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ASPNIDRAFT_40332-T1, ASPNIDRAFT_40332-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40332-T1
Unique NameASPNIDRAFT_40332-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:158829..159936+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40332-T1 ID=ASPNIDRAFT_40332-T1|Name=ASPNIDRAFT_40332-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1108bp|location=Sequence derived from alignment at ACJE01000008.1:158829..159936+ (Aspergillus niger ATCC 1015)
ATGGCGGGCACACCTGACGCCTCGATGGAGGAAATCCTCTGGCGGTCCCC
GCCCCACGTCCAAATGATGGGAGGATATCTCCACTCCAACAACAGTATGA
GATTTGGATCCTATAACAACAGAAGCAGCCAACTAACACTGTTAATGTAT
AAACAGTTCTTTTCTACTTCGCAGAGTCACCATTTTTTGACCCGACGTCG
AATAACGCCTCACTGGCCATCCAAGCGAACTACAATGAAGCTTTCCGGCA
CTTTGTGGAGACGCGCGAGGCCTTCGAGGGCCGCCTGAAGACTATGCAGG
GCTTGGAATTCGTGGTTTCATATGATCCCATTCAGGCAGCAGCACAACCT
GATGGTCGATTTGCACACGAGCCGTCGAACATTTGGGTGATTCGCAAGCA
GAACCGGCGCAAGAGGACCGGCCTGGACGATGAGGTGGCGGTTTTATCAA
CGTACTTTATCGTGGGAGACTGCATCTACATGGCCCCGTCGGTTGCGAGT
GTAGTGGGAAACCGCATCGTACGTCACATCGGATCTTGTTTTGCTTCCAG
TATATCCTATAATGCTGATGCTAACCCCGACTTCTTGCGCAGCTGTCCGC
AGTTACGTCTCTCACCAGCTTGCTAAAGACAGCATCTACACTCCCAACCT
TCACCCCGTCCCATGGCCATACTTACATGCCGCCTGCACTCAAGCAAGCA
GACGCAAGTCAACCTGGCACCCAATCGCAGCAGAGCAAGGAAAACACACC
ACTGCCAGACGCCGATGCAGCTGGCAAAGCCTCACTCGTTGGATCTTCAC
AGATGGTCGGCGCTGGTTCTAGCCTGCAAGACACGCGGACACTCGCAGAG
TCATTCAATCTGCTCCGAAGGTATGGGGATGAGTTCATGGACGAACATCC
GTTGGTGGGAGAGCCCGGATCATTCATCCTATCCCGAGTCAATGACACAG
ACCGAACCTCGGCGGCGAAACCGCCAGCCACTGCCGCGAAGGTTGGAACG
CCGCAGGTCCGGGTTGATACACCGGGAAAGGTATCAGAGAAGGGGGCGAC
GCCATCGGGGTCCGAAGAGAATAAAATGCGGAAGAAGAAAACTAAGGTTG
GCAGTTGA
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Coding sequence (CDS) from alignment at ACJE01000008.1:158829..159936+

>ASPNIDRAFT_40332-T1 ID=ASPNIDRAFT_40332-T1|Name=ASPNIDRAFT_40332-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2916bp|location=Sequence derived from alignment at ACJE01000008.1:158829..159936+ (Aspergillus niger ATCC 1015)
ATGGCGGGCACACCTGACGCCTCGATGGAGGAAATCCTCTGGCGGTCCCC
GCCCCACGTCCAAATGATGGGAGGATATCTCCACTCCAACAACATTCTTT
TCTACTTCGCAGAGTCACCATTTTTTGACCCGACGTCGAATAACGCCTCA
CTGGCCATCCAAGCGAACTACAATGAAGCTTTCCGGCACTTTGTGGAGAC
GCGCGAGGCCTTCGAGGGCCGCCTGAAGACTATGCAGGGCTTGGAATTCG
TGGTTTCATATGATCCCATTCAGGCAGCAGCACAACCTGATGGTCGATTT
GCACACGAGCCGTCGAACATTTGGGTGATTCGCAAGCAGAACCGGCGCAA
GAGGACCGGCCTGGACGATGAGGTGGCGGTTTTATCAACGTACTTTATCG
TGGGAGACTGCATCTACATGGCCCCGTCGGTTGCGAGTGTAGTGGGAAAC
CGCATCCTGTCCGCAGTTACGTCTCTCACCAGCTTGCTAAAGACAGCATC
TACACTCCCAACCTTCACCCCGTCCCATGGCCATACTTACATGCCGCCTG
CACTCAAGCAAGCAGACGCAAGTCAACCTGGCACCCAATCGCAGCAGAGC
AAGGAAAACACACCACTGCCAGACGCCGATGCAGCTGGCAAAGCCTCACT
CGTTGGATCTTCACAGATGGTCGGCGCTGGTTCTAGCCTGCAAGACACGC
GGACACTCGCAGAGTCATTCAATCTGCTCCGAAGGTATGGGGATGAGTTC
ATGGACGAACATCCGTTGGTGGGAGAGCCCGGATCATTCATCCTATCCCG
AGTCAATGACACAGACCGAACCTCGGCGGCGAAACCGCCAGCCACTGCCG
