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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:947934..949936+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53463-T1 ID=ASPNIDRAFT_53463-T1|Name=ASPNIDRAFT_53463-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2003bp|location=Sequence derived from alignment at ACJE01000008.1:947934..949936+ (Aspergillus niger ATCC 1015)
CTCTTCTCTCCTCCTCTTTTCCAGCTTGTTCGCGTTTCCTCCTAGTTTTG
CTTGGTATACTGCTCGGCGGACCTTCGCATATGAACAGCTACAACCACGC
CTAGACTGGGAGTCTGCCGTCATCCGTCCCTTTTCTCGTCCATTTTCGCG
CCAGTGAGCGCAAGACCTCAACTATCATGGGTCTCTCCAAGACAAACAGG
ATCTTGATCCTGTTGGCGATTGATACGGCATTTTTCTTGTTGGAATTGAT
TGCCGGTTTGTCTTCATACTGTTATAAGCTCCCAGGCGCCTCTAACGATA
ATTTTCCGCGCAGGTTATTCTGTTCACTCCCTTGCCCTGGTTGCCGACTC
GTTTCACATGGTACGCTTGGCCTCATCCTTCTACCCGAAAGCCCTAGGTA
GCATAATTCTGACGAGTATCGGTACAGCTGAATGATGTATTATCACTGTG
TGTGGGACTCTGGGCTGTCAAGGTCGCCAACCGCGAAACCAACTCGAAAA
TGTACACTTACGGGGTAAGCTTGACTCACTCCCACATATCCACTGCTCAT
CCTGACGGTCTGGTTATCTAGTGGCAACGCGCAGAAACTCTTGGTGCCTT
AGTCAATGGCGTCTTCCTGGTCGCCCTGTGTCTATCGATTTTCCTGGAAG
CTATACAAAGACTCGTTGAGCCTCAGGAAGTCAAAAACCCGAAATTCGTC
TGCATCGTCGGATGTCTCGGCTTGTTGTCAAACATAATTGGCCTTGTGCT
GTTCCATGACCACTCCCACGGGCACGGCCACAGTCATGGCCCTGGAGATC
TGGAAGAAGGCGCAGATGTTGATCATGTGCACGCTGGGGAGCATGACCAC
GATCATGACCACGTGCACGCAGATGGCCAGAATAACGTTAGTGGACCAGT
ATCTATCAAATCTATGAAGCTGACAACATGTGGATTAAGCAGACTGGTGG
TGCCGAGCCACACTCTCCCTATTCGCGTCGCCGCCGGACCCTCGATAGTC
AACGTCGTCGCTACAGTGGATATGTTGACCCGGCAGACATCCAGATTCAC
CCCGCTAGTATGAGACAGGAGATTATCGCAGCCAGTAAAACCCGTTATGA
TGATGAACAATCCGGCTCGGACAGCGAGTTCCAAGAGGGCGCCGATAGCC
AGCCATCTGAGCGCTCAGCCCTCCTTGGTCAAGGCGGTCGTACTGGTAAA
TATACCGACGAGACGGAGTCATCTGCCCGATCCCGGACTGCGGCAGCTGA
TGAGGATCTCCACAAATTCCACAACCATGCTCAACCAAAGCCCAAAGACG
AAAAGCATGGCCATGGCCATGGTCACGATCTCAATATGCGGGGCGTTTTC
CTTCATGTGATGGGCGATGCACTGGGCAACATCGGCGTCATCGCTTCTGC
TCTTATCATCTGGTTGACCGATTATTCTTGGAGATTCTACGTGGATCCTG
