You are here

Home

ASPNIDRAFT_55264-T1, ASPNIDRAFT_55264-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55264-T1
Unique NameASPNIDRAFT_55264-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3179688..3181853-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55264-T1 ID=ASPNIDRAFT_55264-T1|Name=ASPNIDRAFT_55264-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2166bp|location=Sequence derived from alignment at ACJE01000004.1:3179688..3181853- (Aspergillus niger ATCC 1015)
ATGCTCGGGTCGTCAGAAGCGACGCATAGTCCTCCTCCTCCCTCTCTTCA
TTACTCTCCCTCTATCGGGGACCTCGATTGCGCCTCTACTAGGGACTCGA
CCCCCGTCACCACTCCCCTCGGGTTTGGCGTACCGTTGCGCAGACCGGAT
AGGGAAAAGCTCTCGGATTCCTCGTTCACTCGAAATTCACTCGACATCGG
CGGCGACACGTCCTCACCGTACTTTTACAGCCAGCAACTACACTCTCACT
CTGATTCAGATCTCGACTTCCCTCTCTTTCCTTCCTCCCCCATACAAACC
AACACCATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCGCCAGAG
TTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTGCTCTGC
AGAGAGCTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCAAATGGT
GTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGG
TGCAGCTACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAATGTCCG
GCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTT
GGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGA
GTGAGTGTCCTTTGTCCTTATGGGAATCATTTCGGTTTCCCCTGATCGCG
CAAGTGCTTTGGCCACTGGAAGCTGACGATGAATCATCTAGCATAATCAT
GACCGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCATCCT
CATATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGTTGT
GGGGTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGAAGC
TCACGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGACA
GTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTCAG
CAAAACAATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGACTT
GCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATATGG
ATACCATTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGATGCC
GCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGAGG
TTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGCTTC
CAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTTCT
GGGCGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAATAC
TCCTACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCACAC
CAGACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATGCTT
GGTGGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCAGTC
TCAGTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGTGTA
TCGACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAACACT
CCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGTGA
GATCGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGATA
CCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAGTC
ATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCACAA
AGCTGTAAGTCTTTCGAACCAAACCACTTAGCTTTTCTAACTGTTTCCTA
GCACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTT
CCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATG
GAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAA
CCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTG
ACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATG
CAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGA
AGAGGGTCTTTTATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3179688..3181853-

