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ASPNIDRAFT_53423-T1, ASPNIDRAFT_53423-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53423-T1
Unique NameASPNIDRAFT_53423-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:500614..502738+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53423-T1 ID=ASPNIDRAFT_53423-T1|Name=ASPNIDRAFT_53423-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2125bp|location=Sequence derived from alignment at ACJE01000008.1:500614..502738+ (Aspergillus niger ATCC 1015)
CTAAATACTACTACTTTACTCATCCCCCCCATTTTCTCCGTGCTTTCCGC
CCTGTCTTTCTTTCTTCTCCTTCTCTCCCTCTCCAATTCGGCGGCATTGC
TGCATCCTCCTCCATTCATTGCATCGTCTTGGGTATCATCATGTCTGCCT
CTTGTTCAGCGTTGAGACGGCTGACCCACAGGTCTCCCCGCACTTGGCCC
TCCCGCATCTCCTCCGTCTCCAGGCCTGCATCTTCTCTTTCCTCCGTTGC
TCGTCCGAGTCGCAGCACACCCTCAACTTTTTCTCACATCTCTCGATTTT
CCACCATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGATAAG
CCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACTACAA
TGTGAACTCGGACTTGGCGGTACGAGGGTTCTCCCATGTTTTGATTGACT
TTCTTCTGTGTGCGATGGACTAATTGAAGACATCCTGACTTTTAGTATGA
CACCGCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCAT
TGAAGTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACC
GTGGTGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCC
TGTCAACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACA
ACGACTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGT
GGAATCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGG
AAACATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCA
TGATCAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTC
AACAAGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGC
TGTCGTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGA
TTACCCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCC
CCCAACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCG
GGCCGTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACA
CCGTCCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGC
AACAAGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGT
TCTGTTCAAGGTCTCCTACCCGGGTAAGTCTAACATCAGACGTCAGTATG
GAGGGAATACTAACAGTTGCCATGATAGCCGAGTTCCACTCCCAGACCGC
GATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAAAGA
CTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGCATT
CGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCGTGA
CCACTGTGTTCAGGTAGGTCCTGCCGTATCCAAAATTTGAGTGTCATGCA
CCACGCATACTGACAACCGCGCCAGTACATGGTTGCGACCATGTTGGTCT
TCAACCGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACT
TCTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCC
CCAGTTCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACG
CCCTTACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTC
GAGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGAT
TCTGGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCA
TTGACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTAC
GACGTTGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGC
TCAGTAGAGTCATGATTGTATATGCGGCATGGAGAAATTATACCATAATC
AGAAGCGAGACTTTGGAGACATCGTGTATGAGATTAACGAGAATTAGCCA
CTGATAGAATACATTGAATTACCAT
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Coding sequence (CDS) from alignment at ACJE01000008.1:500614..502738+

>ASPNIDRAFT_53423-T1 ID=ASPNIDRAFT_53423-T1|Name=ASPNIDRAFT_53423-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6696bp|location=Sequence derived from alignment at ACJE01000008.1:500614..502738+ (Aspergillus niger ATCC 1015)
ATGTCTGCCTCTTGTTCAGCGTTGAGACGGCTGACCCACAGGTCTCCCCG
CACTTGGCCCTCCCGCATCTCCTCCGTCTCCAGGCCTGCATCTTCTCTTT
CCTCCGTTGCTCGTCCGAGTCGCAGCACACCCTCAACTTTTTCTCACATC
TCTCGATTTTCCACCATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCC
CGGCGATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCC
ACAACTACAATGTGAACTCGGACTTGGCGTATGACACCGCCCGTTTGGTG
TTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATG
CTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAA
CTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTC
AACATTGGCGCTATGATCCGCTGGCTGGACTACAACGACTGCTGGTTGGC
TGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCG
CCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACATTGCCAACGGC
AAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGA
GATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGG
ACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATG
CTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACCCAAGCATTCGT
GGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAACACCATGTCGA
GGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTC
TTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCC
CGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCC
AGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCC
TACCCGGCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATGGT
TAACGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGA
TCAGAAACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGTTC
AAGGCGATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTACATGGT
TGCGACCATGTTGGTCTTCAACCGGTTGACTGCCAACGACTACGCCGACG
GATCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCAAGCGCATT
TACTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCACGACCCTGCGAA
GCGCACCATCCCCAACGCCCTTACCGTTACTCTGAATGACGGAACGGTGC
TGGATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGCGGCGTGAG
GAGGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTGCAGGCGCA
CTTTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTGGGACCAGG
CCGCTCTTGAGGGCTACGACGTTGACCAGTACGTCGACTTGTATGTCAAG
GACCAGATGGTGGCAGCTCAGTAGATGTCTGCCTCTTGTTCAGCGTTGAG
ACGGCTGACCCACAGGTCTCCCCGCACTTGGCCCTCCCGCATCTCCTCCG
TCTCCAGGCCTGCATCTTCTCTTTCCTCCGTTGCTCGTCCGAGTCGCAGC
ACACCCTCAACTTTTTCTCACATCTCTCGATTTTCCACCATGTCTCCCCT
TCAACATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTACGACCCAGAGA
TCAAGGATATGGCCGACTATATCCACAACTACAATGTGAACTCGGACTTG
GCGTATGACACCGCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTT
GGAGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGG
ACGGCACCGTGGTGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAG
CTGGACCCTGTCAACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCT
GGACTACAACGACTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACA
ACCTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGT
GCGGGCGGAAACATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCT
GGAGGCCATGATCAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGA
ACTCCTTCAACAAGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCT
ACCACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGC
AGATGCGATTACCCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACA
GACACTCCCCCAACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCA
TGCCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGG
CCTGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGT
TCAAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATG
GAGAATGTTCTGTTCAAGGTCTCCTACCCGGCCGAGTTCCACTCCCAGAC
CGCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAA
AGACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGC
ATTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCG
TGACCACTGTGTTCAGTACATGGTTGCGACCATGTTGGTCTTCAACCGGT
TGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTTCTCAGCTC
CTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCAGTTCAC
TAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGCCCTTACCG
TTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGCACCC
TTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGGCCAA
GTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTGACCAGC
TGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGACGTTGAC
CAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCAGTAGAT
GTCTGCCTCTTGTTCAGCGTTGAGACGGCTGACCCACAGGTCTCCCCGCA
CTTGGCCCTCCCGCATCTCCTCCGTCTCCAGGCCTGCATCTTCTCTTTCC
TCCGTTGCTCGTCCGAGTCGCAGCACACCCTCAACTTTTTCTCACATCTC
TCGATTTTCCACCATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCG
GCGATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCAC
AACTACAATGTGAACTCGGACTTGGCGTATGACACCGCCCGTTTGGTGTT
CCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCT
CCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACT
CGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAA
CATTGGCGCTATGATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTG
CTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCC
GACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAA
GATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGA
TTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGAC
CACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCT
CGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGG
ACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAACACCATGTCGAGG
AAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTT
GAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCG
TTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAG
CGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTA
CCCGGCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTTA
ACGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGATC
AGAAACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGTTCAA
GGCGATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTACATGGTTG
CGACCATGTTGGTCTTCAACCGGTTGACTGCCAACGACTACGCCGACGGA
TCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTA
CTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCACGACCCTGCGAAGC
GCACCATCCCCAACGCCCTTACCGTTACTCTGAATGACGGAACGGTGCTG
GATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGA
GGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTGCAGGCGCACT
TTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTGGGACCAGGCC
GCTCTTGAGGGCTACGACGTTGACCAGTACGTCGACTTGTATGTCAAGGA
CCAGATGGTGGCAGCTCAGTAGATGTCTGCCTCTTGTTCAGCGTTGAGAC
GGCTGACCCACAGGTCTCCCCGCACTTGGCCCTCCCGCATCTCCTCCGTC
TCCAGGCCTGCATCTTCTCTTTCCTCCGTTGCTCGTCCGAGTCGCAGCAC
ACCCTCAACTTTTTCTCACATCTCTCGATTTTCCACCATGTCTCCCCTTC
AACATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTACGACCCAGAGATC
AAGGATATGGCCGACTATATCCACAACTACAATGTGAACTCGGACTTGGC
GTATGACACCGCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGG
AGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGAC
GGCACCGTGGTGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCT
GGACCCTGTCAACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGG
ACTACAACGACTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAAC
CTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGC
GGGCGGAAACATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGG
AGGCCATGATCAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAAC
TCCTTCAACAAGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTAC
CACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAG
ATGCGATTACCCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGA
CACTCCCCCAACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATG
CCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCC
TGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTC
AAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGA
GAATGTTCTGTTCAAGGTCTCCTACCCGGCCGAGTTCCACTCCCAGACCG
CGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAAAG
ACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGCAT
TCGTATCATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCGTG
ACCACTGTGTTCAGTACATGGTTGCGACCATGTTGGTCTTCAACCGGTTG
ACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTTCTCAGCTCCT
GGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCAGTTCACTA
AGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGCCCTTACCGTT
ACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGCACCCTT
GGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGGCCAAGT
ACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTGACCAGCTG
ATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGACGTTGACCA
GTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDH1ASPNIDRAFT_53423Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53423-T1ASPNIDRAFT_53423-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53423-T1.utr5p1ASPNIDRAFT_53423-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53423-T1.exon1ASPNIDRAFT_53423-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53423-T1.exon2ASPNIDRAFT_53423-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53423-T1.exon3ASPNIDRAFT_53423-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53423-T1.exon4ASPNIDRAFT_53423-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53423-T1.cdsASPNIDRAFT_53423-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53423-T1.utr3p1ASPNIDRAFT_53423-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR012705
DBxrefPFAM:PF03972
ProductATP-binding cassette transporter CGR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:500614..502738 +
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