GGATTTCGCTTGTTATCACTGTGATCATTCTGCTCTCCGCCATTCCCCTA
TGCAAGGCTGCGTCCCGAATTCTCTTGCAGGCAGCGCCCCACGGCCTGAG
CATCGACCATATCAAGGAGGACATCGAAGGACTTCCAGGCGTCATCGGCT
CCCACCACCTGCACGTATGGCAGCTGAGCGACACCAAGTTAGTCGCCTCT
ATCCATATCCAAGTGGACACGGAGATCAAGGGCGAAGGCTCAGAACGCTA
TATGCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGCACGCTTATGGAATCC
ATTCGTCGACGATCCAGCCGGAGTTTGCGCCTGACAGTGACACTGAGGAC
ACAATTGCGGCCCCCTCGGACTGCCGTGGCGGCAGCAACGGAGCCTCCGC
CTCGGGGACGCTTCCCAGTCGAGCACCCAGTGTACCTGATGGTGATCCGC
AGGCGTGCCTCCTGGAATGTGGCGAGGAGTGTGCCAGGGGTGGCCAGTGT
TGCCCCAAGCAATCGCCGTGAGGTGATTCGATACCAATTCTACCTCCCCT
ATG back to topCoding sequence (CDS) from alignment at ACJE01000008.1:947934..949936+ >ASPNIDRAFT_53463-T1 ID=ASPNIDRAFT_53463-T1|Name=ASPNIDRAFT_53463-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7920bp|location=Sequence derived from alignment at ACJE01000008.1:947934..949936+ (Aspergillus niger ATCC 1015)
ATGGGTCTCTCCAAGACAAACAGGATCTTGATCCTGTTGGCGATTGATAC
GGCATTTTTCTTGTTGGAATTGATTGCCGGTTATTCTGTTCACTCCCTTG
CCCTGGTTGCCGACTCGTTTCACATGCTGAATGATGTATTATCACTGTGT
GTGGGACTCTGGGCTGTCAAGGTCGCCAACCGCGAAACCAACTCGAAAAT
GTACACTTACGGGTGGCAACGCGCAGAAACTCTTGGTGCCTTAGTCAATG
GCGTCTTCCTGGTCGCCCTGTGTCTATCGATTTTCCTGGAAGCTATACAA
AGACTCGTTGAGCCTCAGGAAGTCAAAAACCCGAAATTCGTCTGCATCGT
CGGATGTCTCGGCTTGTTGTCAAACATAATTGGCCTTGTGCTGTTCCATG
ACCACTCCCACGGGCACGGCCACAGTCATGGCCCTGGAGATCTGGAAGAA
GGCGCAGATGTTGATCATGTGCACGCTGGGGAGCATGACCACGATCATGA
CCACTGGACCAGTATCTATCAAATCTATGAAGCTGACAACATGTGGATTA
AGCAGACTGGTGGTGCCGAGCCACACTCTCCCTATTCGCGTCGCCGCCGG
ACCCTCGATAGTCAACGTCGTCGCTACAGTGGATATGTTGACCCGGCAGA
CATCCAGATTCACCCCGCTAGTATGAGACAGGAGATTATCGCAGCCAGTA
AAACCCGTTATGATGATGAACAATCCGGCTCGGACAGCGAGTTCCAAGAG
GGCGCCGATAGCCAGCCATCTGAGCGCTCAGCCCTCCTTGGTCAAGGCGG
TCGTACTGGTAAATATACCGACGAGACGGAGTCATCTGCCCGATCCCGGA
CTGCGGCAGCTGATGAGGATCTCCACAAATTCCACAACCATGCTCAACCA
AAGCCCAAAGACGAAAAGCATGGCCATGGCCATGGTCACGATCTCAATAT
GCGGGGCGTTTTCCTTCATGTGATGGGCGATGCACTGGGCAACATCGGCG
