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ASPNIDRAFT_56619-T1, ASPNIDRAFT_56619-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56619-T1
Unique NameASPNIDRAFT_56619-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1376197..1378728+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56619-T1 ID=ASPNIDRAFT_56619-T1|Name=ASPNIDRAFT_56619-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2532bp|location=Sequence derived from alignment at ACJE01000002.1:1376197..1378728+ (Aspergillus niger ATCC 1015)
GCCACCATGAGAGGTTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCT
GTCCATGGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCCGATATGCTC
CCGTGTCCTGCGATCTGCGTTGTCGACAGGCTTTACCGTCTCATGTTGTG
TTGTTGAACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATT
GAAAGCGGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCAT
TTCAATGCAATAGCTCCACATCAATTCTGGTGGCTACTCTGGATGAGTAC
CGCCAAAGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTT
CTGGTTACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCA
GAGGAGCCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGA
AATTTTTCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTG
GGTGAATCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTG
GTGCGTCGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCT
GTTGAGCAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGT
CGTCAATAATGTCAATGCGAACGCGACATTACTGCTACCCGAGAATATGA
AAGGCCTGGGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATT
GGCATATCGCTGAACTTTGCTTCACCCGAAGACTTGGGTGGTTTGAATAC
TTATGATCCACTCGATCCAGGTGTCATTGCATGGTGGCAGAATATCACTG
ATAGTCTCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCC
GACTCAGAGGGCCAGCCAGGTCCAGATACATACAATCGCACACTCTCACA
AGGGGCAAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTA
TGTACCGTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAG
GCTGATCGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCA
ATTCGAGGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCC
AAGTGCGCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAAC
ACAGCCATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCA
TTTGGTGTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTAC
GCGTAGACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGC
TTCAACAGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAA
CAGAACATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACG
GTCGTTTGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGAC
TGGACTCGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTC
CGATATGTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACC
TGGGCATACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAAT
CCAGCTACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCA
TGATTCTGTCGGTATGGATCGCACAATACGGAACGGCACCGGCTATACCG
GTCAATACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACG
CCAGATGACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCT
GCACTCCGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGG
GCGCAGAAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGG
CTCATTGACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCA
GGCGGGACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACA
ACATGACCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGG
CGCATTGAAGCCGAGAGTATGAGATTAGATGGATACCAGACGTATACGGT
CAGTCCGTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTA
ATTCAACGACTGGGACGGCGAGGACTAGCATCAAGGCCCCATCAGGAGTA
TACGACATTGGGGTGAACTACTACGATCTCTATGGTGGTCAATCGAAGTG
GACACTATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGG
AGCATAATTCCCTAGGCCATACACCATCTATATACTTAGATGGTCACTCT
GCCACTCGGATTACGTTCCATGGGGTTGGCATTCGGCAGGGTGATCAGCT
GAAGATTGTTGGGGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATA
TAGTGCTACTGCCCCCAGGCTTAGTTGACTGA
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Coding sequence (CDS) from alignment at ACJE01000002.1:1376197..1378728+

>ASPNIDRAFT_56619-T1 ID=ASPNIDRAFT_56619-T1|Name=ASPNIDRAFT_56619-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2526bp|location=Sequence derived from alignment at ACJE01000002.1:1376197..1378728+ (Aspergillus niger ATCC 1015)
ATGAGAGGTTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCTGTCCAT
GGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCCGATATGCTCCCGTGT
CCTGCGATCTGCGTTGTCGACAGGCTTTACCGTCTCATGTTGTGTTGTTG
AACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATTGAAAGC
GGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCATTTCAAT
GCAATAGCTCCACATCAATTCTGGTGGCTACTCTGGATGAGTACCGCCAA
AGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTTCTGGTT
ACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCAGAGGAG
CCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGAAATTTT
TCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTGGGTGAA
TCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTGGTGCGT
CGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCTGTTGAG
CAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGTCGTCAA
TAATGTCAATGCGAACGCGACATTACTGCTACCCGAGAATATGAAAGGCC
TGGGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATTGGCATA
TCGCTGAACTTTGCTTCACCCGAAGACTTGGGTGGTTTGAATACTTATGA
TCCACTCGATCCAGGTGTCATTGCATGGTGGCAGAATATCACTGATAGTC
TCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCCGACTCA
GAGGGCCAGCCAGGTCCAGATACATACAATCGCACACTCTCACAAGGGGC
AAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTATGTACC
GTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAGGCTGAT
CGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCAATTCGA
GGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCCAAGTGC
GCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAACACAGCC
ATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCATTTGGT
GTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTACGCGTAG
ACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGCTTCAAC
AGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAACAGAAC
ATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACGGTCGTT
TGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGACTGGACT
CGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTCCGATAT
GTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACCTGGGCA
TACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAATCCAGCT
ACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCATGATTC
TGTCGGTATGGATCGCACAATACGGAACGGCACCGGCTATACCGGTCAAT
ACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACGCCAGAT
GACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCTGCACTC
CGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGGGCGCAG
AAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGGCTCATT
GACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCAGGCGGG
ACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACAACATGA
CCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGGCGCATT
GAAGCCGAGAGTATGAGATTAGATGGATACCAGACGTATACGGTCAGTCC
GTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTAATTCAA
CGACTGGGACGGCGAGGACTAGCATCAAGGCCCCATCAGGAGTATACGAC
ATTGGGGTGAACTACTACGATCTCTATGGTGGTCAATCGAAGTGGACACT
ATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGGAGCATA
ATTCCCTAGGCCATACACCATCTATATACTTAGATGGTCACTCTGCCACT
CGGATTACGTTCCATGGGGTTGGCATTCGGCAGGGTGATCAGCTGAAGAT
TGTTGGGGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATATAGTGC
TACTGCCCCCAGGCTTAGTTGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0046559alpha-glucuronidase activity
Vocabulary: Biological Process
TermDefinition
GO:0045493xylan catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56619ASPNIDRAFT_56619Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56619-T1.utr5p1ASPNIDRAFT_56619-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56619-T1.exon1ASPNIDRAFT_56619-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56619-T1.cdsASPNIDRAFT_56619-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56619-T1ASPNIDRAFT_56619-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH67
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR011100
DBxrefInterPro:IPR011099
DBxrefInterPro:IPR005154
DBxrefInterPro:IPR037054
DBxrefInterPro:IPR011395
DBxrefInterPro:IPR029018
DBxrefPFAM:PF03648
DBxrefPFAM:PF07488
DBxrefPFAM:PF07477
Productalpha-glucuronidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1376197..1378728 +
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