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ASPNIDRAFT_186794-T1, ASPNIDRAFT_186794-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_186794-T1
Unique NameASPNIDRAFT_186794-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:336045..337802+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_186794-T1 ID=ASPNIDRAFT_186794-T1|Name=ASPNIDRAFT_186794-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1758bp|location=Sequence derived from alignment at ACJE01000006.1:336045..337802+ (Aspergillus niger ATCC 1015)
ATGGTAGATAAGAGAGCCCGGCACGATGCTCAGCAGGAAGCGAAACGTCG
CAAGATCGAGAACGGAGAGGAGGTTAGGGCTCCTGTATATGCGACGCAAT
TCTCCAAGGAGGACATCGAGAGTGAGCAGCGCCGCCCCAAGAAGAAGGTC
GCCGTGCTGCTGGGATATTCGGGAACTGGATACAAGGGCATGCAATTGTA
TGATTACGGTCCTTTGCGGTTTATTTTAAAAAATATCGGAGCTGTTACTA
ATTGTAGGTAGGAGCGAGACGGAAAAGACCATCGAAGGAGAGCTCTTTGC
GGCTTTCGTGGCGGCTGGCGCCATCTCCAAGGCCAACGCAACCGACCCGA
AGAAGTCATCGCTGGTGCGGTGCGCGCGTACCGACAAGGGTGTCCACGCT
GCGGGAAACATTGTCTCCCTGAAGCTGATTGTCGAAGATGACGATATCAT
TCAGAAGATCAACGAGAAACTCAGCTCGCAGATTCGCGTATGGGACATCC
TCGTCACGAACAAGTCGTTCAGCAGTTATCAGCTGTGCGACTCTCGCATT
TACGAATACCTCATTCCAACTCACTGTTTCCTGCCGCCTCACCCCAGCAC
TTACCTGGGCAAGAAGCTCTTCGAGTACGCCGAGAAGGAGGGTGACCTGG
AGGGTTACAAGGCGCGACAGGAAGAGGTGGCGAGCTACTGGGAGGAGACC
GACGAGAAGTACGTCCGTCCGATCCTCGACAACACGCCCGAGGATATCCG
CAAGCTCGTCGAGAAGGTCCTCCACCTGAACGATGAGGACCAGTCCGCGC
AAGACGACATGTTCCAGACACAAGACAAGCCTGCATCAGAGGAAACCACC
GAACAGCCATCCTCCGAAGGAAAGCCCGCAGATGCTGAAAAAGACGAGGC
CGAAGAAGCGCGCCGACGTAAGATCTTCGAGACCGTCAAAGCCATCAAAG
CCGCCTATCTCCAGGCTAAGAGGGCCTACCGTATTCCGGCCCAACGCCTG
GCCCGCGTGCAGGAAGCCCTCGACAAGTACGTCGGAACGAATAACTTCTT
CAACTACACAATCCAAAAGACACATGCCGACCCATCCTCAAAACGTCACA
TCAAGTCCTTCAAGATGGCCGAACAACCCATCATCATCAACGGCACCGAG
TGGCTCAGCCTCAAGGTCCATGGCCAAAGTTTCATGATGCACCAGATCCG
CAAGATGGTCGCCATGGCTGCCATGGTCGTGCGCTGCGGCTGTGATCCCC
AGCGGATTGTCGAGACTTACGGCGCCAATAAGATCGCCATTCCCAAGGCT
CCCGGTCTGGGTCTGCTTCTTGAACGGCCCGTCTTCGACTCGTATAACCG
GAAGACCCATGAGACGGGCAAAGACCCCATCGACTTCGACAAGCATGCCG
ATACCATTAATGAGTTCAAGCAGCGTGAGATTTACGATCGTATCTTCCGT
GAGGAAGAAGAAACTCATGCGTATGTTTATCACTCCCCTGTTTTCGTTCG
TCCTTGGAGTTATTGATTCAGAACTAATGATAATATCTTTCGTTTAGTTT