CGAAGGTTGGAACGCCGCAGGTCCGGGTTGATACACCGGGAAAGGTATCA
GAGAAGGGGGCGACGCCATCGGGGTCCGAAGAGAATAAAATGCGGAAGAA
GAAAACTAAGGTTGGCAGTTGAATGGCGGGCACACCTGACGCCTCGATGG
AGGAAATCCTCTGGCGGTCCCCGCCCCACGTCCAAATGATGGGAGGATAT
CTCCACTCCAACAACATTCTTTTCTACTTCGCAGAGTCACCATTTTTTGA
CCCGACGTCGAATAACGCCTCACTGGCCATCCAAGCGAACTACAATGAAG
CTTTCCGGCACTTTGTGGAGACGCGCGAGGCCTTCGAGGGCCGCCTGAAG
ACTATGCAGGGCTTGGAATTCGTGGTTTCATATGATCCCATTCAGGCAGC
AGCACAACCTGATGGTCGATTTGCACACGAGCCGTCGAACATTTGGGTGA
TTCGCAAGCAGAACCGGCGCAAGAGGACCGGCCTGGACGATGAGGTGGCG
GTTTTATCAACGTACTTTATCGTGGGAGACTGCATCTACATGGCCCCGTC
GGTTGCGAGTGTAGTGGGAAACCGCATCCTGTCCGCAGTTACGTCTCTCA
CCAGCTTGCTAAAGACAGCATCTACACTCCCAACCTTCACCCCGTCCCAT
GGCCATACTTACATGCCGCCTGCACTCAAGCAAGCAGACGCAAGTCAACC
TGGCACCCAATCGCAGCAGAGCAAGGAAAACACACCACTGCCAGACGCCG
ATGCAGCTGGCAAAGCCTCACTCGTTGGATCTTCACAGATGGTCGGCGCT
GGTTCTAGCCTGCAAGACACGCGGACACTCGCAGAGTCATTCAATCTGCT
CCGAAGGTATGGGGATGAGTTCATGGACGAACATCCGTTGGTGGGAGAGC
CCGGATCATTCATCCTATCCCGAGTCAATGACACAGACCGAACCTCGGCG
GCGAAACCGCCAGCCACTGCCGCGAAGGTTGGAACGCCGCAGGTCCGGGT
TGATACACCGGGAAAGGTATCAGAGAAGGGGGCGACGCCATCGGGGTCCG
AAGAGAATAAAATGCGGAAGAAGAAAACTAAGGTTGGCAGTTGAATGGCG
GGCACACCTGACGCCTCGATGGAGGAAATCCTCTGGCGGTCCCCGCCCCA
CGTCCAAATGATGGGAGGATATCTCCACTCCAACAACATTCTTTTCTACT
TCGCAGAGTCACCATTTTTTGACCCGACGTCGAATAACGCCTCACTGGCC
ATCCAAGCGAACTACAATGAAGCTTTCCGGCACTTTGTGGAGACGCGCGA
GGCCTTCGAGGGCCGCCTGAAGACTATGCAGGGCTTGGAATTCGTGGTTT
CATATGATCCCATTCAGGCAGCAGCACAACCTGATGGTCGATTTGCACAC
GAGCCGTCGAACATTTGGGTGATTCGCAAGCAGAACCGGCGCAAGAGGAC
CGGCCTGGACGATGAGGTGGCGGTTTTATCAACGTACTTTATCGTGGGAG
ACTGCATCTACATGGCCCCGTCGGTTGCGAGTGTAGTGGGAAACCGCATC
CTGTCCGCAGTTACGTCTCTCACCAGCTTGCTAAAGACAGCATCTACACT
CCCAACCTTCACCCCGTCCCATGGCCATACTTACATGCCGCCTGCACTCA
AGCAAGCAGACGCAAGTCAACCTGGCACCCAATCGCAGCAGAGCAAGGAA
AACACACCACTGCCAGACGCCGATGCAGCTGGCAAAGCCTCACTCGTTGG
ATCTTCACAGATGGTCGGCGCTGGTTCTAGCCTGCAAGACACGCGGACAC
TCGCAGAGTCATTCAATCTGCTCCGAAGGTATGGGGATGAGTTCATGGAC
GAACATCCGTTGGTGGGAGAGCCCGGATCATTCATCCTATCCCGAGTCAA
TGACACAGACCGAACCTCGGCGGCGAAACCGCCAGCCACTGCCGCGAAGG
TTGGAACGCCGCAGGTCCGGGTTGATACACCGGGAAAGGTATCAGAGAAG
GGGGCGACGCCATCGGGGTCCGAAGAGAATAAAATGCGGAAGAAGAAAAC
TAAGGTTGGCAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED6ASPNIDRAFT_40332Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40332-T1.exon1ASPNIDRAFT_40332-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40332-T1.exon2ASPNIDRAFT_40332-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40332-T1.exon3ASPNIDRAFT_40332-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40332-T1.cdsASPNIDRAFT_40332-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40332-T1ASPNIDRAFT_40332-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264S40
DBxrefInterPro:IPR007018
DBxrefInterPro:IPR016612
DBxrefInterPro:IPR038566
DBxrefPFAM:PF04934
ProductMediator of RNA polymerase II transcription subunit 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:158829..159936 +
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