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ASPNIDRAFT_54781-T1, ASPNIDRAFT_54781-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54781-T1
Unique NameASPNIDRAFT_54781-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:120963..122546+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54781-T1 ID=ASPNIDRAFT_54781-T1|Name=ASPNIDRAFT_54781-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1584bp|location=Sequence derived from alignment at ACJE01000003.1:120963..122546+ (Aspergillus niger ATCC 1015)
TTTGATTTCTTTCCCTCCCTTTTCCCTCCCCCCCGCCTCCATCCTTTCTC
ACTACCCCATCCCATCATGCCCGCCCCCTCCACCACCCTCCTCATCGAGG
GTTCTTTCACCGAGCTCGCCGACGAGTTCGCCCAGTACATCGACGCCCTG
CGCAAGTCCGAGGCCTCCAACAGCCTTCAGTCCGAGATTTCCCCGCTTCT
GCAGCCCCTTCGTGAGCAGGAACAGTCCGATGCAGAGCCCGACCGCAAGC
AGCGCGATGAGGTCCTCAAGAAGCTGGTCTCCGCGGCCGTTGTCCTGAAC
GGCGCCCCCGAGAAGGGTACGTATTATCGATAGACACCCCCTCCATACCA
TGAGACGTTGATCCTACAGAGACTGACGGACGGACGAATGAATTATACAG
AGATCATCTCCGCCTACAACCTTCTCGTCCACCTTGTCCACCAGGCCTCC
GACCCGGATATGTTCCTGTCGCGCATCTGCACCTACCTCGCCAAACCCAT
CTCCTCCTCCCCTCAGTTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCA
CCATCTTCAACACGCTTGCTCCCTCCGACTCCAGCCGCTACCACGTTCTC
CTGGCTACCGTCGCCGTCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGA
CGCCCTCAAGTCGCAGCTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCT
GGGAGCTGGACGCCGACGAGGCCCAGCGCCTGCACCTCGCCATTGCCGAT
GCCGCCCAGGCGTCCGGTGACCCCGAGTTGGCTCAAACCCACGTCGTCCA
GGCCCTGCAGACCATCCCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCG
ATCTGGCCGTCCGCGCCCTGACCTCCGCTCTCACCCACCCGGCTGTCTTC
GACTTCACCCCGCTGACTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAG
CGACAGCACCCTCTTTGAGCTGCTCGAGATCTTCACCGCCGATACCCTCG
ACGCCTACGAGGCCTTTGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGC
GGCGTGCTGGCTGAGGCCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCT
CACTCTGGCCTCCCTGGCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACG
CCACCATTGCCACGGCCCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGG
GTTATTGACACCATCCGCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCT
GCGCTCCGAGTTCCTGGTCCACCGGGCCACCTACCGTGTCTTTGGTGAGA
AGCAGTGGGCCGAGGTGCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTG
GAGAACGTGCTGGGTGTTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGA
GGGGCTGCAGGCGGCCCAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTA
ACGACAAGAAGGGTGGTGACCGTCGCCGTCACAACAACAACAACCAGAAC
CAGAACCAGCAGCAGCAGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCC
CGCCGCTGCCCCGGAGGCTGTTGCCGTGGAGTAA
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Coding sequence (CDS) from alignment at ACJE01000003.1:120963..122546+

>ASPNIDRAFT_54781-T1 ID=ASPNIDRAFT_54781-T1|Name=ASPNIDRAFT_54781-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2868bp|location=Sequence derived from alignment at ACJE01000003.1:120963..122546+ (Aspergillus niger ATCC 1015)
ATGCCCGCCCCCTCCACCACCCTCCTCATCGAGGGTTCTTTCACCGAGCT
CGCCGACGAGTTCGCCCAGTACATCGACGCCCTGCGCAAGTCCGAGGCCT
CCAACAGCCTTCAGTCCGAGATTTCCCCGCTTCTGCAGCCCCTTCGTGAG
CAGGAACAGTCCGATGCAGAGCCCGACCGCAAGCAGCGCGATGAGGTCCT
CAAGAAGCTGGTCTCCGCGGCCGTTGTCCTGAACGGCGCCCCCGAGAAGG
AGATCATCTCCGCCTACAACCTTCTCGTCCACCTTGTCCACCAGGCCTCC
GACCCGGATATGTTCCTGTCGCGCATCTGCACCTACCTCGCCAAACCCAT
CTCCTCCTCCCCTCAGTTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCA
CCATCTTCAACACGCTTGCTCCCTCCGACTCCAGCCGCTACCACGTTCTC
CTGGCTACCGTCGCCGTCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGA
CGCCCTCAAGTCGCAGCTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCT
GGGAGCTGGACGCCGACGAGGCCCAGCGCCTGCACCTCGCCATTGCCGAT
GCCGCCCAGGCGTCCGGTGACCCCGAGTTGGCTCAAACCCACGTCGTCCA
GGCCCTGCAGACCATCCCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCG
ATCTGGCCGTCCGCGCCCTGACCTCCGCTCTCACCCACCCGGCTGTCTTC
GACTTCACCCCGCTGACTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAG
CGACAGCACCCTCTTTGAGCTGCTCGAGATCTTCACCGCCGATACCCTCG
ACGCCTACGAGGCCTTTGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGC
GGCGTGCTGGCTGAGGCCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCT
CACTCTGGCCTCCCTGGCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACG
CCACCATTGCCACGGCCCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGG
GTTATTGACACCATCCGCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCT
GCGCTCCGAGTTCCTGGTCCACCGGGCCACCTACCGTGTCTTTGGTGAGA
AGCAGTGGGCCGAGGTGCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTG
GAGAACGTGCTGGGTGTTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGA
GGGGCTGCAGGCGGCCCAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTA
ACGACAAGAAGGGTGGTGACCGTCGCCGTCACAACAACAACAACCAGAAC
CAGAACCAGCAGCAGCAGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCC
CGCCGCTGCCCCGGAGGCTGTTGCCGTGGAGTAAATGCCCGCCCCCTCCA
CCACCCTCCTCATCGAGGGTTCTTTCACCGAGCTCGCCGACGAGTTCGCC
CAGTACATCGACGCCCTGCGCAAGTCCGAGGCCTCCAACAGCCTTCAGTC
CGAGATTTCCCCGCTTCTGCAGCCCCTTCGTGAGCAGGAACAGTCCGATG
CAGAGCCCGACCGCAAGCAGCGCGATGAGGTCCTCAAGAAGCTGGTCTCC
GCGGCCGTTGTCCTGAACGGCGCCCCCGAGAAGGAGATCATCTCCGCCTA
CAACCTTCTCGTCCACCTTGTCCACCAGGCCTCCGACCCGGATATGTTCC
TGTCGCGCATCTGCACCTACCTCGCCAAACCCATCTCCTCCTCCCCTCAG
TTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCACCATCTTCAACACGCT
TGCTCCCTCCGACTCCAGCCGCTACCACGTTCTCCTGGCTACCGTCGCCG
TCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGACGCCCTCAAGTCGCAG
CTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCTGGGAGCTGGACGCCGA
CGAGGCCCAGCGCCTGCACCTCGCCATTGCCGATGCCGCCCAGGCGTCCG
GTGACCCCGAGTTGGCTCAAACCCACGTCGTCCAGGCCCTGCAGACCATC
CCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCGATCTGGCCGTCCGCGC
CCTGACCTCCGCTCTCACCCACCCGGCTGTCTTCGACTTCACCCCGCTGA
CTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAGCGACAGCACCCTCTTT
GAGCTGCTCGAGATCTTCACCGCCGATACCCTCGACGCCTACGAGGCCTT
TGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGCGGCGTGCTGGCTGAGG
CCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCTCACTCTGGCCTCCCTG
GCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACGCCACCATTGCCACGGC
CCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGGGTTATTGACACCATCC
GCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCTGCGCTCCGAGTTCCTG
GTCCACCGGGCCACCTACCGTGTCTTTGGTGAGAAGCAGTGGGCCGAGGT
GCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTGGAGAACGTGCTGGGTG
TTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGAGGGGCTGCAGGCGGCC
CAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTAACGACAAGAAGGGTGG
TGACCGTCGCCGTCACAACAACAACAACCAGAACCAGAACCAGCAGCAGC
AGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCCCGCCGCTGCCCCGGAG
GCTGTTGCCGTGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54781ASPNIDRAFT_54781Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54781-T1.utr5p1ASPNIDRAFT_54781-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54781-T1.exon1ASPNIDRAFT_54781-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54781-T1.exon2ASPNIDRAFT_54781-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54781-T1.cdsASPNIDRAFT_54781-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54781-T1ASPNIDRAFT_54781-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027528
DBxrefInterPro:IPR040750
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
DBxrefPFAM:PF18005
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:120963..122546 +
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