TCATCGCTTCTGCTCTTATCATCTGGTTGACCGATTATTCTTGGAGATTC
TACGTGGATCCTGGGATTTCGCTTGTTATCACTGTGATCATTCTGCTCTC
CGCCATTCCCCTATGCAAGGCTGCGTCCCGAATTCTCTTGCAGGCAGCGC
CCCACGGCCTGAGCATCGACCATATCAAGGAGGACATCGAAGGACTTCCA
GGCGTCATCGGCTCCCACCACCTGCACGTATGGCAGCTGAGCGACACCAA
GTTAGTCGCCTCTATCCATATCCAAGTGGACACGGAGATCAAGGGCGAAG
GCTCAGAACGCTATATGCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGCAC
GCTTATGGAATCCATTCGTCGACGATCCAGCCGGAGTTTGCGCCTGACAG
TGACACTGAGGACACAATTGCGGCCCCCTCGGACTGCCGTGGCGGCAGCA
ACGGAGCCTCCGCCTCGGGGACGCTTCCCAGTCGAGCACCCAGTGTACCT
GATGGTGATCCGCAGGCGTGCCTCCTGGAATGTGGCGAGGAGTGTGCCAG
GGGTGGCCAGTGTTGCCCCAAGCAATCGCCGTGAATGGGTCTCTCCAAGA
CAAACAGGATCTTGATCCTGTTGGCGATTGATACGGCATTTTTCTTGTTG
GAATTGATTGCCGGTTATTCTGTTCACTCCCTTGCCCTGGTTGCCGACTC
GTTTCACATGCTGAATGATGTATTATCACTGTGTGTGGGACTCTGGGCTG
TCAAGGTCGCCAACCGCGAAACCAACTCGAAAATGTACACTTACGGGTGG
CAACGCGCAGAAACTCTTGGTGCCTTAGTCAATGGCGTCTTCCTGGTCGC
CCTGTGTCTATCGATTTTCCTGGAAGCTATACAAAGACTCGTTGAGCCTC
AGGAAGTCAAAAACCCGAAATTCGTCTGCATCGTCGGATGTCTCGGCTTG
TTGTCAAACATAATTGGCCTTGTGCTGTTCCATGACCACTCCCACGGGCA
CGGCCACAGTCATGGCCCTGGAGATCTGGAAGAAGGCGCAGATGTTGATC
ATGTGCACGCTGGGGAGCATGACCACGATCATGACCACTGGACCAGTATC
TATCAAATCTATGAAGCTGACAACATGTGGATTAAGCAGACTGGTGGTGC
CGAGCCACACTCTCCCTATTCGCGTCGCCGCCGGACCCTCGATAGTCAAC
GTCGTCGCTACAGTGGATATGTTGACCCGGCAGACATCCAGATTCACCCC
GCTAGTATGAGACAGGAGATTATCGCAGCCAGTAAAACCCGTTATGATGA
TGAACAATCCGGCTCGGACAGCGAGTTCCAAGAGGGCGCCGATAGCCAGC
CATCTGAGCGCTCAGCCCTCCTTGGTCAAGGCGGTCGTACTGGTAAATAT
ACCGACGAGACGGAGTCATCTGCCCGATCCCGGACTGCGGCAGCTGATGA
GGATCTCCACAAATTCCACAACCATGCTCAACCAAAGCCCAAAGACGAAA
AGCATGGCCATGGCCATGGTCACGATCTCAATATGCGGGGCGTTTTCCTT
CATGTGATGGGCGATGCACTGGGCAACATCGGCGTCATCGCTTCTGCTCT
TATCATCTGGTTGACCGATTATTCTTGGAGATTCTACGTGGATCCTGGGA
TTTCGCTTGTTATCACTGTGATCATTCTGCTCTCCGCCATTCCCCTATGC
AAGGCTGCGTCCCGAATTCTCTTGCAGGCAGCGCCCCACGGCCTGAGCAT
CGACCATATCAAGGAGGACATCGAAGGACTTCCAGGCGTCATCGGCTCCC
