG
TGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGTTGACGGAGG
GTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTGGATTCGAGG
CAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGAGTTCCATGT
TGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGGAGATTCTGG
AGAAGGATGAGGCTGGTATGGAGGTTGAGTAAGTTCGAGGTTGTTGATGC
TTTGGAAAAGTTTCGATTCGGTTTTTTAGAGTTGGGGTGCTGGTGGTGGT
GTTCCTGTCGGTGTTGGGTCGCGGTAGGTTTTCTTTCCAAAAAAGGAAAC
CTATCTATCTATATTTGGACTTGGAAAAGGCCAGGCCTGATACCCATGGA
TTCCCACCCTCCCCTTTGATGATGAGATCCCCTGGGCATCTTTGGAGTTG
GGTTAAGGCGTTTTCTTTCATTCT
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Coding sequence (CDS) from alignment at ACJE01000002.1:1202200..1203273+

>ASPNIDRAFT_53863-T1 ID=ASPNIDRAFT_53863-T1|Name=ASPNIDRAFT_53863-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1482bp|location=Sequence derived from alignment at ACJE01000002.1:1202200..1203273+ (Aspergillus niger ATCC 1015)
ATGCCTCGTTCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAA
AAAGTCCCACAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAAT
GCATTGAGAAGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGC
AACACCTATCTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGTCTCTT
CTTCGGCAAAACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAA
ACGAAGCCGCGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCC
GTCGGTCTCCTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTT
CGAGTCCTTCCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCC
GGGCGTTCTCGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATC
CCCGTCTCCGAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCG
TAAACTCGGTGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGT
TGACGGAGGGTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTG
GATTCGAGGCAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGA
GTTCCATGTTGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGG
AGATTCTGGAGAAGGATGAGGCTGGTATGGAGGTTGAGTAAATGCCTCGT
TCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAAAAAGTCCCA
CAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAATGCATTGAGA
AGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGCAACACCTAT
CTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGTCTCTTCTTCGGCAA
AACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAAACGAAGCCG
CGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCCGTCGGTCTC
CTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTTCGAGTCCTT
CCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCCGGGCGTTCT
CGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATCCCCGTCTCC
GAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCGTAAACTCGG
TGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGTTGACGGAGG
GTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTGGATTCGAGG
CAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGAGTTCCATGT
TGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGGAGATTCTGG
AGAAGGATGAGGCTGGTATGGAGGTTGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000027ribosomal large subunit assembly
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53863ASPNIDRAFT_53863Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53863-T1.exon1ASPNIDRAFT_53863-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53863-T1.exon2ASPNIDRAFT_53863-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53863-T1.cdsASPNIDRAFT_53863-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53863-T1.utr3p1ASPNIDRAFT_53863-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53863-T1ASPNIDRAFT_53863-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.4
NoteantiSMASH:Cluster_10000021.5
NoteBUSCO:EOG09264W46
DBxrefInterPro:IPR033867
DBxrefInterPro:IPR040637
DBxrefInterPro:IPR001790
DBxrefPFAM:PF17777
DBxrefPFAM:PF00466
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1202200..1203273 +
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