You are here

Home

ASPNIDRAFT_54468-T1, ASPNIDRAFT_54468-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54468-T1
Unique NameASPNIDRAFT_54468-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:938722..940749-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54468-T1 ID=ASPNIDRAFT_54468-T1|Name=ASPNIDRAFT_54468-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2028bp|location=Sequence derived from alignment at ACJE01000005.1:938722..940749- (Aspergillus niger ATCC 1015)
TGCTCTTCTCCTCTCTATCTTTCTCTGTCCTTCCCCTTGGGCTTCTGCAC
AGGCTCCTAAGGAGGTGACATACAATGCTTCCCCCCTTTGATTACTTTAC
GTATCGTCGCATCCGGTAGGTTACCCCGTGTGCCTTCACGCAGCAACTTA
AGCAGTCCTACATAGCCCACATGCAACTTAGCCGACGGCTCACTGACCAT
TCACAGGGACCTCAAGAGGAGGGAACGGGCGGCTCGATTTGCATCGCTAT
CTCCCGATTATCATGCGCCCTTCTCGGCTATCGACAGGGTTATCATTAAC
AAGCCTATCCAGGACTTGGTATATGAGGTCCAGAATGATTCCTTGGCACC
TTTAGATGTCCTACGCACATACGGCAAGGTTGCAGTCAAGGCTCACGAAA
AGACCAATTGCGTGACTGAGCTTCTATTGCCTGAGGCAGAATCATGGGCT
CAGTCCGAAGTAAACCTAAAAGGTCCCCTGGCGGGTGTGCCTATCTCTTT
GAAAGACTCGGTGCAAGTCAAAGGATTCGATATTACTCTGGGGTATACCA
AGTTCGCGTGTAAACCGTATAAGGAGGATGGTCCAATGGCAAAGCTGTTG
AAGGATGCTGGTAGGTGACCTGTGCCGCGAAACATCACAGAAAGTATCCC
TGCGCTAATGATGAACTCCATCAGGTGCGGTCCCATATGCGAAAACGGCG
CTGCCCGTGACGCTTCTGTCGTTCGAATCAGCAAACGCTCTTTGGGGTCA
CTGCCTTAACCCACATGTCCCGGAATACTCTCCTGGCGGCTCGACGGGTG
GTGAAGGTGCTCTGCTGGCTCTTGGTGGTCGCATCGGTATCGGGTCGGAT
GTCGCTGGCTCGGTTCGCGTTCCCGCTGCCTGGAGCGGCATCTACTCCCT
CCGCTGTAGTACTGGCCGCTGGCCTAAGGTCGGAGTCAACACCAGCATGG
CTGGCCAGGAAGGTGTTGCCAGTGTCTTCAGTCCTATGGCCCGTACTTTG
AACGATCTCACCTATTTCACCAAAGCTATTGTCGGAATGAAGCCTTGGAA
CTACGACCATACCGTCCACCCTATCTCCTGGAGAGAAGATGAGGAAATTG
AAGCCCAAAACAAAAGGTTGAGGATCGGCCTCATGAGCAACGATGGTAAG
TTCCAAGAGCGGGGACATCAAGGACACTACTTGGGCCTTTCTGACCACTT
GCAGGTGTCGTTCCCCCAACGCCGGCCATTGAACGTGCTATTTCCACCAC
AGTAGCCGCCCTCACCGCCGCTGGGCATACTGTATCTGAGATCACACCCC
CCGCTGCGGCTGACACTTTTACTGGTCTCTCCCTCGCCTCGCAGCTGCTC
AACTCTGATGGGTGCGTCACGTTTAACTCGCATCTGCACAGCTTTGAGCC
ATCCGACCCTGGTGCAGATCAGCTGACGCGGATATGCAATCTGCCCCGTC
CTCTACGTTATCTCTACTACCTTTGGGTTCGGTACATCCGACGGGATGAG
AAGTGGGCGACGCTGATCCGCGGGTTTGCCCCCAAGTCTGCGGCGGAGCT
TTGGAAGCTCACTGCCCAGCGGGAAGCTTTCCGGGCGACCTGGCACAGCT
GGTGGGATGCCGAGACGCAGCAGTACGATTTCATCCTCTGCCCCGTCAAT
