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ASPNIDRAFT_172534-T1, ASPNIDRAFT_172534-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_172534-T1
Unique NameASPNIDRAFT_172534-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3305338..3306312+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_172534-T1 ID=ASPNIDRAFT_172534-T1|Name=ASPNIDRAFT_172534-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=975bp|location=Sequence derived from alignment at ACJE01000004.1:3305338..3306312+ (Aspergillus niger ATCC 1015)
ATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAAT
CTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTG
CTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGT
AGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTT
TGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTATTGCGACAGCGAGA
CAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGGGTACGATTC
ACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCT
GCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCTGTCGGATTC
GCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGACTATCACGG
TCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGTCTTCCTTAG
CTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTCTTTGGGGCC
CGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGC
CATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCT
TTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACT
GCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTC
ATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCCCTTGCTTGA
TTTCCACTCGTCTTGGGCTAATGATGGACATAGACTATCTTTACCAGAGT
ATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCTTCCAGACA
GCGCAAGGACCGATAAGAGAGATGTACAGTGAGAATGATGTCACTCCTGT
TATAAACGGAACAGCATCTAGATGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:3305338..3306312+

>ASPNIDRAFT_172534-T1 ID=ASPNIDRAFT_172534-T1|Name=ASPNIDRAFT_172534-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2430bp|location=Sequence derived from alignment at ACJE01000004.1:3305338..3306312+ (Aspergillus niger ATCC 1015)
ATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAAT
CTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTG
CTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGT
AGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTT
TGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCA
ACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAG
GAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTT
GTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGTTTTCTGG
TTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCTGCAGATC
ATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGACCAG
CTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGGAGCCTT
ACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATTGTGGTT
CCGTTCTGTACGTTCCCCACGGATCCCTTGCTTGATTTCCACTCGTCTTG
GGCTAATGATGGACATAGACTATCTTTACCAGAGTATCCGGACAACAACG
GAGGCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATA
AGAGAGATGTACAGTGAGAATGATGTCACTCCTGTTATAAACGGAACAGC
ATCTAGATGAATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCA
ATGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATC
CTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCAC
CCTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTA
TTCTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTAT
TTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCA
ACTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATA
CCCTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTC
TGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCC
GCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACT
ATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGC
CCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTG
GATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCCCTTGCTTGATTTCC
ACTCGTCTTGGGCTAATGATGGACATAGACTATCTTTACCAGAGTATCCG
GACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCA
AGGACCGATAAGAGAGATGTACAGTGAGAATGATGTCACTCCTGTTATAA
ACGGAACAGCATCTAGATGAATGGACTCCAAAGCTCCACTCCATCCCTAC
TACCCCCTCAATGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTT
GTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAA
TCATTTTCACCCTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGAC
CGTCTTGCTATTCTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTT
CGAGGGTTATTTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACT
TCTTCGGTCAACTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATG
ACCTCAGATACCCTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTG
GGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTC
TGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGAT
GCTCTTTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACC
GTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGA
ATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCCCTTG
CTTGATTTCCACTCGTCTTGGGCTAATGATGGACATAGACTATCTTTACC
AGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCCTTCC
AGACAGCGCAAGGACCGATAAGAGAGATGTACAGTGAGAATGATGTCACT
CCTGTTATAAACGGAACAGCATCTAGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016125sterol metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0047750cholestenol delta-isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172534ASPNIDRAFT_172534Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172534-T1.exon1ASPNIDRAFT_172534-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172534-T1.exon2ASPNIDRAFT_172534-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172534-T1.exon3ASPNIDRAFT_172534-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172534-T1.cdsASPNIDRAFT_172534-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172534-T1ASPNIDRAFT_172534-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033118
DBxrefInterPro:IPR007905
DBxrefPFAM:PF05241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3305338..3306312 +
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