You are here

Home

ASPNIDRAFT_54488-T1, ASPNIDRAFT_54488-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54488-T1
Unique NameASPNIDRAFT_54488-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:659940..661221-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54488-T1 ID=ASPNIDRAFT_54488-T1|Name=ASPNIDRAFT_54488-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1282bp|location=Sequence derived from alignment at ACJE01000005.1:659940..661221- (Aspergillus niger ATCC 1015)
ATGGCAGCGCAAGAGTACTTCGGTGGCAGCAGTGCCACCCCCGCCAACCC
TGATCGCCGTCAGCAGAACCCCTCTCCTTGGTCATCCCCAGCTGTCGACA
CTCCCAGCTCCACCGGGTACGGCTCGTATCCTCCATCCGTCGAGAACGGC
CAGGACCGATACGGCTCCTCTTCTCCTTACCCCCCTCAGGGCGCTGGTGG
CTACAACCGACCCTACAGCCCGTACCAGCCACACTCGCCTCAACCCGGCT
ACCAGAACCCCGAATACTCATCCTACGGTGGACGCCCACCCTACCCACAG
CACGAGCAGCCTTCGCCATACGGCCAGCCACCCTCTGAGTCCAGACCTTA
CCCGCCTTACCCTCAGCATGAAGGGTACCCTTCCCACCAGCAGCCCCCTC
CCTACTCTCCCGAGTCGTCCACCGACCCCGCCGCAGCCGGTGAAGGCGAT
AAGGGTATCATGGGCGCCCTCGCTGGCGGTGCAGCTGGTGGCTTCGCAGG
ACACAAAGTCAACCACGGCTTCCTCGGCACCATCGGCGGAGCCATGATGG
GCTCGGTAGCCGAAGACGCAGTGAAGAAACACAAGGAGAAGAAAGAGCAC
GAGGAAGAAGAACGTCGTCGCATGGAAGAGCGTCGCAGAATGGAGGAGCA
CTACAGAATGGAAGAACAGCGTCGCAGGGAGGAACAGCAGAGGATGTCTC
AGCAGCATCACCACCGACCTCCTCCGCATCACGGCGCGCCTCTGCGCGGA
AACTTCTCTGCTTCATCCCGGGATATCCGCCTTGAGAGCCACCACGATCT
AGTGGCAGCCTGTGGACGGGTCTCGGGAGAGTTGCAGCTCTCGGTACTTC
CTTTGAATAGTGTGTTGGCTAACCACTGGGGAAAGTTCGCGTGGGAGCGG
AATGGAAACTTTGCTGCGTCGGCTAGGAATGTTCGCTTGGTTGATGGGGG
ACGTGTGCTGGAGGCGGAGTTGGCGGATGGGAACGATGGCTGGAATCGGA
CCTGGATTCGTCTGGATGAGAGGATTACGAACCAGAACGGCCAGCTGATG
TTCCTGGATTAGATGTGATATTGTGGTTTGCTTTGAGCGTTGCTTTACCC
GAGATAAAGAGTTTATTTATACCCACGCTCAACTTGACGTGGTGATTTGC
GCTGACTGGACTGGTTTCCATACTTACAGTTGTCTACTCCATTGCTCTTA
GCGCAGTATGAAGTCGCGTCGTTATTCACAATGGATTTAATACTTTGCTT
TTTCATTACTCCTCTTTCTTATATTATCGATC
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:659940..661221-

>ASPNIDRAFT_54488-T1 ID=ASPNIDRAFT_54488-T1|Name=ASPNIDRAFT_54488-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1062bp|location=Sequence derived from alignment at ACJE01000005.1:659940..661221- (Aspergillus niger ATCC 1015)
ATGGCAGCGCAAGAGTACTTCGGTGGCAGCAGTGCCACCCCCGCCAACCC
TGATCGCCGTCAGCAGAACCCCTCTCCTTGGTCATCCCCAGCTGTCGACA
CTCCCAGCTCCACCGGGTACGGCTCGTATCCTCCATCCGTCGAGAACGGC
CAGGACCGATACGGCTCCTCTTCTCCTTACCCCCCTCAGGGCGCTGGTGG
CTACAACCGACCCTACAGCCCGTACCAGCCACACTCGCCTCAACCCGGCT
ACCAGAACCCCGAATACTCATCCTACGGTGGACGCCCACCCTACCCACAG
CACGAGCAGCCTTCGCCATACGGCCAGCCACCCTCTGAGTCCAGACCTTA
CCCGCCTTACCCTCAGCATGAAGGGTACCCTTCCCACCAGCAGCCCCCTC
CCTACTCTCCCGAGTCGTCCACCGACCCCGCCGCAGCCGGTGAAGGCGAT
AAGGGTATCATGGGCGCCCTCGCTGGCGGTGCAGCTGGTGGCTTCGCAGG
ACACAAAGTCAACCACGGCTTCCTCGGCACCATCGGCGGAGCCATGATGG
GCTCGGTAGCCGAAGACGCAGTGAAGAAACACAAGGAGAAGAAAGAGCAC
GAGGAAGAAGAACGTCGTCGCATGGAAGAGCGTCGCAGAATGGAGGAGCA
CTACAGAATGGAAGAACAGCGTCGCAGGGAGGAACAGCAGAGGATGTCTC
AGCAGCATCACCACCGACCTCCTCCGCATCACGGCGCGCCTCTGCGCGGA
AACTTCTCTGCTTCATCCCGGGATATCCGCCTTGAGAGCCACCACGATCT
AGTGGCAGCCTGTGGACGGGTCTCGGGAGAGTTGCAGCTCTCGGTACTTC
CTTTGAATAGTGTGTTGGCTAACCACTGGGGAAAGTTCGCGTGGGAGCGG
AATGGAAACTTTGCTGCGTCGGCTAGGAATGTTCGCTTGGTTGATGGGGG
ACGTGTGCTGGAGGCGGAGTTGGCGGATGGGAACGATGGCTGGAATCGGA
CCTGGATTCGTCTGGATGAGAGGATTACGAACCAGAACGGCCAGCTGATG
TTCCTGGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0019867outer membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54488ASPNIDRAFT_54488Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54488-T1.cdsASPNIDRAFT_54488-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54488-T1.utr3p1ASPNIDRAFT_54488-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54488-T1.exon1ASPNIDRAFT_54488-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54488-T1ASPNIDRAFT_54488-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000051.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR036673
DBxrefInterPro:IPR008816
DBxrefInterPro:IPR011058
DBxrefPFAM:PF05433
DBxrefPFAM:PF08881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:659940..661221 -
Powered by Drupal