You are here

Home

ASPNIDRAFT_128477-T1, ASPNIDRAFT_128477-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_128477-T1
Unique NameASPNIDRAFT_128477-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:1062081..1062370-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_128477-T1 ID=ASPNIDRAFT_128477-T1|Name=ASPNIDRAFT_128477-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=290bp|location=Sequence derived from alignment at ACJE01000005.1:1062081..1062370- (Aspergillus niger ATCC 1015)
ATGTCCCGTGCTTCCAAATTGACACTGGCCGCGACTGGTCTCGGTACGGC
GGGGATCATCTACTTTGTGCACTGGGCTCAAGAACAAGAGAAAATTGTAT
GTCATTGGTGCACTCTGACCAGATTGACTACATTAGCTAATGCATGACTC
GGATTTAGGGAATGCACAAAGCGGTCGAGCTAGACATGGAGAAACAGCGT
ATCCGCAGGGAACGACAGGCGGAGTTCGAGATGCAAAGGGCGCTCGAAGA
AGAGTACCGGAAGCTACAGAAGGTCTCGCCCAGCGTTGAC
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:1062081..1062370-

>ASPNIDRAFT_128477-T1 ID=ASPNIDRAFT_128477-T1|Name=ASPNIDRAFT_128477-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=452bp|location=Sequence derived from alignment at ACJE01000005.1:1062081..1062370- (Aspergillus niger ATCC 1015)
GGAATGCACAAAGCGGTCGAGCTAGACATGGAGAAACAGCGTATCCGCAG
GGAACGACAGGCGGAGTTCGAGATGCAAAGGGCGCTCGAAGAAGAGTACC
GGAAGCTACAGAAGGTCTCGCCCAGCGTTGATGTCCCGTGCTTCCAAATT
GACACTGGCCGCGACTGGTCTCGGTACGGCGGGGATCATCTACTTTGTGC
ACTGGGCTCAAGAACAAGAGAAAATTGGAATGCACAAAGCGGTCGAGCTA
GACATGGAGAAACAGCGTATCCGCAGGGAACGACAGGCGGAGTTCGAGAT
GCAAAGGGCGCTCGAAGAAGAGTACCGGAAGCTACAGAAGGTCTCGCCCA
GCGTTGATGTCCCGTGCTTCCAAATTGACACTGGCCGCGACTGGTCTCGG
TACGGCGGGGATCATCTACTTTGTGCACTGGGCTCAAGAACAAGAGAAAA
TT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128477ASPNIDRAFT_128477Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128477-T1ASPNIDRAFT_128477-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128477-T1.cdsASPNIDRAFT_128477-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128477-T1.utr3p1ASPNIDRAFT_128477-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128477-T1.exon2ASPNIDRAFT_128477-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_128477-T1.exon1ASPNIDRAFT_128477-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09265K5D
DBxrefInterPro:IPR031568
DBxrefPFAM:PF15786
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:1062081..1062370 -
Powered by Drupal