You are here

Home

ASPNIDRAFT_172390-T1, ASPNIDRAFT_172390-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_172390-T1
Unique NameASPNIDRAFT_172390-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3121481..3122235+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_172390-T1 ID=ASPNIDRAFT_172390-T1|Name=ASPNIDRAFT_172390-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=755bp|location=Sequence derived from alignment at ACJE01000004.1:3121481..3122235+ (Aspergillus niger ATCC 1015)
ATGACTTCCAAATGCACCCTCCCAGATCTACCCTACGACTACGATGTAAG
TCACACCCCCTTCCTTCCCACCCCCCATTAACCCCCATCTCATCAATAAC
AGGCCCTCGAACCCATCATCTCCAAACAAATCATGGAACTCCACCACAAA
AAGCACCACCAGACCTATGTAAACAACCTAAACGCCGCCCTCGCTTCTCA
AGCCTCCGCTCTCGACAGCAACGACATCACCCAGCTCATCAGCATCCAGC
AGAAACTCAAGTTCAACGGCGGCGGCCACATCAACCATTCTCTGTTTTGG
AAGAACTTGGCTCGCTACGACTCCCCGGCCACTAACCTGGAGAGATCCGC
CCCGAGCCTCAAAGACGCCATCGAGAAGCAGTGGGGATCAGTCAAAAACT
TCACGGATGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGCAGCGGATGG
GGCTGGCTGGTGAGTTCGGGTAAGACGGGATTCCTTGAGATTGTCACCAC
GAAGGATCAGGATCCAGTGACGGGACCGATTCCGGTGTTCGGAGTGGATA
TGTGGGAACATGCTTATTATCTGCAGGTAAGTATCCCCTCCTTCCAGATT
GCTTTGGTTGAGTAATGCTAATGATGATGGTGGTGGTATAGTACTTGAAC
AACAAAGCCTCCTACGTGCAGAACATCTGGAAGGTGATTAACTGGGAAGA
AGCGGAGCATCGGTATCTGAATGGTACGGAGGAACTGGGTTCGTTGAAGT
TGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3121481..3122235+

>ASPNIDRAFT_172390-T1 ID=ASPNIDRAFT_172390-T1|Name=ASPNIDRAFT_172390-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1899bp|location=Sequence derived from alignment at ACJE01000004.1:3121481..3122235+ (Aspergillus niger ATCC 1015)
ATGACTTCCAAATGCACCCTCCCAGATCTACCCTACGACTACGATGCCCT
CGAACCCATCATCTCCAAACAAATCATGGAACTCCACCACAAAAAGCACC
ACCAGACCTATGTAAACAACCTAAACGCCGCCCTCGCTTCTCAAGCCTCC
GCTCTCGACAGCAACGACATCACCCAGCTCATCAGCATCCAGCAGAAACT
CAAGTTCAACGGCGGCGGCCACATCAACCATTCTCTGTTTTGGAAGAACT
TGGCTCGCTACGACTCCCCGGCCACTAACCTGGAGAGATCCGCCCCGAGC
CTCAAAGACGCCATCGAGAAGCAGTGGGGATCAGTCAAAAACTTCACGGA
TGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGCAGCGGATGGGGCTGGC
TGGTGAGTTCGGGTAAGACGGGATTCCTTGAGATTGTCACCACGAAGGAT
CAGGATCCAGTGACGGGACCGATTCCGGTGTTCGGAGTGGATATGTGGGA
ACATGCTTATTATCTGCAGTACTTGAACAACAAAGCCTCCTACGTGCAGA
ACATCTGGAAGGTGATTAACTGGGAAGAAGCGGAGCATCGGTATCTGAAT
GGTACGGAGGAACTGGGTTCGTTGAAGTTGTAGATGACTTCCAAATGCAC
CCTCCCAGATCTACCCTACGACTACGATGCCCTCGAACCCATCATCTCCA
AACAAATCATGGAACTCCACCACAAAAAGCACCACCAGACCTATGTAAAC
AACCTAAACGCCGCCCTCGCTTCTCAAGCCTCCGCTCTCGACAGCAACGA
CATCACCCAGCTCATCAGCATCCAGCAGAAACTCAAGTTCAACGGCGGCG
GCCACATCAACCATTCTCTGTTTTGGAAGAACTTGGCTCGCTACGACTCC
CCGGCCACTAACCTGGAGAGATCCGCCCCGAGCCTCAAAGACGCCATCGA
GAAGCAGTGGGGATCAGTCAAAAACTTCACGGATGCGTTTGAGGCGGTGC
TGCTGGGCATCCAAGGCAGCGGATGGGGCTGGCTGGTGAGTTCGGGTAAG
ACGGGATTCCTTGAGATTGTCACCACGAAGGATCAGGATCCAGTGACGGG
ACCGATTCCGGTGTTCGGAGTGGATATGTGGGAACATGCTTATTATCTGC
AGTACTTGAACAACAAAGCCTCCTACGTGCAGAACATCTGGAAGGTGATT
AACTGGGAAGAAGCGGAGCATCGGTATCTGAATGGTACGGAGGAACTGGG
TTCGTTGAAGTTGTAGATGACTTCCAAATGCACCCTCCCAGATCTACCCT
ACGACTACGATGCCCTCGAACCCATCATCTCCAAACAAATCATGGAACTC
CACCACAAAAAGCACCACCAGACCTATGTAAACAACCTAAACGCCGCCCT
CGCTTCTCAAGCCTCCGCTCTCGACAGCAACGACATCACCCAGCTCATCA
GCATCCAGCAGAAACTCAAGTTCAACGGCGGCGGCCACATCAACCATTCT
CTGTTTTGGAAGAACTTGGCTCGCTACGACTCCCCGGCCACTAACCTGGA
GAGATCCGCCCCGAGCCTCAAAGACGCCATCGAGAAGCAGTGGGGATCAG
TCAAAAACTTCACGGATGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGC
AGCGGATGGGGCTGGCTGGTGAGTTCGGGTAAGACGGGATTCCTTGAGAT
TGTCACCACGAAGGATCAGGATCCAGTGACGGGACCGATTCCGGTGTTCG
GAGTGGATATGTGGGAACATGCTTATTATCTGCAGTACTTGAACAACAAA
GCCTCCTACGTGCAGAACATCTGGAAGGTGATTAACTGGGAAGAAGCGGA
GCATCGGTATCTGAATGGTACGGAGGAACTGGGTTCGTTGAAGTTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006801superoxide metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0004784superoxide dismutase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172390ASPNIDRAFT_172390Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172390-T1.exon1ASPNIDRAFT_172390-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172390-T1.exon2ASPNIDRAFT_172390-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172390-T1.exon3ASPNIDRAFT_172390-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172390-T1.cdsASPNIDRAFT_172390-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172390-T1ASPNIDRAFT_172390-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019833
DBxrefInterPro:IPR019832
DBxrefInterPro:IPR036324
DBxrefInterPro:IPR036314
DBxrefInterPro:IPR019831
DBxrefInterPro:IPR001189
DBxrefPFAM:PF00081
DBxrefPFAM:PF02777
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3121481..3122235 +
Powered by Drupal