>ASPNIDRAFT_55264-T1 ID=ASPNIDRAFT_55264-T1|Name=ASPNIDRAFT_55264-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6084bp|location=Sequence derived from alignment at ACJE01000004.1:3179688..3181853- (Aspergillus niger ATCC 1015)
CACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTTC
CATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATGG
AGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAAC
CTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTGA
CTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATGC
AAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGAA
GAGGGTCTTTTATAACATAATCATGACCGGCACATCTCCGTTCACTTTCC
AGTCACCGTCATTTCATTCATCCTCATATTTACCCAAGCTGGAGGCAAAC
TTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTCCGACGCTTCACGA
TCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAGTCACCTCAGCAGG
GCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGCGGTGGCG
ATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATCAAGGCCGTGGATT
GCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTGAGTCAGGTCCCTC
ACACTCAGCAGCATTCGGATATGGATACCATTGATGACATGGAACTCGAT
GAGCCGATGGGTGACCACGATGCCGCCACTGCACAGCTGTTCGCGCCTCA
GTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAAAGGGTTC
CGCATCTGAATCTATCTATGCTTCCAGGACACCAAGGGTTCAAAGGCTCT
CAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGCAGAACAA
CCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATGGCGAACCCTCTAC
AGAACTCACAGTTCCGGACCACACCAGACTCGTCTGCACCTGGGACGCCG
GCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAGATCTGGCTATGCA
AAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCTGGGAACA
ACAACGATATGGTAGACTTGTGTATCGACGAACCAGCCAAACGGTTGTTT
AGCCCCACCGGCGGAATTAACACTCCCAACGCTCACTTCAAGCTAAGTGG
AGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGCATCCGAGAGCAAC
AGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCTTCCCAACGAGGAA
CCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGTATAAGAA
CCAGAATGGTCTGAAATACCACAAAGCTATGCTCGGGTCGTCAGAAGCGA
CGCATAGTCCTCCTCCTCCCTCTCTTCATTACTCTCCCTCTATCGGGGAC
CTCGATTGCGCCTCTACTAGGGACTCGACCCCCGTCACCACTCCCCTCGG
GTTTGGCGTACCGTTGCGCAGACCGGATAGGGAAAAGCTCTCGGATTCCT
CGTTCACTCGAAATTCACTCGACATCGGCGGCGACACGTCCTCACCGTAC
TTTTACAGCCAGCAACTACACTCTCACTCTGATTCAGATCTCGACTTCCC
TCTCTTTCCTTCCTCCCCCATACAAACCAACACCATGACCGGTGCAGCCG
CTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCCTCCCGGACAG
CAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTAATGGAGAACG
GACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGCGTCTTCAAGG
CCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGCACAATGGGGC
AACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCGATAAAGGCCG
CCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGCTGGGGTGGTG
TGTCTGTTGGCAGTTGGATTCGCGATGACACGGCCACAATAACCAGCAGC
TTCATGACAACGCAGACGGCACCTTTTCCATCGTCAATCCCGAGACCTCA
ACTCCATATCCTGGAACACTTGGTATGGAGAAGGAGAAGCCCTACCGCTG
CGAGGTCTGTGGCAAGCGTTATAAGAACCTGAATGGTCTTAAATATCACA
AGTCGCACTCGCCGCCATGCAATCCTGACTTCCAGCTTGCTGCAGGCAGG
AACTTGGCTTTTGGTGGAGGCGTCATGCAAGGGCAGAACATCAACGTTGC
TGGGGCTGGCCTACCTGGCATCGGTGAAGAGGGTCTTTTATAACATAATC
ATGACCGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCATC
CTCATATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGTT
GTGGGGTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGAA
GCTCACGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGA
CAGTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTC
AGCAAAACAATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGAC
TTGCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATAT
GGATACCATTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGATG
CCGCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGA
GGTTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGCT
TCCAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTT
CTGGGCGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAAT
ACTCCTACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCAC
ACCAGACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATGC
TTGGTGGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCAG
TCTCAGTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGTG
TATCGACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAACA
CTCCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGT
GAGATCGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGA
TACCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAG
TCATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCAC
AAAGCTATGCTCGGGTCGTCAGAAGCGACGCATAGTCCTCCTCCTCCCTC
TCTTCATTACTCTCCCTCTATCGGGGACCTCGATTGCGCCTCTACTAGGG
ACTCGACCCCCGTCACCACTCCCCTCGGGTTTGGCGTACCGTTGCGCAGA
CCGGATAGGGAAAAGCTCTCGGATTCCTCGTTCACTCGAAATTCACTCGA
CATCGGCGGCGACACGTCCTCACCGTACTTTTACAGCCAGCAACTACACT
CTCACTCTGATTCAGATCTCGACTTCCCTCTCTTTCCTTCCTCCCCCATA
CAAACCAACACCATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCG
CCAGAGTTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTG
CTCTGCAGAGAGCTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCA
AATGGTGTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTC
TATCGGTGCAGCTACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAA
TGTCCGGCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGT
TTAGTTGGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCG
CGATGACACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCAC
CTTTTCCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTG
GTATGGAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTAT
AAGAACCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAA
TCCTGACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCG
TCATGCAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATC
GGTGAAGAGGGTCTTTTATAACATAATCATGACCGGCACATCTCCGTTCA
CTTTCCAGTCACCGTCATTTCATTCATCCTCATATTTACCCAAGCTGGAG
GCAAACTTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTCCGACGCT
TCACGATCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAGTCACCTC
AGCAGGGCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGCG
GTGGCGATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATCAAGGCCG
TGGATTGCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTGAGTCAGG
TCCCTCACACTCAGCAGCATTCGGATATGGATACCATTGATGACATGGAA
CTCGATGAGCCGATGGGTGACCACGATGCCGCCACTGCACAGCTGTTCGC
GCCTCAGTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAAA
GGGTTCCGCATCTGAATCTATCTATGCTTCCAGGACACCAAGGGTTCAAA
GGCTCTCAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGCA
GAACAACCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATGGCGAACC
CTCTACAGAACTCACAGTTCCGGACCACACCAGACTCGTCTGCACCTGGG
ACGCCGGCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAGATCTGGC
TATGCAAAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCTG
GGAACAACAACGATATGGTAGACTTGTGTATCGACGAACCAGCCAAACGG
TTGTTTAGCCCCACCGGCGGAATTAACACTCCCAACGCTCACTTCAAGCT
AAGTGGAGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGCATCCGAG
AGCAACAGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCTTCCCAAC
GAGGAACCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGTA
TAAGAACCAGAATGGTCTGAAATACCACAAAGCTATGCTCGGGTCGTCAG
AAGCGACGCATAGTCCTCCTCCTCCCTCTCTTCATTACTCTCCCTCTATC
GGGGACCTCGATTGCGCCTCTACTAGGGACTCGACCCCCGTCACCACTCC
CCTCGGGTTTGGCGTACCGTTGCGCAGACCGGATAGGGAAAAGCTCTCGG
ATTCCTCGTTCACTCGAAATTCACTCGACATCGGCGGCGACACGTCCTCA
CCGTACTTTTACAGCCAGCAACTACACTCTCACTCTGATTCAGATCTCGA
CTTCCCTCTCTTTCCTTCCTCCCCCATACAAACCAACACCATGACCGGTG
CAGCCGCTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCCTCCC
GGACAGCAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTAATGG
AGAACGGACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGCGTCT
TCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGCACAA
TGGGGCAACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCGATAA
AGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGCTGGG
GTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55264ASPNIDRAFT_55264Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55264-T1ASPNIDRAFT_55264-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55264-T1.cdsASPNIDRAFT_55264-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55264-T1.exon3ASPNIDRAFT_55264-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55264-T1.exon2ASPNIDRAFT_55264-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55264-T1.exon1ASPNIDRAFT_55264-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3179688..3181853 -
Powered by Drupal