GCGACGCCGGCTCTGCCCCACAAAGCCATGCACGATGCGGTATCCTCATG
CGGATACACGTTCCTCTGGAACCTGCTGGACTACACAGCCGGTGTCGTGC
CTGTCTCGCACGTGGACGCGAAGAAGGATGCTCTGTCTGGTCCGTACAAG
AAGGTGCTGAAACAGCTGGGAGCCAGCAACGCGGTGGCCTACGGTGCCTG
GAAGCACTACGACGCGGCGAAGATGGCGGGATTGCCTACTGCAGTGCAGG
TGGTGGGACGCAGATGGCAGGAAGAGAAGGTGCTTGGATACATGGCGGCA
GTTGAGGAGGCCTTGGAGCAGTATCAGGACCCGGTAACTGGAGAAGGGGG
GAAATACCCATTGATTGAGCTTGACTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:938722..940749-

>ASPNIDRAFT_54468-T1 ID=ASPNIDRAFT_54468-T1|Name=ASPNIDRAFT_54468-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6960bp|location=Sequence derived from alignment at ACJE01000005.1:938722..940749- (Aspergillus niger ATCC 1015)
GTGTCGTTCCCCCAACGCCGGCCATTGAACGTGCTATTTCCACCACAGTA
GCCGCCCTCACCGCCGCTGGGCATACTGTATCTGAGATCACACCCCCCGC
TGCGGCTGACACTTTTACTGGTCTCTCCCTCGCCTCGCAGCTGCTCAACT
CTGATGGGTGCGTCACGTTTAACTCGCATCTGCACAGCTTTGAGCCATCC
GACCCTGGTGCAGATCAGCTGACGCGGATATGCAATCTGCCCCGTCCTCT
ACGTTATCTCTACTACCTTTGGGTTCGGTACATCCGACGGGATGAGAAGT
GGGCGACGCTGATCCGCGGGTTTGCCCCCAAGTCTGCGGCGGAGCTTTGG
AAGCTCACTGCCCAGCGGGAAGCTTTCCGGGCGACCTGGCACAGCTGGTG
GGATGCCGAGACGCAGCAGTACGATTTCATCCTCTGCCCCGTCAATGCGA
CGCCGGCTCTGCCCCACAAAGCCATGCACGATGCGGTATCCTCATGCGGA
TACACGTTCCTCTGGAACCTGCTGGACTACACAGCCGGTGTCGTGCCTGT
CTCGCACGTGGACGCGAAGAAGGATGCTCTGTCTGGTCCGTACAAGAAGG
TGCTGAAACAGCTGGGAGCCAGCAACGCGGTGGCCTACGGTGCCTGGAAG
CACTACGACGCGGCGAAGATGGCGGGATTGCCTACTGCAGTGCAGGTGGT
GGGACGCAGATGGCAGGAAGAGAAGGTGCTTGGATACATGGCGGCAGTTG
AGGAGGCCTTGGAGCAGTATCAGGACCCGGTAACTGGAGAAGGGGGGAAA
TACCCATTGATTGAGCTTGACTAGGTGCGGTCCCATATGCGAAAACGGCG
CTGCCCGTGACGCTTCTGTCGTTCGAATCAGCAAACGCTCTTTGGGGTCA
CTGCCTTAACCCACATGTCCCGGAATACTCTCCTGGCGGCTCGACGGGTG
GTGAAGGTGCTCTGCTGGCTCTTGGTGGTCGCATCGGTATCGGGTCGGAT
GTCGCTGGCTCGGTTCGCGTTCCCGCTGCCTGGAGCGGCATCTACTCCCT
CCGCTGTAGTACTGGCCGCTGGCCTAAGGTCGGAGTCAACACCAGCATGG
CTGGCCAGGAAGGTGTTGCCAGTGTCTTCAGTCCTATGGCCCGTACTTTG
AACGATCTCACCTATTTCACCAAAGCTATTGTCGGAATGAAGCCTTGGAA
CTACGACCATACCGTCCACCCTATCTCCTGGAGAGAAGATGAGGAAATTG
AAGCCCAAAACAAAAGGTTGAGGATCGGCCTCATGAGCAACGATGGGACC
TCAAGAGGAGGGAACGGGCGGCTCGATTTGCATCGCTATCTCCCGATTAT
CATGCGCCCTTCTCGGCTATCGACAGGGTTATCATTAACAAGCCTATCCA
GGACTTGGTATATGAGGTCCAGAATGATTCCTTGGCACCTTTAGATGTCC