ACCACCTGCACGTATGGCAGCTGAGCGACACCAAGTTAGTCGCCTCTATC
CATATCCAAGTGGACACGGAGATCAAGGGCGAAGGCTCAGAACGCTATAT
GCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGCACGCTTATGGAATCCATT
CGTCGACGATCCAGCCGGAGTTTGCGCCTGACAGTGACACTGAGGACACA
ATTGCGGCCCCCTCGGACTGCCGTGGCGGCAGCAACGGAGCCTCCGCCTC
GGGGACGCTTCCCAGTCGAGCACCCAGTGTACCTGATGGTGATCCGCAGG
CGTGCCTCCTGGAATGTGGCGAGGAGTGTGCCAGGGGTGGCCAGTGTTGC
CCCAAGCAATCGCCGTGAATGGGTCTCTCCAAGACAAACAGGATCTTGAT
CCTGTTGGCGATTGATACGGCATTTTTCTTGTTGGAATTGATTGCCGGTT
ATTCTGTTCACTCCCTTGCCCTGGTTGCCGACTCGTTTCACATGCTGAAT
GATGTATTATCACTGTGTGTGGGACTCTGGGCTGTCAAGGTCGCCAACCG
CGAAACCAACTCGAAAATGTACACTTACGGGTGGCAACGCGCAGAAACTC
TTGGTGCCTTAGTCAATGGCGTCTTCCTGGTCGCCCTGTGTCTATCGATT
TTCCTGGAAGCTATACAAAGACTCGTTGAGCCTCAGGAAGTCAAAAACCC
GAAATTCGTCTGCATCGTCGGATGTCTCGGCTTGTTGTCAAACATAATTG
GCCTTGTGCTGTTCCATGACCACTCCCACGGGCACGGCCACAGTCATGGC
CCTGGAGATCTGGAAGAAGGCGCAGATGTTGATCATGTGCACGCTGGGGA
GCATGACCACGATCATGACCACTGGACCAGTATCTATCAAATCTATGAAG
CTGACAACATGTGGATTAAGCAGACTGGTGGTGCCGAGCCACACTCTCCC
TATTCGCGTCGCCGCCGGACCCTCGATAGTCAACGTCGTCGCTACAGTGG
ATATGTTGACCCGGCAGACATCCAGATTCACCCCGCTAGTATGAGACAGG
AGATTATCGCAGCCAGTAAAACCCGTTATGATGATGAACAATCCGGCTCG
GACAGCGAGTTCCAAGAGGGCGCCGATAGCCAGCCATCTGAGCGCTCAGC
CCTCCTTGGTCAAGGCGGTCGTACTGGTAAATATACCGACGAGACGGAGT
CATCTGCCCGATCCCGGACTGCGGCAGCTGATGAGGATCTCCACAAATTC
CACAACCATGCTCAACCAAAGCCCAAAGACGAAAAGCATGGCCATGGCCA
TGGTCACGATCTCAATATGCGGGGCGTTTTCCTTCATGTGATGGGCGATG
CACTGGGCAACATCGGCGTCATCGCTTCTGCTCTTATCATCTGGTTGACC
GATTATTCTTGGAGATTCTACGTGGATCCTGGGATTTCGCTTGTTATCAC
TGTGATCATTCTGCTCTCCGCCATTCCCCTATGCAAGGCTGCGTCCCGAA
TTCTCTTGCAGGCAGCGCCCCACGGCCTGAGCATCGACCATATCAAGGAG
GACATCGAAGGACTTCCAGGCGTCATCGGCTCCCACCACCTGCACGTATG
GCAGCTGAGCGACACCAAGTTAGTCGCCTCTATCCATATCCAAGTGGACA
CGGAGATCAAGGGCGAAGGCTCAGAACGCTATATGCGTCTGGCCAGGCAA
GTGAGGAAGTGCTTGCACGCTTATGGAATCCATTCGTCGACGATCCAGCC
GGAGTTTGCGCCTGACAGTGACACTGAGGACACAATTGCGGCCCCCTCGG
ACTGCCGTGGCGGCAGCAACGGAGCCTCCGCCTCGGGGACGCTTCCCAGT
