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ASPNIDRAFT_170651-T1, ASPNIDRAFT_170651-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_170651-T1
Unique NameASPNIDRAFT_170651-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1989524..1990334+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_170651-T1 ID=ASPNIDRAFT_170651-T1|Name=ASPNIDRAFT_170651-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=811bp|location=Sequence derived from alignment at ACJE01000004.1:1989524..1990334+ (Aspergillus niger ATCC 1015)
ATGTACGGCGAACACGGAAACAAGCTCGTATGTGCTTTTCTAATGAGCCA
TGCTTTATGAATAACCCGTCCTGACGAAACCCACAAACAGGTTCAACATG
CCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTG
GTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACA
CCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCG
TTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGA
TGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATG
CTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAG
GGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGC
ACTGCGAGTGGGAACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTT
CCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATA
TTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTG
AGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGGGTATGTGAG
GCATTTTCTATATTTTCCCTCGCGCGTATTGTTGATCGGCAGGTTGGAAT
GCTGACATTGCATATAGGGTGATCAATTTGACGAAAAACAGTCAACTCTA
CGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCTAGAGC
GTCTGAGTTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:1989524..1990334+

>ASPNIDRAFT_170651-T1 ID=ASPNIDRAFT_170651-T1|Name=ASPNIDRAFT_170651-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2016bp|location=Sequence derived from alignment at ACJE01000004.1:1989524..1990334+ (Aspergillus niger ATCC 1015)
ATGTACGGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCA
AGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAG
CCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCA
TTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCT
CTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCT
ACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTT
GATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGC
ATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGA
ACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGC
GATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGG
AAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGG
ATGCGGGGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAAC
AGTCAACTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGG
GTTTCTAGAGCGTCTGAGTTGAATGTACGGCGAACACGGAAACAAGCTCG
TTCAACATGCCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAA
ACCGAATTGGTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGA
TGTCGCACACCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAG
AACCAGCCGTTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGC
AACAAACGATGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGA
GGAGCTATGCTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGG
CAGACGAAGGGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCA
GCGATGGGCACTGCGAGTGGGAACCACAGTTCGTTGAGTCCGGAAGAAGA
AGAATACTTCCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGT
GGACAGATATTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTC
ATAGACGTGAGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGG
GGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAGGGGATG
TGGAACGATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGAATGTAC
GGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCAAGCTCT
CACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAGCCCGCG
AAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCATTCGAA
GGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCTCTTAGT
GGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCTACCACC
GTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTTGATTTG
CTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGCATCAGG
CCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGAACCACA
GTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGCGATCTT
CTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGGAAGCCT
GGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGGATGCGG
GGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAACAGTCAA
CTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCT
AGAGCGTCTGAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000811GINS complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF1ASPNIDRAFT_170651Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170651-T1.exon1ASPNIDRAFT_170651-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170651-T1.exon2ASPNIDRAFT_170651-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170651-T1.exon3ASPNIDRAFT_170651-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170651-T1.cdsASPNIDRAFT_170651-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170651-T1ASPNIDRAFT_170651-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092648K5
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR005339
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
ProductDNA replication protein psf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1989524..1990334 +
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