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ASPNIDRAFT_170141-T1, ASPNIDRAFT_170141-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_170141-T1
Unique NameASPNIDRAFT_170141-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1416798..1417418-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_170141-T1 ID=ASPNIDRAFT_170141-T1|Name=ASPNIDRAFT_170141-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=621bp|location=Sequence derived from alignment at ACJE01000004.1:1416798..1417418- (Aspergillus niger ATCC 1015)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAGAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1416798..1417418-

>ASPNIDRAFT_170141-T1 ID=ASPNIDRAFT_170141-T1|Name=ASPNIDRAFT_170141-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=618bp|location=Sequence derived from alignment at ACJE01000004.1:1416798..1417418- (Aspergillus niger ATCC 1015)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAGAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YTH1ASPNIDRAFT_170141Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170141-T1.cdsASPNIDRAFT_170141-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170141-T1.utr3p1ASPNIDRAFT_170141-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170141-T1.exon1ASPNIDRAFT_170141-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170141-T1ASPNIDRAFT_170141-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092654KW
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR000571
DBxrefPFAM:PF00642
ProductRNA-binding component of cleavage and polyadenylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1416798..1417418 -
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