CGAGCACCCAGTGTACCTGATGGTGATCCGCAGGCGTGCCTCCTGGAATG
TGGCGAGGAGTGTGCCAGGGGTGGCCAGTGTTGCCCCAAGCAATCGCCGT
GAATGGGTCTCTCCAAGACAAACAGGATCTTGATCCTGTTGGCGATTGAT
ACGGCATTTTTCTTGTTGGAATTGATTGCCGGTTATTCTGTTCACTCCCT
TGCCCTGGTTGCCGACTCGTTTCACATGCTGAATGATGTATTATCACTGT
GTGTGGGACTCTGGGCTGTCAAGGTCGCCAACCGCGAAACCAACTCGAAA
ATGTACACTTACGGGTGGCAACGCGCAGAAACTCTTGGTGCCTTAGTCAA
TGGCGTCTTCCTGGTCGCCCTGTGTCTATCGATTTTCCTGGAAGCTATAC
AAAGACTCGTTGAGCCTCAGGAAGTCAAAAACCCGAAATTCGTCTGCATC
GTCGGATGTCTCGGCTTGTTGTCAAACATAATTGGCCTTGTGCTGTTCCA
TGACCACTCCCACGGGCACGGCCACAGTCATGGCCCTGGAGATCTGGAAG
AAGGCGCAGATGTTGATCATGTGCACGCTGGGGAGCATGACCACGATCAT
GACCACTGGACCAGTATCTATCAAATCTATGAAGCTGACAACATGTGGAT
TAAGCAGACTGGTGGTGCCGAGCCACACTCTCCCTATTCGCGTCGCCGCC
GGACCCTCGATAGTCAACGTCGTCGCTACAGTGGATATGTTGACCCGGCA
GACATCCAGATTCACCCCGCTAGTATGAGACAGGAGATTATCGCAGCCAG
TAAAACCCGTTATGATGATGAACAATCCGGCTCGGACAGCGAGTTCCAAG
AGGGCGCCGATAGCCAGCCATCTGAGCGCTCAGCCCTCCTTGGTCAAGGC
GGTCGTACTGGTAAATATACCGACGAGACGGAGTCATCTGCCCGATCCCG
GACTGCGGCAGCTGATGAGGATCTCCACAAATTCCACAACCATGCTCAAC
CAAAGCCCAAAGACGAAAAGCATGGCCATGGCCATGGTCACGATCTCAAT
ATGCGGGGCGTTTTCCTTCATGTGATGGGCGATGCACTGGGCAACATCGG
CGTCATCGCTTCTGCTCTTATCATCTGGTTGACCGATTATTCTTGGAGAT
TCTACGTGGATCCTGGGATTTCGCTTGTTATCACTGTGATCATTCTGCTC
TCCGCCATTCCCCTATGCAAGGCTGCGTCCCGAATTCTCTTGCAGGCAGC
GCCCCACGGCCTGAGCATCGACCATATCAAGGAGGACATCGAAGGACTTC
CAGGCGTCATCGGCTCCCACCACCTGCACGTATGGCAGCTGAGCGACACC
AAGTTAGTCGCCTCTATCCATATCCAAGTGGACACGGAGATCAAGGGCGA
AGGCTCAGAACGCTATATGCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGC
ACGCTTATGGAATCCATTCGTCGACGATCCAGCCGGAGTTTGCGCCTGAC
AGTGACACTGAGGACACAATTGCGGCCCCCTCGGACTGCCGTGGCGGCAG
CAACGGAGCCTCCGCCTCGGGGACGCTTCCCAGTCGAGCACCCAGTGTAC
CTGATGGTGATCCGCAGGCGTGCCTCCTGGAATGTGGCGAGGAGTGTGCC
AGGGGTGGCCAGTGTTGCCCCAAGCAATCGCCGTGAATGGGTCTCTCCAA
GACAAACAGGATCTTGATCCTGTTGGCGATTGATACGGCATTTTTCTTGT
TGGAATTGATTGCCGGTTATTCTGTTCACTCCCTTGCCCTGGTTGCCGAC
TCGTTTCACATGCTGAATGATGTATTATCACTGTGTGTGGGACTCTGGGC