CTCTGCTTTCTTTGGCCACCTCGATCACTACTCGCAAGAGGAATTCCTCT
ACGTCACGTCGGGCGGTATCCCTGCTGCCAGACTAGTCTCGGTGCCTGCT
AACGGCACGGAGGAGAAGAAGTCGCAGCGCGAGGCGTTGGCAGAGGTGGA
GGGTGCTGCGTCGGAGGATGAGGGTGCTCCTCCGAATGGGGGAGAAGAGG
GAGGTTAG
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Coding sequence (CDS) from alignment at ACJE01000006.1:336045..337802+

>ASPNIDRAFT_186794-T1 ID=ASPNIDRAFT_186794-T1|Name=ASPNIDRAFT_186794-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4851bp|location=Sequence derived from alignment at ACJE01000006.1:336045..337802+ (Aspergillus niger ATCC 1015)
ATGGTAGATAAGAGAGCCCGGCACGATGCTCAGCAGGAAGCGAAACGTCG
CAAGATCGAGAACGGAGAGGAGGTTAGGGCTCCTGTATATGCGACGCAAT
TCTCCAAGGAGGACATCGAGAGTGAGCAGCGCCGCCCCAAGAAGAAGGTC
GCCGTGCTGCTGGGATATTCGGGAACTGGATACAAGGGCATGCAATTGAG
CGAGACGGAAAAGACCATCGAAGGAGAGCTCTTTGCGGCTTTCGTGGCGG
CTGGCGCCATCTCCAAGGCCAACGCAACCGACCCGAAGAAGTCATCGCTG
GTGCGGTGCGCGCGTACCGACAAGGGTGTCCACGCTGCGGGAAACATTGT
CTCCCTGAAGCTGATTGTCGAAGATGACGATATCATTCAGAAGATCAACG
AGAAACTCAGCTCGCAGATTCGCGTATGGGACATCCTCGTCACGAACAAG
TCGTTCAGCAGTTATCAGCTGTGCGACTCTCGCATTTACGAATACCTCAT
TCCAACTCACTGTTTCCTGCCGCCTCACCCCAGCACTTACCTGGGCAAGA
AGCTCTTCGAGTACGCCGAGAAGGAGGGTGACCTGGAGGGTTACAAGGCG
CGACAGGAAGAGGTGGCGAGCTACTGGGAGGAGACCGACGAGAAGTACGT
CCGTCCGATCCTCGACAACACGCCCGAGGATATCCGCAAGCTCGTCGAGA
AGGTCCTCCACCTGAACGATGAGGACCAGTCCGCGCAAGACGACATGTTC
CAGACACAAGACAAGCCTGCATCAGAGGAAACCACCGAACAGCCATCCTC
CGAAGGAAAGCCCGCAGATGCTGAAAAAGACGAGGCCGAAGAAGCGCGCC
GACGTAAGATCTTCGAGACCGTCAAAGCCATCAAAGCCGCCTATCTCCAG
GCTAAGAGGGCCTACCGTATTCCGGCCCAACGCCTGGCCCGCGTGCAGGA
AGCCCTCGACAAGTACGTCGGAACGAATAACTTCTTCAACTACACAATCC
AAAAGACACATGCCGACCCATCCTCAAAACGTCACATCAAGTCCTTCAAG
ATGGCCGAACAACCCATCATCATCAACGGCACCGAGTGGCTCAGCCTCAA
GGTCCATGGCCAAAGTTTCATGATGCACCAGATCCGCAAGATGGTCGCCA
TGGCTGCCATGGTCGTGCGCTGCGGCTGTGATCCCCAGCGGATTGTCGAG
ACTTACGGCGCCAATAAGATCGCCATTCCCAAGGCTCCCGGTCTGGGTCT
GCTTCTTGAACGGCCCGTCTTCGACTCGTATAACCGGAAGACCCATGAGA
CGGGCAAAGACCCCATCGACTTCGACAAGCATGCCGATACCATTAATGAG
TTCAAGCAGCGTGAGATTTACGATCGTATCTTCCGTGAGGAAGAAGAAAC
TCATGCTTTCTCTGCTTTCTTTGGCCACCTCGATCACTACTCGCAAGAGG
AATTCCTCTACGTCACGTCGGGCGGTATCCCTGCTGCCAGACTAGTCTCG
GTGCCTGCTAACGGCACGGAGGAGAAGAAGTCGCAGCGCGAGGCGTTGGC
