You are here

Home

ASPNIDRAFT_127331-T1, ASPNIDRAFT_127331-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127331-T1
Unique NameASPNIDRAFT_127331-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:115912..116706+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127331-T1 ID=ASPNIDRAFT_127331-T1|Name=ASPNIDRAFT_127331-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=795bp|location=Sequence derived from alignment at ACJE01000006.1:115912..116706+ (Aspergillus niger ATCC 1015)
ATGTCGGGGAAAATGACGTTGTATAAATTGGTGGTGCTAGGGGATGGTGG
TGTCGGAAAAACAGCCCTCACAATTCAGGTTAGCCCTTCGCGTACCCGCC
CGCACTGGTGTTCTGACAACTGATCTTTGGACCTTGGTCTTGCCCAACAG
CTTTGTCTAAACCATTTCGTTGAGACCTACGATCCGACCATCGAAGACTC
GTATCGTAAACAAGTCGTGATTGATCAACAGTCGTGCATGTTGGAAGTAC
TGGACACAGCAGGTCAAGAGGAATATACTGCGCTGAGAGACCAGTGGATC
CGTGACGGCGAAGGGTTCGTTCTCGTCTACAGCATCACCTCGAGAGCTTC
TTTCTCCCGCATACAGAAATTCTACAATCAGATCAAGATGGTCAAGGAAT
CGGCCAACTCCGGATCGCCCTCGGGGGCCAGTTACTTGGGATCCCCGATT
CACACGCCTTCAGGCCCCCCGCTTCCGGTGCCGGTCATGTTGGTTGGCAA
CAAAAGCGACAAAGCCGTCGAGCGCGCGGTTTCAGCTCAGGAGGGGCAGG
CGCTTGCCAAGGATCTCGGTTGCGAATTCGTCGAGGCCTCCGCGAAGAAT
TGCATCAATGTGGAGAAGGCATTTTACGACGTGGTCCGGATGTTGCGACA
GCAGCGCCAGCAACAGCAAGGACGGTCTCAGGATAGACGAACGACCGGTT
TGGGTGCCGGGCGTGATCCTGGTCCCGAGTATCCCAGATCATTCCGGCCC
GACCGTACGGGAAGCCATCGCCGCCCGTTCAAGTGCACAATTCTG
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:115912..116706+

>ASPNIDRAFT_127331-T1 ID=ASPNIDRAFT_127331-T1|Name=ASPNIDRAFT_127331-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1446bp|location=Sequence derived from alignment at ACJE01000006.1:115912..116706+ (Aspergillus niger ATCC 1015)
ATGTCGGGGAAAATGACGTTGTATAAATTGGTGGTGCTAGGGGATGGTGG
TGTCGGAAAAACAGCCCTCACAATTCAGCTTTGTCTAAACCATTTCGTTG
AGACCTACGATCCGACCATCGAAGACTCGTATCGTAAACAAGTCGTGATT
GATCAACAGTCGTGCATGTTGGAAGTACTGGACACAGCAGGTCAAGAGGA
ATATACTGCGCTGAGAGACCAGTGGATCCGTGACGGCGAAGGGTTCGTTC
TCGTCTACAGCATCACCTCGAGAGCTTCTTTCTCCCGCATACAGAAATTC
TACAATCAGATCAAGATGGTCAAGGAATCGGCCAACTCCGGATCGCCCTC
GGGGGCCAGTTACTTGGGATCCCCGATTCACACGCCTTCAGGCCCCCCGC
TTCCGGTGCCGGTCATGTTGGTTGGCAACAAAAGCGACAAAGCCGTCGAG
CGCGCGGTTTCAGCTCAGGAGGGGCAGGCGCTTGCCAAGGATCTCGGTTG
CGAATTCGTCGAGGCCTCCGCGAAGAATTGCATCAATGTGGAGAAGGCAT
TTTACGACGTGGTCCGGATGTTGCGACAGCAGCGCCAGCAACAGCAAGGA
CGGTCTCAGGATAGACGAACGACCGGTTTGGGTGCCGGGCGTGATCCTGG
TCCCGAGTATCCCAGATCATTCCGGCCCGACCGTACGGGAAGCCATCGCC
GCCCGTTCAAGTGCACAATTCTGATGTCGGGGAAAATGACGTTGTATAAA
TTGGTGGTGCTAGGGGATGGTGGTGTCGGAAAAACAGCCCTCACAATTCA
GCTTTGTCTAAACCATTTCGTTGAGACCTACGATCCGACCATCGAAGACT
CGTATCGTAAACAAGTCGTGATTGATCAACAGTCGTGCATGTTGGAAGTA
CTGGACACAGCAGGTCAAGAGGAATATACTGCGCTGAGAGACCAGTGGAT
CCGTGACGGCGAAGGGTTCGTTCTCGTCTACAGCATCACCTCGAGAGCTT
CTTTCTCCCGCATACAGAAATTCTACAATCAGATCAAGATGGTCAAGGAA
TCGGCCAACTCCGGATCGCCCTCGGGGGCCAGTTACTTGGGATCCCCGAT
TCACACGCCTTCAGGCCCCCCGCTTCCGGTGCCGGTCATGTTGGTTGGCA
ACAAAAGCGACAAAGCCGTCGAGCGCGCGGTTTCAGCTCAGGAGGGGCAG
GCGCTTGCCAAGGATCTCGGTTGCGAATTCGTCGAGGCCTCCGCGAAGAA
TTGCATCAATGTGGAGAAGGCATTTTACGACGTGGTCCGGATGTTGCGAC
AGCAGCGCCAGCAACAGCAAGGACGGTCTCAGGATAGACGAACGACCGGT
TTGGGTGCCGGGCGTGATCCTGGTCCCGAGTATCCCAGATCATTCCGGCC
CGACCGTACGGGAAGCCATCGCCGCCCGTTCAAGTGCACAATTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAS2ASPNIDRAFT_127331Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127331-T1.exon1ASPNIDRAFT_127331-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127331-T1.exon2ASPNIDRAFT_127331-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127331-T1.cdsASPNIDRAFT_127331-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127331-T1ASPNIDRAFT_127331-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
ProductRas GTPase ras2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:115912..116706 +
Powered by Drupal