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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:3272135..3274679+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_130294-T1 ID=ASPNIDRAFT_130294-T1|Name=ASPNIDRAFT_130294-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2545bp|location=Sequence derived from alignment at ACJE01000004.1:3272135..3274679+ (Aspergillus niger ATCC 1015)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCG
AGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAG
AGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGT
GAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGG
GAAAGAATGCCCCTGTTCAGGAGGAAGAGGATGAGGATGAAGAGGAGGAA
GAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGA
TGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTA
ATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGAT
GATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAA
GCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATG
ATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTG
CTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGA
GAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGG
CTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCT
GCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATAT
TGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAG
AGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAG
TCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCG
TCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCA
TTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGT
AGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCT
CGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCA
TTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACA
AAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTT
CAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATCA
TCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTC
ACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGATCGCATGCT
CGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCA
AGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGAC
AAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGC
CAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCC
CCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAG
ATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCA
CCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCC
ACGGTAGCATGAGCCAAGAACAGGTATGTTATTTTACATCGACTTTCATT
TTCTTCAATACGATCGATGATACTAATCGTGGGGTTTTCCAAACTACAGC
GTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTG
GCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGGT
CATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTTG
GTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGCC
GAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCA
AGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCCT
GGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTCG
GAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCAA
GGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAGC
GTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGGC
GCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGCA
GAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGCC
AGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCATG
AAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAG back to topCoding sequence (CDS) from alignment at ACJE01000004.1:3272135..3274679+ >ASPNIDRAFT_130294-T1 ID=ASPNIDRAFT_130294-T1|Name=ASPNIDRAFT_130294-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7137bp|location=Sequence derived from alignment at ACJE01000004.1:3272135..3274679+ (Aspergillus niger ATCC 1015)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACAGATGATGCTGCGGCGGCGCAGCAGG
AGAAGGGGAAGAACAAGAAGGTGAAGAAGCAGGAACAACAGCAACAACAA
GCACAACAGAAGAAAAAGAAGGGAAAGAATGCCCCTGTTCAGGAGGAAGA
GGATGAGGATGAAGAGGAGGAAGAGGATCAGGGTGAAGATGATGGCGCGC
TTAATTCGGATTTCGAGTTCGATGTCGGCGGTGCTGCGAATGAGGTTAGG