TACGCACATACGGCAAGGTTGCAGTCAAGGCTCACGAAAAGACCAATTGC
GTGACTGAGCTTCTATTGCCTGAGGCAGAATCATGGGCTCAGTCCGAAGT
AAACCTAAAAGGTCCCCTGGCGGGTGTGCCTATCTCTTTGAAAGACTCGG
TGCAAGTCAAAGGATTCGATATTACTCTGGGGTATACCAAGTTCGCGTGT
AAACCGTATAAGGAGGATGGTCCAATGGCAAAGCTGTTGAAGGATGCTGA
TGCTTCCCCCCTTTGATTACTTTACGTATCGTCGCATCCGGTGTCGTTCC
CCCAACGCCGGCCATTGAACGTGCTATTTCCACCACAGTAGCCGCCCTCA
CCGCCGCTGGGCATACTGTATCTGAGATCACACCCCCCGCTGCGGCTGAC
ACTTTTACTGGTCTCTCCCTCGCCTCGCAGCTGCTCAACTCTGATGGGTG
CGTCACGTTTAACTCGCATCTGCACAGCTTTGAGCCATCCGACCCTGGTG
CAGATCAGCTGACGCGGATATGCAATCTGCCCCGTCCTCTACGTTATCTC
TACTACCTTTGGGTTCGGTACATCCGACGGGATGAGAAGTGGGCGACGCT
GATCCGCGGGTTTGCCCCCAAGTCTGCGGCGGAGCTTTGGAAGCTCACTG
CCCAGCGGGAAGCTTTCCGGGCGACCTGGCACAGCTGGTGGGATGCCGAG
ACGCAGCAGTACGATTTCATCCTCTGCCCCGTCAATGCGACGCCGGCTCT
GCCCCACAAAGCCATGCACGATGCGGTATCCTCATGCGGATACACGTTCC
TCTGGAACCTGCTGGACTACACAGCCGGTGTCGTGCCTGTCTCGCACGTG
GACGCGAAGAAGGATGCTCTGTCTGGTCCGTACAAGAAGGTGCTGAAACA
GCTGGGAGCCAGCAACGCGGTGGCCTACGGTGCCTGGAAGCACTACGACG
CGGCGAAGATGGCGGGATTGCCTACTGCAGTGCAGGTGGTGGGACGCAGA
TGGCAGGAAGAGAAGGTGCTTGGATACATGGCGGCAGTTGAGGAGGCCTT
GGAGCAGTATCAGGACCCGGTAACTGGAGAAGGGGGGAAATACCCATTGA
TTGAGCTTGACTAGGTGCGGTCCCATATGCGAAAACGGCGCTGCCCGTGA
CGCTTCTGTCGTTCGAATCAGCAAACGCTCTTTGGGGTCACTGCCTTAAC
CCACATGTCCCGGAATACTCTCCTGGCGGCTCGACGGGTGGTGAAGGTGC
TCTGCTGGCTCTTGGTGGTCGCATCGGTATCGGGTCGGATGTCGCTGGCT
CGGTTCGCGTTCCCGCTGCCTGGAGCGGCATCTACTCCCTCCGCTGTAGT
ACTGGCCGCTGGCCTAAGGTCGGAGTCAACACCAGCATGGCTGGCCAGGA
AGGTGTTGCCAGTGTCTTCAGTCCTATGGCCCGTACTTTGAACGATCTCA
CCTATTTCACCAAAGCTATTGTCGGAATGAAGCCTTGGAACTACGACCAT
ACCGTCCACCCTATCTCCTGGAGAGAAGATGAGGAAATTGAAGCCCAAAA
CAAAAGGTTGAGGATCGGCCTCATGAGCAACGATGGGACCTCAAGAGGAG
GGAACGGGCGGCTCGATTTGCATCGCTATCTCCCGATTATCATGCGCCCT
TCTCGGCTATCGACAGGGTTATCATTAACAAGCCTATCCAGGACTTGGTA
TATGAGGTCCAGAATGATTCCTTGGCACCTTTAGATGTCCTACGCACATA
CGGCAAGGTTGCAGTCAAGGCTCACGAAAAGACCAATTGCGTGACTGAGC
TTCTATTGCCTGAGGCAGAATCATGGGCTCAGTCCGAAGTAAACCTAAAA
GGTCCCCTGGCGGGTGTGCCTATCTCTTTGAAAGACTCGGTGCAAGTCAA
AGGATTCGATATTACTCTGGGGTATACCAAGTTCGCGTGTAAACCGTATA
AGGAGGATGGTCCAATGGCAAAGCTGTTGAAGGATGCTGATGCTTCCCCC
CTTTGATTACTTTACGTATCGTCGCATCCGGTGTCGTTCCCCCAACGCCG
GCCATTGAACGTGCTATTTCCACCACAGTAGCCGCCCTCACCGCCGCTGG
