You are here

Home

ASPNIDRAFT_201784-T1, ASPNIDRAFT_201784-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_201784-T1
Unique NameASPNIDRAFT_201784-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1590503..1591747-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_201784-T1 ID=ASPNIDRAFT_201784-T1|Name=ASPNIDRAFT_201784-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1245bp|location=Sequence derived from alignment at ACJE01000002.1:1590503..1591747- (Aspergillus niger ATCC 1015)
TTCCAAGCATCGCTTGCAGCATTTCATGCAAGCGGCGAACAATCGTCGAA
TATCCCCCGAAAAAGCACCCCGTTGAGCTCCTACTTGCTTCTCCCACAAT
TTGTCAAGCCTCGCGACGATCCATTTACTCCTGACTATTTCCCCTTCATT
CCTAAAATCCAACCTTCAAATCGCTTCTTCTCATCACTCCTACGCCATGT
CTCCGTCAACCTTGCTCTCCCTCGGTTCCGCGATTCTAGCCGTGTTCCTC
TTCTGGACATTATCCTCAACCACGTCCTCACCCTTCGGCGGTGCATTCCC
ACGTCTATACAACAAGCGGATATGTCTGCTGATCGCCCACCCTGACGATG
AAGCCATGTTCTTCGCGCCCACGGTATTGGCCCTGACCAGGCCGGAATAC
GGCAACCACCTCAAGATCCTCTGCCTCAGCAGTGGTATGCGCCCACCGAT
ACCATCGAAGAAACACCCCCAATACACACACACTAACACCCACCTTGCGC
TATGATATAGGAGACGCCGACGGACTGGGCCACATCCGCAAAAAGGAGCT
CGTGAAAAGCGCCCTGCAACTGGGCCTACGCCAAGAATCGGACGTATACA
TCATCGACGACCCCTCCCGTTTCCGCGACAGCATGTCAATCCAGTGGACA
GAGTCCGACGTATCAGCTGTTCTCGAACACGCCTTTGCTCCTGAACTCAG
CGATAGCACCAATTCCAAGAAGAAGTCGAATAAAGCTGGCTCTGCACCTA
CGGCGACTATCGACGTGCTCTTGACCTTCGATAAGGGAGGTATCAGCAAC
CACTCTAATCACCGATCTCTGTACCACGGCGCTGTTCATTTCCTGCGTAC
CCTGATGAAGGACAAACCCGGGTATACCTGTCCGGTCACTCTGTATACGC
TCACCACGACGAATCTTCTGCGTAAGTACGCTGGTATTCTGGATGCGCCG
TTTACGATGGTTCGGGGCGCGCTGAACTCCCTAATTGGCCGTGGTGGGAG
CTCTAAGGGCCAGCTTCCTTCTCGGCTTCTGTTTGTCAGCTCCGTTAATG
AATGGATGACTGCGCAGTCGGCTATGGTCAAGGCACATCAGAGCCAGATG
GTGTGGTTCCGGTGGGGTTGGATTACGATTGGTCGGTACATGGTGGTGAA
TGACTTGAAGGCGGAGAAGATATGATGATGATGGAGCCTGGCTATTGACT
TAGCCAGTGACACTTTGATGATGCTTGGCGGGCTGATTGAATAGG
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1590503..1591747-

