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ASPNIDRAFT_170148-T1, ASPNIDRAFT_170148-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_170148-T1
Unique NameASPNIDRAFT_170148-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1420396..1421388+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_170148-T1 ID=ASPNIDRAFT_170148-T1|Name=ASPNIDRAFT_170148-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=993bp|location=Sequence derived from alignment at ACJE01000004.1:1420396..1421388+ (Aspergillus niger ATCC 1015)
ATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAA
GCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCA
AGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAG
ACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGG
CATCGACGGTACGTGTAATGGAGCCGAGCCCCTCTCCCCTTATCATCATG
GATGCGTCATGTCGGTATAGTGAACAGAAAATAAGGTAAAATTGTGTGCA
TGCCCTAAGGCTAACCAACCTTGTGCTGGCCCAACAGTGGATTGGGAATA
CCCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGAC
TGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCG
GCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTA
TCTTGACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGA
ACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATT
TCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAA
GAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCA
CTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTC
GACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAG
TCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATG
ACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAG
CTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCG
AAGTCTGATTGAAACAGGGTATAACACATTGCATGATATGTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:1420396..1421388+

>ASPNIDRAFT_170148-T1 ID=ASPNIDRAFT_170148-T1|Name=ASPNIDRAFT_170148-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1728bp|location=Sequence derived from alignment at ACJE01000004.1:1420396..1421388+ (Aspergillus niger ATCC 1015)
ATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAA
GCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCA
AGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAG
ACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGG
CATCGACGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACT
ATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTAT
GTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGA
TCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATG
ATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTC
AGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCT
CAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACG
GCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGT
GGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGC
CAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAG
ATGGCGGCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCG
AAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGG
AGGCGACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACAT
TGCATGATATGTAAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCC
TTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGT
CGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTC
AATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAA
TTTGGTCTGGACGGCATCGACGTGGATTGGGAATACCCCTCCGACCCACA
AGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGC
CGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCT
CTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAA
TATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATC
AGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCT
ATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGG
CATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGC
GGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTG
CCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATA
CTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACACCCCAGACAG
TGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTC
TACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTCTGATTGAAAC
AGGGTATAACACATTGCATGATATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170148ASPNIDRAFT_170148Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170148-T1.exon1ASPNIDRAFT_170148-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170148-T1.exon2ASPNIDRAFT_170148-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170148-T1.cdsASPNIDRAFT_170148-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170148-T1ASPNIDRAFT_170148-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1420396..1421388 +
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