AGAGGTGGAGGGTGCTGCGTCGGAGGATGAGGGTGCTCCTCCGAATGGGG
GAGAAGAGGGAGGTTAGATGGTAGATAAGAGAGCCCGGCACGATGCTCAG
CAGGAAGCGAAACGTCGCAAGATCGAGAACGGAGAGGAGGTTAGGGCTCC
TGTATATGCGACGCAATTCTCCAAGGAGGACATCGAGAGTGAGCAGCGCC
GCCCCAAGAAGAAGGTCGCCGTGCTGCTGGGATATTCGGGAACTGGATAC
AAGGGCATGCAATTGAGCGAGACGGAAAAGACCATCGAAGGAGAGCTCTT
TGCGGCTTTCGTGGCGGCTGGCGCCATCTCCAAGGCCAACGCAACCGACC
CGAAGAAGTCATCGCTGGTGCGGTGCGCGCGTACCGACAAGGGTGTCCAC
GCTGCGGGAAACATTGTCTCCCTGAAGCTGATTGTCGAAGATGACGATAT
CATTCAGAAGATCAACGAGAAACTCAGCTCGCAGATTCGCGTATGGGACA
TCCTCGTCACGAACAAGTCGTTCAGCAGTTATCAGCTGTGCGACTCTCGC
ATTTACGAATACCTCATTCCAACTCACTGTTTCCTGCCGCCTCACCCCAG
CACTTACCTGGGCAAGAAGCTCTTCGAGTACGCCGAGAAGGAGGGTGACC
TGGAGGGTTACAAGGCGCGACAGGAAGAGGTGGCGAGCTACTGGGAGGAG
ACCGACGAGAAGTACGTCCGTCCGATCCTCGACAACACGCCCGAGGATAT
CCGCAAGCTCGTCGAGAAGGTCCTCCACCTGAACGATGAGGACCAGTCCG
CGCAAGACGACATGTTCCAGACACAAGACAAGCCTGCATCAGAGGAAACC
ACCGAACAGCCATCCTCCGAAGGAAAGCCCGCAGATGCTGAAAAAGACGA
GGCCGAAGAAGCGCGCCGACGTAAGATCTTCGAGACCGTCAAAGCCATCA
AAGCCGCCTATCTCCAGGCTAAGAGGGCCTACCGTATTCCGGCCCAACGC
CTGGCCCGCGTGCAGGAAGCCCTCGACAAGTACGTCGGAACGAATAACTT
CTTCAACTACACAATCCAAAAGACACATGCCGACCCATCCTCAAAACGTC
ACATCAAGTCCTTCAAGATGGCCGAACAACCCATCATCATCAACGGCACC
GAGTGGCTCAGCCTCAAGGTCCATGGCCAAAGTTTCATGATGCACCAGAT
CCGCAAGATGGTCGCCATGGCTGCCATGGTCGTGCGCTGCGGCTGTGATC
CCCAGCGGATTGTCGAGACTTACGGCGCCAATAAGATCGCCATTCCCAAG
GCTCCCGGTCTGGGTCTGCTTCTTGAACGGCCCGTCTTCGACTCGTATAA
CCGGAAGACCCATGAGACGGGCAAAGACCCCATCGACTTCGACAAGCATG
CCGATACCATTAATGAGTTCAAGCAGCGTGAGATTTACGATCGTATCTTC
CGTGAGGAAGAAGAAACTCATGCTTTCTCTGCTTTCTTTGGCCACCTCGA
TCACTACTCGCAAGAGGAATTCCTCTACGTCACGTCGGGCGGTATCCCTG
CTGCCAGACTAGTCTCGGTGCCTGCTAACGGCACGGAGGAGAAGAAGTCG
CAGCGCGAGGCGTTGGCAGAGGTGGAGGGTGCTGCGTCGGAGGATGAGGG
TGCTCCTCCGAATGGGGGAGAAGAGGGAGGTTAGATGGTAGATAAGAGAG
CCCGGCACGATGCTCAGCAGGAAGCGAAACGTCGCAAGATCGAGAACGGA
GAGGAGGTTAGGGCTCCTGTATATGCGACGCAATTCTCCAAGGAGGACAT
CGAGAGTGAGCAGCGCCGCCCCAAGAAGAAGGTCGCCGTGCTGCTGGGAT
ATTCGGGAACTGGATACAAGGGCATGCAATTGAGCGAGACGGAAAAGACC
ATCGAAGGAGAGCTCTTTGCGGCTTTCGTGGCGGCTGGCGCCATCTCCAA
GGCCAACGCAACCGACCCGAAGAAGTCATCGCTGGTGCGGTGCGCGCGTA
CCGACAAGGGTGTCCACGCTGCGGGAAACATTGTCTCCCTGAAGCTGATT
GTCGAAGATGACGATATCATTCAGAAGATCAACGAGAAACTCAGCTCGCA
