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ASPNIDRAFT_46760-T1, ASPNIDRAFT_46760-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46760-T1
Unique NameASPNIDRAFT_46760-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:857246..859603-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46760-T1 ID=ASPNIDRAFT_46760-T1|Name=ASPNIDRAFT_46760-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2358bp|location=Sequence derived from alignment at ACJE01000004.1:857246..859603- (Aspergillus niger ATCC 1015)
ATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAACGGCGC
CGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCACCACCC
CCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCAACCAG
CCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTGACCGA
GGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTCCATCC
GTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCTACGTT
AACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTCAACTA
CACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCGTGACC
CCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTGGAC
AGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTCGGCAA
CATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAAGGGAT
ACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCATCAAG
CACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGCCACCA
CATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGCCAACT
TCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACGATGAG
TTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACCCTCAG
CCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTTCTCTA
CCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGGAGATC
CGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAGCGTGA
GGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGCTTCCA
AGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACATTGAT
GATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACCTCTGC
CAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGACTCTG
CTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCACCCCT
GAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCCTCCGA
GGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGGTAAGA
GCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAG
GCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTCTACGT
TGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGCTAGCA
TCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCGCTGGT
ATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGCCAGCA
GGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCAGCCCG
GTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCGGTCCC
TTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAGATTCC
CCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGGTGGCA
TCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCGGACGC
GGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAGGGTAT
GCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCAGCAGG
GTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTGCGCCC
GCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACTCTGGG
TGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCTCTACC
CCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTGGTATG
CTTCTGGAGATGGACAACACCGAGTTGCTCAGCCTGTGAGTTTTTTTCCC
TTCTGCTCCATTTGACTGTCAGTTCTTGTTGCTAATATATTATTGTAGGC
TTGAGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCGTT
TACGATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCCGC
TGAGGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAACA
AGGCGTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:857246..859603-

>ASPNIDRAFT_46760-T1 ID=ASPNIDRAFT_46760-T1|Name=ASPNIDRAFT_46760-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4590bp|location=Sequence derived from alignment at ACJE01000004.1:857246..859603- (Aspergillus niger ATCC 1015)
GCTTGAGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCG
TTTACGATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCC
GCTGAGGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAA
CAAGGCGTAAATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACG
TCAACGGCGCCGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGT
GCCACCACCCCCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGC
TGCCAACCAGCCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCT
CGGTGACCGAGGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTT
GCCTCCATCCGTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATA
CGCCTACGTTAACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAG
ACCTCAACTACACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCC
CAGCGTGACCCCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAA
GAACCTGGACAGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTG
CCTTCGGCAACATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAAC
TCCAAGGGATACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAA
CGCCATCAAGCACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCG
TCGGCCACCACATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATG
AAGGCCAACTTCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGA
TGACGATGAGTTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCG
CCACCCTCAGCCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTC
AACTTCTCTACCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGA
CAAGGAGATCCGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGC
ACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAG
AAGGCTTCCAAGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGA
TGACATTGATGATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCA
TCACCTCTGCCAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCT
CCCGACTCTGCTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGA
GGCCACCCCTGAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCG
AGTCCTCCGAGGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCC
TTCGGTAAGAGCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGA
GGCTTCCAAGGCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGC
CCCTCTACGTTGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTC
GAGGCTAGCATCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGC
TGCCGCTGGTATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCC
CCGGCCAGCAGGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCC
CCTCAGCCCGGTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTA
CCCCGGTCCCTTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACC
AGCAGATTCCCCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGC
CCTGGTGGCATCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCA
GTTCGGACGCGGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGG
GTCAGGGTATGCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCT
GTTCAGCAGGGTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGC
TGCTGCGCCCGCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTC
AGACTCTGGGTGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAG
GCTCTCTACCCCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGAT
CACTGGTATGCTTCTGGAGATGGACAACACCGAGTTGCTCAGCCTGCTTG
AGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCGTTTAC
GATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCCGCTGA
GGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAACAAGG
CGTAAATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAAC
GGCGCCGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCAC
CACCCCCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCA
ACCAGCCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTG
ACCGAGGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTC
CATCCGTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCT
ACGTTAACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTC
AACTACACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCG
TGACCCCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACC
TGGACAGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTC
GGCAACATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAA
GGGATACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCA
TCAAGCACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGC
CACCACATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGC
CAACTTCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACG
ATGAGTTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACC
CTCAGCCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTT
CTCTACCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGG
AGATCCGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAG
CGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGC
TTCCAAGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACA
TTGATGATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACC
TCTGCCAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGA
CTCTGCTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCA
CCCCTGAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCC
TCCGAGGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGG
TAAGAGCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTT
CCAAGGCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTC
TACGTTGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGC
TAGCATCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCG
CTGGTATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGC
CAGCAGGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCA
GCCCGGTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCG
GTCCCTTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAG
ATTCCCCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGG
TGGCATCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCG
GACGCGGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAG
GGTATGCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCA
GCAGGGTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTG
CGCCCGCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACT
CTGGGTGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCT
CTACCCCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTG
GTATGCTTCTGGAGATGGACAACACCGAGTTGCTCAGCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PAB1_1ASPNIDRAFT_46760Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46760-T1ASPNIDRAFT_46760-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46760-T1.cdsASPNIDRAFT_46760-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46760-T1.exon2ASPNIDRAFT_46760-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46760-T1.exon1ASPNIDRAFT_46760-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036053
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR006515
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR002004
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
DBxrefPFAM:PF00658
ProductProtein phosphatase PP2A regulatory subunit B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:857246..859603 -
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