TGTCAAGGTCGCCAACCGCGAAACCAACTCGAAAATGTACACTTACGGGT
GGCAACGCGCAGAAACTCTTGGTGCCTTAGTCAATGGCGTCTTCCTGGTC
GCCCTGTGTCTATCGATTTTCCTGGAAGCTATACAAAGACTCGTTGAGCC
TCAGGAAGTCAAAAACCCGAAATTCGTCTGCATCGTCGGATGTCTCGGCT
TGTTGTCAAACATAATTGGCCTTGTGCTGTTCCATGACCACTCCCACGGG
CACGGCCACAGTCATGGCCCTGGAGATCTGGAAGAAGGCGCAGATGTTGA
TCATGTGCACGCTGGGGAGCATGACCACGATCATGACCACTGGACCAGTA
TCTATCAAATCTATGAAGCTGACAACATGTGGATTAAGCAGACTGGTGGT
GCCGAGCCACACTCTCCCTATTCGCGTCGCCGCCGGACCCTCGATAGTCA
ACGTCGTCGCTACAGTGGATATGTTGACCCGGCAGACATCCAGATTCACC
CCGCTAGTATGAGACAGGAGATTATCGCAGCCAGTAAAACCCGTTATGAT
GATGAACAATCCGGCTCGGACAGCGAGTTCCAAGAGGGCGCCGATAGCCA
GCCATCTGAGCGCTCAGCCCTCCTTGGTCAAGGCGGTCGTACTGGTAAAT
ATACCGACGAGACGGAGTCATCTGCCCGATCCCGGACTGCGGCAGCTGAT
GAGGATCTCCACAAATTCCACAACCATGCTCAACCAAAGCCCAAAGACGA
AAAGCATGGCCATGGCCATGGTCACGATCTCAATATGCGGGGCGTTTTCC
TTCATGTGATGGGCGATGCACTGGGCAACATCGGCGTCATCGCTTCTGCT
CTTATCATCTGGTTGACCGATTATTCTTGGAGATTCTACGTGGATCCTGG
GATTTCGCTTGTTATCACTGTGATCATTCTGCTCTCCGCCATTCCCCTAT
GCAAGGCTGCGTCCCGAATTCTCTTGCAGGCAGCGCCCCACGGCCTGAGC
ATCGACCATATCAAGGAGGACATCGAAGGACTTCCAGGCGTCATCGGCTC
CCACCACCTGCACGTATGGCAGCTGAGCGACACCAAGTTAGTCGCCTCTA
TCCATATCCAAGTGGACACGGAGATCAAGGGCGAAGGCTCAGAACGCTAT
ATGCGTCTGGCCAGGCAAGTGAGGAAGTGCTTGCACGCTTATGGAATCCA
TTCGTCGACGATCCAGCCGGAGTTTGCGCCTGACAGTGACACTGAGGACA
CAATTGCGGCCCCCTCGGACTGCCGTGGCGGCAGCAACGGAGCCTCCGCC
TCGGGGACGCTTCCCAGTCGAGCACCCAGTGTACCTGATGGTGATCCGCA
GGCGTGCCTCCTGGAATGTGGCGAGGAGTGTGCCAGGGGTGGCCAGTGTT
GCCCCAAGCAATCGCCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006812 | cation transport |
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008324 | cation transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036837 |
| DBxref | InterPro:IPR027469 |
| DBxref | InterPro:IPR002524 |
| DBxref | PFAM:PF01545 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:947934..949936 + |
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