GATTTCGATGGGTGGGAGGTTAATGGTAATGAGGAGGGTAAGGGTGGGGA
TAAGAAGGCTGTGGATATCGATGATATTATTTCGAGGAGGCAGGCGAAGA
AGGAGGCTGAGTTGATTCGCAAGCAGAAGAAGAAGCAGAAGCAAGAGGAG
GAGTTTAGTGAATTGGAGGATGATGATGAGGAGGATGGTGGTATGGAGGT
CGACTTTGGGGATGATGAGCTGCTTGCGGAGGATGGGTTCGGTATGGGTG
TCGATGGGGAGGAGGAGAGCGAGAAGTCCGATGCGGAGGATGAGGAGAAG
GAAGAAGGGTCTGATGAGGAGGCTGAGGGCAGTGATGAAGACGAGCAGAT
GGATGAGGATGATGACGATGCTGCTTCGGATGACGACTCGGTTGCTACTC
CTGTCATGCACCCGGATGATATTGCCTCTGATCGGGACTCGGACGAGGAG
AGTCAGGTCGACGCCGAGGAAGAGGAGAAGCGCAAGGCTTTCTTCGCGCC
CGAGGAGGAAAAGACTTCCGAGTCTGCTATGGCAGATGCGAAGCGGTCGT
TCCAGGAATTCAACCTCTCTCGTCCCATCCTTCGTGGTCTCGCCGGAGTC
AACTTCTCGAACCCTACACCCATTCAGCGCAAGACGATCCCCGTGGCTCT
CCTGGGCAAGGATATTGTCGGTAGTGCCGTTACTGGTTCCGGAAAGACTG
CCGCCTTCGTTGTCCCGATTCTCGAACGTCTGCTGTTCCGGCCGCGCAAG
GTCCCGACGAGTCGTGTTGCCATTCTCATGCCCACCCGTGAATTGGCGGT
GCAGTGCTACAATGTCGCTACAAAGCTGGCCACATACACGGACATCACCT
TCTGTCAGCTGGTCGGTGGTTTCAGTCTTCGCGAGCAGGAGAACATCTTG
AAGAAGCGTCCCGATGTGATCATCGCCACCCCCGGTCGTTTCATTGATCA
CATGCGCAACTCGGCCAGCTTCACCGTTGATACTCTGGAAATCCTGGTTC
TGGATGAAGCCGATCGCATGCTCGAGGACGGTTTCGCCGACGAGTTGAAC
GAGATTCTCACTACGATCCCCAAGTCGCGCCAGACCATGCTTTTCTCGGC
TACGATGACGGACACTGTCGACAAGCTCATTCGCGTCGGTCTCAACCGCC
CCGTGCGCTTGATGGTCGACGCCAAGAAGAACACGGCCGTGACACTGGTG
CAGGAATTCGTGCGTCTGCGCCCCGGACGTGAGGACAAGCGACTAGGCTA
CCTTCTCTACCTCTGCAAAGAGATCTACACCGGTCGGGTGATTGTCTTCT
TCCGACAGAAGAAGGAGGCGCACCGGGTGCGTATCATCTTCGGACTGCTG
GGCTTGAAGGCTGCCGAGCTCCACGGTAGCATGAGCCAAGAACAGCGTAT
CAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTGGCTA
CGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGGTCATC
AACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTTGGTCG
TACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGCCGAGC
CTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCAAGGA
GCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCCTGGGC
GGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTCGGAGG
AGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCAAGGGA
GAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAGCGTAC
TTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGGCGCGG
CGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGCAGAAG
CTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGCCAGGA
AGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCATGAAGA
ATGGGCAATTGCCCAAAGCTAAGAAGGACATGGCCGGAACGAAAAAGCGC
GCGAACGCCGACGACGACTTCGTGCTCACATTGTCGGACGATGAGAATGA
CACAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGG
TGAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAG
GGAAAGAATGCCCCTGTTCAGGAGGAAGAGGATGAGGATGAAGAGGAGGA
AGAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCG
ATGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTT
AATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGA
TGATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCA
AGCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGAT
GATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCT
GCTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCG
AGAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAG
GCTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGC
TGCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATA
TTGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAA
GAGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGA
GTCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTC
GTCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCC
ATTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGG
TAGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTC
TCGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCC
ATTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTAC
AAAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTT
TCAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATC
ATCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTT
CACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGATCGCATGC
TCGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCC
AAGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGA
CAAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACG
CCAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGC
CCCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGA
GATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGC
ACCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTC
CACGGTAGCATGAGCCAAGAACAGCGTATCAAGAGTGTCGAGAATTTCCG
TGAGGGCAAGGCGGCGTTCCTGCTGGCTACGGATCTGGCGTCGCGTGGTC
TGGATATCAAGGGCGTTGAGACGGTCATCAACTACGAAGCGCCGCAGAGC
CATGAGATCTACCTGCATCGTGTTGGTCGTACTGCGCGTGCGGGCCGCTC
CGGTCGGGCCTGCACCATTGCCGCCGAGCCTGACCGCAAGGTGGTCAAGG
CGGCGGTGAAGGCGGGCAAGTCGCAAGGAGCCAAGATTGCCAGCCGTGTG
ATTGAACCGGCGGTGGCGGATTCCTGGGCGGCCAAGGCGGAGGAGTTGGC
GGACGAGGTGGAAGAGGTGTTGTCGGAGGAGAAGCTCGAGAAGCAGCTGG
CACAGGCGGAGATGCAAGTGACCAAGGGAGAGAACCTGATCAAGCACGAG
GCGGAGATCAAGTCGCGGCCGAAGCGTACTTGGTTCGAGACGGAGCGCGA
CAAGAAGGCGGCGCGGAAGCTGGGCGCGGCGGAGCTCAACGGGCCCGATG
CCGGCATGTCCAAGAAGGAGAAGCAGAAGCTCAGCAACAAGGACAAGAAG
CGTCTGGATGATTCCCGTCAGCGCCAGGAAGCGGGTGCTGGTTGGAAGAA
GGGCCGGGCAACACGGGAGAGCATGAAGAATGGGCAATTGCCCAAAGCTA
AGAAGGACATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTC
GTGCTCACATTGTCGGACGATGAGAATGACACAGATGATGCTGCGGCGGC
GCAGCAGGAGAAGGGGAAGAACAAGAAGGTGAAGAAGCAGGAACAACAGC
AACAACAAGCACAACAGAAGAAAAAGAAGGGAAAGAATGCCCCTGTTCAG
GAGGAAGAGGATGAGGATGAAGAGGAGGAAGAGGATCAGGGTGAAGATGA
TGGCGCGCTTAATTCGGATTTCGAGTTCGATGTCGGCGGTGCTGCGAATG
AGGTTAGGGATTTCGATGGGTGGGAGGTTAATGGTAATGAGGAGGGTAAG
GGTGGGGATAAGAAGGCTGTGGATATCGATGATATTATTTCGAGGAGGCA
GGCGAAGAAGGAGGCTGAGTTGATTCGCAAGCAGAAGAAGAAGCAGAAGC
AAGAGGAGGAGTTTAGTGAATTGGAGGATGATGATGAGGAGGATGGTGGT
ATGGAGGTCGACTTTGGGGATGATGAGCTGCTTGCGGAGGATGGGTTCGG
TATGGGTGTCGATGGGGAGGAGGAGAGCGAGAAGTCCGATGCGGAGGATG
AGGAGAAGGAAGAAGGGTCTGATGAGGAGGCTGAGGGCAGTGATGAAGAC
GAGCAGATGGATGAGGATGATGACGATGCTGCTTCGGATGACGACTCGGT
TGCTACTCCTGTCATGCACCCGGATGATATTGCCTCTGATCGGGACTCGG
ACGAGGAGAGTCAGGTCGACGCCGAGGAAGAGGAGAAGCGCAAGGCTTTC
TTCGCGCCCGAGGAGGAAAAGACTTCCGAGTCTGCTATGGCAGATGCGAA
GCGGTCGTTCCAGGAATTCAACCTCTCTCGTCCCATCCTTCGTGGTCTCG
CCGGAGTCAACTTCTCGAACCCTACACCCATTCAGCGCAAGACGATCCCC
GTGGCTCTCCTGGGCAAGGATATTGTCGGTAGTGCCGTTACTGGTTCCGG
AAAGACTGCCGCCTTCGTTGTCCCGATTCTCGAACGTCTGCTGTTCCGGC
CGCGCAAGGTCCCGACGAGTCGTGTTGCCATTCTCATGCCCACCCGTGAA
TTGGCGGTGCAGTGCTACAATGTCGCTACAAAGCTGGCCACATACACGGA
CATCACCTTCTGTCAGCTGGTCGGTGGTTTCAGTCTTCGCGAGCAGGAGA
ACATCTTGAAGAAGCGTCCCGATGTGATCATCGCCACCCCCGGTCGTTTC
ATTGATCACATGCGCAACTCGGCCAGCTTCACCGTTGATACTCTGGAAAT
CCTGGTTCTGGATGAAGCCGATCGCATGCTCGAGGACGGTTTCGCCGACG
AGTTGAACGAGATTCTCACTACGATCCCCAAGTCGCGCCAGACCATGCTT
TTCTCGGCTACGATGACGGACACTGTCGACAAGCTCATTCGCGTCGGTCT
CAACCGCCCCGTGCGCTTGATGGTCGACGCCAAGAAGAACACGGCCGTGA
CACTGGTGCAGGAATTCGTGCGTCTGCGCCCCGGACGTGAGGACAAGCGA
CTAGGCTACCTTCTCTACCTCTGCAAAGAGATCTACACCGGTCGGGTGAT
TGTCTTCTTCCGACAGAAGAAGGAGGCGCACCGGGTGCGTATCATCTTCG
GACTGCTGGGCTTGAAGGCTGCCGAGCTCCACGGTAGCATGAGCCAAGAA
CAGCGTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCT
GCTGGCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGA
CGGTCATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGT
GTTGGTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGC
CGCCGAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGT
CGCAAGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGAT
TCCTGGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTT
GTCGGAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGA
CCAAGGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCG
AAGCGTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCT
GGGCGCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGA
AGCAGAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAG
CGCCAGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAG
CATGAAGAATGGGCAATTGCCCAAAGCTAAGAAGGAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000041.7 |
| Note | SMCOG1122:ATP-dependent RNA helicase |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | nucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:3272135..3274679 + |
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