GATTCGCGTATGGGACATCCTCGTCACGAACAAGTCGTTCAGCAGTTATC
AGCTGTGCGACTCTCGCATTTACGAATACCTCATTCCAACTCACTGTTTC
CTGCCGCCTCACCCCAGCACTTACCTGGGCAAGAAGCTCTTCGAGTACGC
CGAGAAGGAGGGTGACCTGGAGGGTTACAAGGCGCGACAGGAAGAGGTGG
CGAGCTACTGGGAGGAGACCGACGAGAAGTACGTCCGTCCGATCCTCGAC
AACACGCCCGAGGATATCCGCAAGCTCGTCGAGAAGGTCCTCCACCTGAA
CGATGAGGACCAGTCCGCGCAAGACGACATGTTCCAGACACAAGACAAGC
CTGCATCAGAGGAAACCACCGAACAGCCATCCTCCGAAGGAAAGCCCGCA
GATGCTGAAAAAGACGAGGCCGAAGAAGCGCGCCGACGTAAGATCTTCGA
GACCGTCAAAGCCATCAAAGCCGCCTATCTCCAGGCTAAGAGGGCCTACC
GTATTCCGGCCCAACGCCTGGCCCGCGTGCAGGAAGCCCTCGACAAGTAC
GTCGGAACGAATAACTTCTTCAACTACACAATCCAAAAGACACATGCCGA
CCCATCCTCAAAACGTCACATCAAGTCCTTCAAGATGGCCGAACAACCCA
TCATCATCAACGGCACCGAGTGGCTCAGCCTCAAGGTCCATGGCCAAAGT
TTCATGATGCACCAGATCCGCAAGATGGTCGCCATGGCTGCCATGGTCGT
GCGCTGCGGCTGTGATCCCCAGCGGATTGTCGAGACTTACGGCGCCAATA
AGATCGCCATTCCCAAGGCTCCCGGTCTGGGTCTGCTTCTTGAACGGCCC
GTCTTCGACTCGTATAACCGGAAGACCCATGAGACGGGCAAAGACCCCAT
CGACTTCGACAAGCATGCCGATACCATTAATGAGTTCAAGCAGCGTGAGA
TTTACGATCGTATCTTCCGTGAGGAAGAAGAAACTCATGCTTTCTCTGCT
TTCTTTGGCCACCTCGATCACTACTCGCAAGAGGAATTCCTCTACGTCAC
GTCGGGCGGTATCCCTGCTGCCAGACTAGTCTCGGTGCCTGCTAACGGCA
CGGAGGAGAAGAAGTCGCAGCGCGAGGCGTTGGCAGAGGTGGAGGGTGCT
GCGTCGGAGGATGAGGGTGCTCCTCCGAATGGGGGAGAAGAGGGAGGTTA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0031119tRNA pseudouridine synthesis
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186794ASPNIDRAFT_186794Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186794-T1.exon1ASPNIDRAFT_186794-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_186794-T1.exon2ASPNIDRAFT_186794-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_186794-T1.exon3ASPNIDRAFT_186794-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186794-T1.cdsASPNIDRAFT_186794-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186794-T1ASPNIDRAFT_186794-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020103
DBxrefInterPro:IPR041708
DBxrefInterPro:IPR020097
DBxrefInterPro:IPR001406
DBxrefInterPro:IPR020095
DBxrefPFAM:PF01416
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:336045..337802 +
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