You are here

Home

ASPNIDRAFT_202121-T1, ASPNIDRAFT_202121-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202121-T1
Unique NameASPNIDRAFT_202121-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:316081..316676-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202121-T1 ID=ASPNIDRAFT_202121-T1|Name=ASPNIDRAFT_202121-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=596bp|location=Sequence derived from alignment at ACJE01000006.1:316081..316676- (Aspergillus niger ATCC 1015)
TTCACCTGGTCGTGCTCGTCTTATGACCCTACACTAATCCTGGTGGCAGT
CCAGGTAGCCTTTTCGCAGCCAAATGGCCGACAATCGGGTTCCCATCAAT
TATCAAACGCCTCCTTTTCCGTCCCTCTACGAGCTCTTTCCGACGACCAG
TACCGGTGCATACTATCTCTACTACAATAAGGATATTTGGCGTTTTACTC
TATACTGGACCTTGATTTTCTATGGCGCAAGCCATCTACTGGTGGCGGCA
TGGGCCGTGGCCATGCAATGCCGGAGCTGGAAGGCTTGTCTTGCAGTTCC
CTTGGTATACATGGTCATAGGTGGATTAGAGGCGCTTTTAGCGGGGAGCA
TCATTGGCCTCGTGTGAGTCCTCTTGATGCTACGTTCCATACTACTGGCA
GCGAACTGACTAGTTGATAGCTTAGGTGCAGTTTACGAAGCGGGTAATTT
CAGAATGTCGACCTGGATCCCCCTTTTGTGGGGTGGTATCAATGTGTTGG
TCCTCATCCTATCTAGCTTCCCTATCCCAGGTGGATTATGACCGAAGGCA
AAACCGAAGCCTAATCGGGATACTTTCATGATCACATAACATTTCC
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:316081..316676-

>ASPNIDRAFT_202121-T1 ID=ASPNIDRAFT_202121-T1|Name=ASPNIDRAFT_202121-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=822bp|location=Sequence derived from alignment at ACJE01000006.1:316081..316676- (Aspergillus niger ATCC 1015)
CTTAGGTGCAGTTTACGAAGCGGGTAATTTCAGAATGTCGACCTGGATCC
CCCTTTTGTGGGGTGGTATCAATGTGTTGGTCCTCATCCTATCTAGCTTC
CCTATCCCAGGTGGATTATGAATGGCCGACAATCGGGTTCCCATCAATTA
TCAAACGCCTCCTTTTCCGTCCCTCTACGAGCTCTTTCCGACGACCAGTA
CCGGTGCATACTATCTCTACTACAATAAGGATATTTGGCGTTTTACTCTA
TACTGGACCTTGATTTTCTATGGCGCAAGCCATCTACTGGTGGCGGCATG
GGCCGTGGCCATGCAATGCCGGAGCTGGAAGGCTTGTCTTGCAGTTCCCT
TGGTATACATGGTCATAGGTGGATTAGAGGCGCTTTTAGCGGGGAGCATC
ATTGGCCTCGTCTTAGGTGCAGTTTACGAAGCGGGTAATTTCAGAATGTC
GACCTGGATCCCCCTTTTGTGGGGTGGTATCAATGTGTTGGTCCTCATCC
TATCTAGCTTCCCTATCCCAGGTGGATTATGAATGGCCGACAATCGGGTT
CCCATCAATTATCAAACGCCTCCTTTTCCGTCCCTCTACGAGCTCTTTCC
GACGACCAGTACCGGTGCATACTATCTCTACTACAATAAGGATATTTGGC
GTTTTACTCTATACTGGACCTTGATTTTCTATGGCGCAAGCCATCTACTG
GTGGCGGCATGGGCCGTGGCCATGCAATGCCGGAGCTGGAAGGCTTGTCT
TGCAGTTCCCTTGGTATACATGGTCATAGGTGGATTAGAGGCGCTTTTAG
CGGGGAGCATCATTGGCCTCGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202121ASPNIDRAFT_202121Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202121-T1ASPNIDRAFT_202121-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202121-T1.cdsASPNIDRAFT_202121-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202121-T1.utr3p1ASPNIDRAFT_202121-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202121-T1.exon2ASPNIDRAFT_202121-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202121-T1.exon1ASPNIDRAFT_202121-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202121-T1.utr5p1ASPNIDRAFT_202121-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019334
DBxrefPFAM:PF10190
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:316081..316676 -
Powered by Drupal