You are here

Home

ASPNIDRAFT_172477-T1, ASPNIDRAFT_172477-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_172477-T1
Unique NameASPNIDRAFT_172477-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3502207..3503128+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_172477-T1 ID=ASPNIDRAFT_172477-T1|Name=ASPNIDRAFT_172477-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=922bp|location=Sequence derived from alignment at ACJE01000004.1:3502207..3503128+ (Aspergillus niger ATCC 1015)
ATGCTCCAGGGAGTCGCCTTCATCACCGGTGCCGCATCAGGTCTGTAGCA
CCTATCCCACTTTACCCCTCAAGCAAACTGACTGATATTCTACACAGGCA
TCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAACTC
GCTATCGCTGATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGATAT
TGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACGTGA
CCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAATTC
GAGAGGATTGATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAATGGC
GTATTCGGGGGACCATGAGATTGCGGATTGGGAGAAGACGTTAGGGGTAA
ATTTGCATGGGGTGTGGATGTCGAGTCGGGAGGAGATTAAGGTTATGATG
GGACAGGAGAAGAGGGATGATAGGTGAGGCTTTTTTCTATTTAGTATTCT
GAGATGGAGATGGAGATGGGGTTCGGTCTGTGCTAATGTGTGATGTGTGC
ACTTGCTTGTTCTACAGTCCTCGCTCATCACGAGGTGTCATTGTCAACGT
GGCATCTGCTTATGGTCTTGTTGCGACCCCTGCCAATATACCCCTCGTTT
CTTATACGGCTGCGAAACATGGTGTGGTTGGGATGAGCAAGGCTGATGCG
ATTGTCTACGCGCCTTTAGGGATTCGGATCAATGCTATCTGTCCTGGTTA
TGTTCAGACACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAAAG
AAGTGTTGAGAGTCCCAGTGGGAAGATTGGCGGATGTAGAGGAAATTGCG
GATACGATTACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGGTC
TGCGTTGGTGGTGGATGGGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3502207..3503128+

>ASPNIDRAFT_172477-T1 ID=ASPNIDRAFT_172477-T1|Name=ASPNIDRAFT_172477-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2313bp|location=Sequence derived from alignment at ACJE01000004.1:3502207..3503128+ (Aspergillus niger ATCC 1015)
ATGCTCCAGGGAGTCGCCTTCATCACCGGTGCCGCATCAGGCATCGGAAA
AGCCACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAACTCGCTATCG
CTGATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGATATTGAGGCC
CGCTTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACGTGACCGATCC
GGTCTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAATTCGAGAGGA
TTGATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAATGGCGTATTCG
GGGGACCATGAGATTGCGGATTGGGAGAAGACGTTAGGGGTAAATTTGCA
TGGGGTGTGGATGTCGAGTCGGGAGGAGATTAAGGTTATGATGGGACAGG
AGAAGAGGGATGATAGTCCTCGCTCATCACGAGGTGTCATTGTCAACGTG
GCATCTGCTTATGGTCTTGTTGCGACCCCTGCCAATATACCCCTCGTTTC
TTATACGGCTGCGAAACATGGTGTGGTTGGGATGAGCAAGGCTGATGCGA
TTGTCTACGCGCCTTTAGGGATTCGGATCAATGCTATCTGTCCTGGTTAT
GTTCAGACACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAAAGA
AGTGTTGAGAGTCCCAGTGGGAAGATTGGCGGATGTAGAGGAAATTGCGG
ATACGATTACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGGTCT
GCGTTGGTGGTGGATGGGTAGATGCTCCAGGGAGTCGCCTTCATCACCGG
TGCCGCATCAGGCATCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACG
GTGTCAGCCAACTCGCTATCGCTGATATCAACTTCGCCGCGGCACAGGAT
ACCGCCCAGGATATTGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCT
GAACATTGACGTGACCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGA
CGGTTCAGCAATTCGAGAGGATTGATTATGCGGTCAATAGTGCTGGGATT
GCTGGGTCAATGGCGTATTCGGGGGACCATGAGATTGCGGATTGGGAGAA
GACGTTAGGGGTAAATTTGCATGGGGTGTGGATGTCGAGTCGGGAGGAGA
TTAAGGTTATGATGGGACAGGAGAAGAGGGATGATAGTCCTCGCTCATCA
CGAGGTGTCATTGTCAACGTGGCATCTGCTTATGGTCTTGTTGCGACCCC
TGCCAATATACCCCTCGTTTCTTATACGGCTGCGAAACATGGTGTGGTTG
GGATGAGCAAGGCTGATGCGATTGTCTACGCGCCTTTAGGGATTCGGATC
AATGCTATCTGTCCTGGTTATGTTCAGACACCGATGATCGATCAGATGGC
TGATGAGGTGATGCGGAAAGAAGTGTTGAGAGTCCCAGTGGGAAGATTGG
CGGATGTAGAGGAAATTGCGGATACGATTACGTTCATGCTGTCGCCGATG
AGTAGCTATATGTATGGGTCTGCGTTGGTGGTGGATGGGTAGATGCTCCA
GGGAGTCGCCTTCATCACCGGTGCCGCATCAGGCATCGGAAAAGCCACAG
CCTATGCCCTCGCCCGACACGGTGTCAGCCAACTCGCTATCGCTGATATC
AACTTCGCCGCGGCACAGGATACCGCCCAGGATATTGAGGCCCGCTTCAG
TGGAGTGAGAGTGCTGCCGCTGAACATTGACGTGACCGATCCGGTCTCTA
TCCACAAGGCTGTGTCAGAGACGGTTCAGCAATTCGAGAGGATTGATTAT
GCGGTCAATAGTGCTGGGATTGCTGGGTCAATGGCGTATTCGGGGGACCA
TGAGATTGCGGATTGGGAGAAGACGTTAGGGGTAAATTTGCATGGGGTGT
GGATGTCGAGTCGGGAGGAGATTAAGGTTATGATGGGACAGGAGAAGAGG
GATGATAGTCCTCGCTCATCACGAGGTGTCATTGTCAACGTGGCATCTGC
TTATGGTCTTGTTGCGACCCCTGCCAATATACCCCTCGTTTCTTATACGG
CTGCGAAACATGGTGTGGTTGGGATGAGCAAGGCTGATGCGATTGTCTAC
GCGCCTTTAGGGATTCGGATCAATGCTATCTGTCCTGGTTATGTTCAGAC
ACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAAAGAAGTGTTGA
GAGTCCCAGTGGGAAGATTGGCGGATGTAGAGGAAATTGCGGATACGATT
ACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGGTCTGCGTTGGT
GGTGGATGGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172477ASPNIDRAFT_172477Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172477-T1.exon1ASPNIDRAFT_172477-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172477-T1.exon2ASPNIDRAFT_172477-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172477-T1.exon3ASPNIDRAFT_172477-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172477-T1.cdsASPNIDRAFT_172477-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172477-T1ASPNIDRAFT_172477-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3502207..3503128 +
Powered by Drupal