>ASPNIDRAFT_201784-T1 ID=ASPNIDRAFT_201784-T1|Name=ASPNIDRAFT_201784-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1806bp|location=Sequence derived from alignment at ACJE01000002.1:1590503..1591747- (Aspergillus niger ATCC 1015)
GAGACGCCGACGGACTGGGCCACATCCGCAAAAAGGAGCTCGTGAAAAGC
GCCCTGCAACTGGGCCTACGCCAAGAATCGGACGTATACATCATCGACGA
CCCCTCCCGTTTCCGCGACAGCATGTCAATCCAGTGGACAGAGTCCGACG
TATCAGCTGTTCTCGAACACGCCTTTGCTCCTGAACTCAGCGATAGCACC
AATTCCAAGAAGAAGTCGAATAAAGCTGGCTCTGCACCTACGGCGACTAT
CGACGTGCTCTTGACCTTCGATAAGGGAGGTATCAGCAACCACTCTAATC
ACCGATCTCTGTACCACGGCGCTGTTCATTTCCTGCGTACCCTGATGAAG
GACAAACCCGGGTATACCTGTCCGGTCACTCTGTATACGCTCACCACGAC
GAATCTTCTGCGTAAGTACGCTGGTATTCTGGATGCGCCGTTTACGATGG
TTCGGGGCGCGCTGAACTCCCTAATTGGCCGTGGTGGGAGCTCTAAGGGC
CAGCTTCCTTCTCGGCTTCTGTTTGTCAGCTCCGTTAATGAATGGATGAC
TGCGCAGTCGGCTATGGTCAAGGCACATCAGAGCCAGATGGTGTGGTTCC
GGTGGGGTTGGATTACGATTGGTCGGTACATGGTGGTGAATGACTTGAAG
GCGGAGAAGATATGAATGTCTCCGTCAACCTTGCTCTCCCTCGGTTCCGC
GATTCTAGCCGTGTTCCTCTTCTGGACATTATCCTCAACCACGTCCTCAC
CCTTCGGCGGTGCATTCCCACGTCTATACAACAAGCGGATATGTCTGCTG
ATCGCCCACCCTGACGATGAAGCCATGTTCTTCGCGCCCACGGTATTGGC
CCTGACCAGGCCGGAATACGGCAACCACCTCAAGATCCTCTGCCTCAGCA
GTGGAGACGCCGACGGACTGGGCCACATCCGCAAAAAGGAGCTCGTGAAA
AGCGCCCTGCAACTGGGCCTACGCCAAGAATCGGACGTATACATCATCGA
CGACCCCTCCCGTTTCCGCGACAGCATGTCAATCCAGTGGACAGAGTCCG
ACGTATCAGCTGTTCTCGAACACGCCTTTGCTCCTGAACTCAGCGATAGC
ACCAATTCCAAGAAGAAGTCGAATAAAGCTGGCTCTGCACCTACGGCGAC
TATCGACGTGCTCTTGACCTTCGATAAGGGAGGTATCAGCAACCACTCTA
ATCACCGATCTCTGTACCACGGCGCTGTTCATTTCCTGCGTACCCTGATG
AAGGACAAACCCGGGTATACCTGTCCGGTCACTCTGTATACGCTCACCAC
GACGAATCTTCTGCGTAAGTACGCTGGTATTCTGGATGCGCCGTTTACGA
TGGTTCGGGGCGCGCTGAACTCCCTAATTGGCCGTGGTGGGAGCTCTAAG
GGCCAGCTTCCTTCTCGGCTTCTGTTTGTCAGCTCCGTTAATGAATGGAT
GACTGCGCAGTCGGCTATGGTCAAGGCACATCAGAGCCAGATGGTGTGGT
TCCGGTGGGGTTGGATTACGATTGGTCGGTACATGGTGGTGAATGACTTG
AAGGCGGAGAAGATATGAATGTCTCCGTCAACCTTGCTCTCCCTCGGTTC
CGCGATTCTAGCCGTGTTCCTCTTCTGGACATTATCCTCAACCACGTCCT
CACCCTTCGGCGGTGCATTCCCACGTCTATACAACAAGCGGATATGTCTG
CTGATCGCCCACCCTGACGATGAAGCCATGTTCTTCGCGCCCACGGTATT
GGCCCTGACCAGGCCGGAATACGGCAACCACCTCAAGATCCTCTGCCTCA
GCAGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201784ASPNIDRAFT_201784Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201784-T1ASPNIDRAFT_201784-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201784-T1.cdsASPNIDRAFT_201784-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201784-T1.utr3p1ASPNIDRAFT_201784-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201784-T1.exon2ASPNIDRAFT_201784-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201784-T1.exon1ASPNIDRAFT_201784-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201784-T1.utr5p1ASPNIDRAFT_201784-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-27)
DBxrefInterPro:IPR003737
DBxrefInterPro:IPR024078
DBxrefPFAM:PF02585
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1590503..1591747 -
Powered by Drupal