GCATACTGTATCTGAGATCACACCCCCCGCTGCGGCTGACACTTTTACTG
GTCTCTCCCTCGCCTCGCAGCTGCTCAACTCTGATGGGTGCGTCACGTTT
AACTCGCATCTGCACAGCTTTGAGCCATCCGACCCTGGTGCAGATCAGCT
GACGCGGATATGCAATCTGCCCCGTCCTCTACGTTATCTCTACTACCTTT
GGGTTCGGTACATCCGACGGGATGAGAAGTGGGCGACGCTGATCCGCGGG
TTTGCCCCCAAGTCTGCGGCGGAGCTTTGGAAGCTCACTGCCCAGCGGGA
AGCTTTCCGGGCGACCTGGCACAGCTGGTGGGATGCCGAGACGCAGCAGT
ACGATTTCATCCTCTGCCCCGTCAATGCGACGCCGGCTCTGCCCCACAAA
GCCATGCACGATGCGGTATCCTCATGCGGATACACGTTCCTCTGGAACCT
GCTGGACTACACAGCCGGTGTCGTGCCTGTCTCGCACGTGGACGCGAAGA
AGGATGCTCTGTCTGGTCCGTACAAGAAGGTGCTGAAACAGCTGGGAGCC
AGCAACGCGGTGGCCTACGGTGCCTGGAAGCACTACGACGCGGCGAAGAT
GGCGGGATTGCCTACTGCAGTGCAGGTGGTGGGACGCAGATGGCAGGAAG
AGAAGGTGCTTGGATACATGGCGGCAGTTGAGGAGGCCTTGGAGCAGTAT
CAGGACCCGGTAACTGGAGAAGGGGGGAAATACCCATTGATTGAGCTTGA
CTAGGTGCGGTCCCATATGCGAAAACGGCGCTGCCCGTGACGCTTCTGTC
GTTCGAATCAGCAAACGCTCTTTGGGGTCACTGCCTTAACCCACATGTCC
CGGAATACTCTCCTGGCGGCTCGACGGGTGGTGAAGGTGCTCTGCTGGCT
CTTGGTGGTCGCATCGGTATCGGGTCGGATGTCGCTGGCTCGGTTCGCGT
TCCCGCTGCCTGGAGCGGCATCTACTCCCTCCGCTGTAGTACTGGCCGCT
GGCCTAAGGTCGGAGTCAACACCAGCATGGCTGGCCAGGAAGGTGTTGCC
AGTGTCTTCAGTCCTATGGCCCGTACTTTGAACGATCTCACCTATTTCAC
CAAAGCTATTGTCGGAATGAAGCCTTGGAACTACGACCATACCGTCCACC
CTATCTCCTGGAGAGAAGATGAGGAAATTGAAGCCCAAAACAAAAGGTTG
AGGATCGGCCTCATGAGCAACGATGGGACCTCAAGAGGAGGGAACGGGCG
GCTCGATTTGCATCGCTATCTCCCGATTATCATGCGCCCTTCTCGGCTAT
CGACAGGGTTATCATTAACAAGCCTATCCAGGACTTGGTATATGAGGTCC
AGAATGATTCCTTGGCACCTTTAGATGTCCTACGCACATACGGCAAGGTT
GCAGTCAAGGCTCACGAAAAGACCAATTGCGTGACTGAGCTTCTATTGCC
TGAGGCAGAATCATGGGCTCAGTCCGAAGTAAACCTAAAAGGTCCCCTGG
CGGGTGTGCCTATCTCTTTGAAAGACTCGGTGCAAGTCAAAGGATTCGAT
ATTACTCTGGGGTATACCAAGTTCGCGTGTAAACCGTATAAGGAGGATGG
TCCAATGGCAAAGCTGTTGAAGGATGCTGATGCTTCCCCCCTTTGATTAC
TTTACGTATCGTCGCATCCGGTGTCGTTCCCCCAACGCCGGCCATTGAAC
GTGCTATTTCCACCACAGTAGCCGCCCTCACCGCCGCTGGGCATACTGTA
TCTGAGATCACACCCCCCGCTGCGGCTGACACTTTTACTGGTCTCTCCCT
CGCCTCGCAGCTGCTCAACTCTGATGGGTGCGTCACGTTTAACTCGCATC
TGCACAGCTTTGAGCCATCCGACCCTGGTGCAGATCAGCTGACGCGGATA
TGCAATCTGCCCCGTCCTCTACGTTATCTCTACTACCTTTGGGTTCGGTA
CATCCGACGGGATGAGAAGTGGGCGACGCTGATCCGCGGGTTTGCCCCCA
AGTCTGCGGCGGAGCTTTGGAAGCTCACTGCCCAGCGGGAAGCTTTCCGG
GCGACCTGGCACAGCTGGTGGGATGCCGAGACGCAGCAGTACGATTTCAT
