You are here

Home

ASPNIDRAFT_53882-T1, ASPNIDRAFT_53882-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53882-T1
Unique NameASPNIDRAFT_53882-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1369379..1370163-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53882-T1 ID=ASPNIDRAFT_53882-T1|Name=ASPNIDRAFT_53882-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=785bp|location=Sequence derived from alignment at ACJE01000002.1:1369379..1370163- (Aspergillus niger ATCC 1015)
CTGTCCTATGCCTGCCTGGCTACTACCTGCCTAATATCTATCCATCCATC
TATCTATTCAAAGTCTCATACTGTCTACTGTCACTTAACTACCTCCATAC
CGATCTTCCTCTGCTATTATATCTCCCCACAGACAATTCCCATCACAGTT
CCATACCACCACCCTATCTCCTCCATTTCCACCTCAACTAGCTCCATACC
AACTCCCAAAAATGAGTATCGGCAAGATCATCGGAAAGATCATCATTATC
CCAATCCTCGTCATTATCTTCATCTGCGTCTGCATCTACTTCCTCATCAA
GCATCGTCGCGACCGCAAGCGCGAACGCCGCGAAGATAATCTCCGTGCCC
AATACTACCGGCAACAGTTCCAGCAGCAGTACATGTATCCACATACACAG
ATGCAACCGCAACAACAACAGCAACAGCCGGGCACGCCGGCCCCGCCTTA
CTATAATCATGCTTATGCTGTGGGGCAGCAGCCCGTGGCGATGAACGAAG
GAGAATATGGATACTCGGAATCGATGATGAAGAAGCCGGAGCCGGTGGTT
TATCCGGTGCAGCAGCAGCATCCGGGTTCGGAGGTGGTTTAGTTAGGATT
GTTTTGGGTTTGGTGTAAGTTTACTGTCCATTGAATAAAGGTCTTTATGT
ATGGATGGAAGTGCTAATGTTGGTTAGGGGCTTATAGGTGTTATACTTTT
TTGTTTGGTTGTTCGTTGGATATGCTTCTAAGTGACTTGATACCTGTATT
GTTTTTGTTGGGTATATTTTGTTGATTGGCTTTGG
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1369379..1370163-

>ASPNIDRAFT_53882-T1 ID=ASPNIDRAFT_53882-T1|Name=ASPNIDRAFT_53882-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=381bp|location=Sequence derived from alignment at ACJE01000002.1:1369379..1370163- (Aspergillus niger ATCC 1015)
ATGAGTATCGGCAAGATCATCGGAAAGATCATCATTATCCCAATCCTCGT
CATTATCTTCATCTGCGTCTGCATCTACTTCCTCATCAAGCATCGTCGCG
ACCGCAAGCGCGAACGCCGCGAAGATAATCTCCGTGCCCAATACTACCGG
CAACAGTTCCAGCAGCAGTACATGTATCCACATACACAGATGCAACCGCA
ACAACAACAGCAACAGCCGGGCACGCCGGCCCCGCCTTACTATAATCATG
CTTATGCTGTGGGGCAGCAGCCCGTGGCGATGAACGAAGGAGAATATGGA
TACTCGGAATCGATGATGAAGAAGCCGGAGCCGGTGGTTTATCCGGTGCA
GCAGCAGCATCCGGGTTCGGAGGTGGTTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53882ASPNIDRAFT_53882Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53882-T1ASPNIDRAFT_53882-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53882-T1.cdsASPNIDRAFT_53882-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53882-T1.utr3p2ASPNIDRAFT_53882-T1.utr3p2Aspergillus niger ATCC 1015three_prime_UTR
ASPNIDRAFT_53882-T1.utr3p1ASPNIDRAFT_53882-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53882-T1.exon2ASPNIDRAFT_53882-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53882-T1.exon1ASPNIDRAFT_53882-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53882-T1.utr5p1ASPNIDRAFT_53882-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1369379..1370163 -
Powered by Drupal