CCTCTGCCCCGTCAATGCGACGCCGGCTCTGCCCCACAAAGCCATGCACG
ATGCGGTATCCTCATGCGGATACACGTTCCTCTGGAACCTGCTGGACTAC
ACAGCCGGTGTCGTGCCTGTCTCGCACGTGGACGCGAAGAAGGATGCTCT
GTCTGGTCCGTACAAGAAGGTGCTGAAACAGCTGGGAGCCAGCAACGCGG
TGGCCTACGGTGCCTGGAAGCACTACGACGCGGCGAAGATGGCGGGATTG
CCTACTGCAGTGCAGGTGGTGGGACGCAGATGGCAGGAAGAGAAGGTGCT
TGGATACATGGCGGCAGTTGAGGAGGCCTTGGAGCAGTATCAGGACCCGG
TAACTGGAGAAGGGGGGAAATACCCATTGATTGAGCTTGACTAGGTGCGG
TCCCATATGCGAAAACGGCGCTGCCCGTGACGCTTCTGTCGTTCGAATCA
GCAAACGCTCTTTGGGGTCACTGCCTTAACCCACATGTCCCGGAATACTC
TCCTGGCGGCTCGACGGGTGGTGAAGGTGCTCTGCTGGCTCTTGGTGGTC
GCATCGGTATCGGGTCGGATGTCGCTGGCTCGGTTCGCGTTCCCGCTGCC
TGGAGCGGCATCTACTCCCTCCGCTGTAGTACTGGCCGCTGGCCTAAGGT
CGGAGTCAACACCAGCATGGCTGGCCAGGAAGGTGTTGCCAGTGTCTTCA
GTCCTATGGCCCGTACTTTGAACGATCTCACCTATTTCACCAAAGCTATT
GTCGGAATGAAGCCTTGGAACTACGACCATACCGTCCACCCTATCTCCTG
GAGAGAAGATGAGGAAATTGAAGCCCAAAACAAAAGGTTGAGGATCGGCC
TCATGAGCAACGATGGGACCTCAAGAGGAGGGAACGGGCGGCTCGATTTG
CATCGCTATCTCCCGATTATCATGCGCCCTTCTCGGCTATCGACAGGGTT
ATCATTAACAAGCCTATCCAGGACTTGGTATATGAGGTCCAGAATGATTC
CTTGGCACCTTTAGATGTCCTACGCACATACGGCAAGGTTGCAGTCAAGG
CTCACGAAAAGACCAATTGCGTGACTGAGCTTCTATTGCCTGAGGCAGAA
TCATGGGCTCAGTCCGAAGTAAACCTAAAAGGTCCCCTGGCGGGTGTGCC
TATCTCTTTGAAAGACTCGGTGCAAGTCAAAGGATTCGATATTACTCTGG
GGTATACCAAGTTCGCGTGTAAACCGTATAAGGAGGATGGTCCAATGGCA
AAGCTGTTGAAGGATGCTGATGCTTCCCCCCTTTGATTACTTTACGTATC
GTCGCATCCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54468ASPNIDRAFT_54468Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54468-T1ASPNIDRAFT_54468-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54468-T1.cdsASPNIDRAFT_54468-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54468-T1.exon4ASPNIDRAFT_54468-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54468-T1.exon3ASPNIDRAFT_54468-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54468-T1.exon2ASPNIDRAFT_54468-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54468-T1.exon1ASPNIDRAFT_54468-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54468-T1.utr5p1ASPNIDRAFT_54468-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036928
DBxrefInterPro:IPR023631
DBxrefPFAM:PF01425
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:938722..940749 -
Powered by Drupal