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ASPNIDRAFT_53510-T1, ASPNIDRAFT_53510-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53510-T1
Unique NameASPNIDRAFT_53510-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1498391..1499583-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53510-T1 ID=ASPNIDRAFT_53510-T1|Name=ASPNIDRAFT_53510-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1193bp|location=Sequence derived from alignment at ACJE01000008.1:1498391..1499583- (Aspergillus niger ATCC 1015)
CATACATAACGACATCTTTTGGGTGGTTGAATGTTCAGCATCTGCCGTGT
TCTCGCCAATAGCAAAAGAGACCGTACATAACTGACTGAAAATCCAGATG
GCACCTTCTCTGGAGGAGCCGACCGCTGCCTACCTTGAGGCGCGGTCGAA
GATGGCCCCGAATCTGGTGGCTCCTGAGCCAGGTATGTCCGATATGAAGC
CGGGATATCTGCTTAGGATATGATTAGTGTACTAATCTCTGAGAAGAACA
TTGTCCTGGTCCCGAGTCCGAACAAGCAGGCAAAGGCGATGCCTGTGCAG
GGTGTCCCAATCAATCGATCTGCGCATCTGCCCCCAAAGGTCCTGACCCC
GATATCCCCATCATCACCGAACGGCTATCGCAAATACGACACAAAATCCT
TGTACTCTCTGGCAAAGGCGGTGTCGGAAAATCTACTTTCACCTCCCTTC
TCTCCCACGCATTCGCCGCAAATCCTGAATCGACTGTGGGTGTAATGGAT
ACCGATATCTGCGGGCCGTCGATACCGAAAATGATGGGCGTCGAGGCGGA
GACCATCCACGTGAGCAATGCAGGCTGGAGTCCGGTGTGGGTTACGGATA
ATTTAGCCACGATGAGCGTGCAATTCATGCTGCCCAATCGGGATGATGCG
GTGATCTGGAGAGGGCCGAAGAAGAACGGACTCATTAAACAATTCTTGAA
GGATGTGGATTGGGGCGAGATGGATTACTTGGTCATTGATACACCCCCGG
GGACATCGGACGAGCATCTGTCCGTCAACTCTCTGCTCAAGGAGTCCGGT
GTGGATGGCGCAGTAGTTGTCACTACCCCACAGGAGGTCTCGTTGCTCGA
CGTCAGGAAGGAAATAGACTTTTGCCGCAAGGCAGGCATTCGCATCCTGG
GGCTAGTCGAGAACATGTCTGGCTTCGTGTGCCAATCGTGCAACACTGAG
ACCCAGATCTTCCGGGCTACCACCGGGGGCGGAAAGCGACTCGCCAAGAA
GATGGGCATTCCTTTCCTGGGCGCTGTGCCTCTTGACCCGCGGGTAGGCA
TGGCATGTGACTATGGTGAGAGCTTCGTGGATCATTATCCCGACAGCCCA
GCATCGATTGCGATCAAGCAAGTTGTCCGCTCGGTTGCTGGGATGATTGG
AGAGGATCCCAACGACGTGCTGCCGGAGGATGCGGCAGAGTGA
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Coding sequence (CDS) from alignment at ACJE01000008.1:1498391..1499583-

>ASPNIDRAFT_53510-T1 ID=ASPNIDRAFT_53510-T1|Name=ASPNIDRAFT_53510-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2064bp|location=Sequence derived from alignment at ACJE01000008.1:1498391..1499583- (Aspergillus niger ATCC 1015)
AACATTGTCCTGGTCCCGAGTCCGAACAAGCAGGCAAAGGCGATGCCTGT
GCAGGGTGTCCCAATCAATCGATCTGCGCATCTGCCCCCAAAGGTCCTGA
CCCCGATATCCCCATCATCACCGAACGGCTATCGCAAATACGACACAAAA
TCCTTGTACTCTCTGGCAAAGGCGGTGTCGGAAAATCTACTTTCACCTCC
CTTCTCTCCCACGCATTCGCCGCAAATCCTGAATCGACTGTGGGTGTAAT
GGATACCGATATCTGCGGGCCGTCGATACCGAAAATGATGGGCGTCGAGG
CGGAGACCATCCACGTGAGCAATGCAGGCTGGAGTCCGGTGTGGGTTACG
GATAATTTAGCCACGATGAGCGTGCAATTCATGCTGCCCAATCGGGATGA
TGCGGTGATCTGGAGAGGGCCGAAGAAGAACGGACTCATTAAACAATTCT
TGAAGGATGTGGATTGGGGCGAGATGGATTACTTGGTCATTGATACACCC
CCGGGGACATCGGACGAGCATCTGTCCGTCAACTCTCTGCTCAAGGAGTC
CGGTGTGGATGGCGCAGTAGTTGTCACTACCCCACAGGAGGTCTCGTTGC
TCGACGTCAGGAAGGAAATAGACTTTTGCCGCAAGGCAGGCATTCGCATC
CTGGGGCTAGTCGAGAACATGTCTGGCTTCGTGTGCCAATCGTGCAACAC
TGAGACCCAGATCTTCCGGGCTACCACCGGGGGCGGAAAGCGACTCGCCA
AGAAGATGGGCATTCCTTTCCTGGGCGCTGTGCCTCTTGACCCGCGGGTA
GGCATGGCATGTGACTATGGTGAGAGCTTCGTGGATCATTATCCCGACAG
CCCAGCATCGATTGCGATCAAGCAAGTTGTCCGCTCGGTTGCTGGGATGA
TTGGAGAGGATCCCAACGACGTGCTGCCGGAGGATGCGGCAGAGTGAATG
GCACCTTCTCTGGAGGAGCCGACCGCTGCCTACCTTGAGGCGCGGTCGAA
GATGGCCCCGAATCTGGTGGCTCCTGAGCCAGAACATTGTCCTGGTCCCG
AGTCCGAACAAGCAGGCAAAGGCGATGCCTGTGCAGGGTGTCCCAATCAA
TCGATCTGCGCATCTGCCCCCAAAGGTCCTGACCCCGATATCCCCATCAT
CACCGAACGGCTATCGCAAATACGACACAAAATCCTTGTACTCTCTGGCA
AAGGCGGTGTCGGAAAATCTACTTTCACCTCCCTTCTCTCCCACGCATTC
GCCGCAAATCCTGAATCGACTGTGGGTGTAATGGATACCGATATCTGCGG
GCCGTCGATACCGAAAATGATGGGCGTCGAGGCGGAGACCATCCACGTGA
GCAATGCAGGCTGGAGTCCGGTGTGGGTTACGGATAATTTAGCCACGATG
AGCGTGCAATTCATGCTGCCCAATCGGGATGATGCGGTGATCTGGAGAGG
GCCGAAGAAGAACGGACTCATTAAACAATTCTTGAAGGATGTGGATTGGG
GCGAGATGGATTACTTGGTCATTGATACACCCCCGGGGACATCGGACGAG
CATCTGTCCGTCAACTCTCTGCTCAAGGAGTCCGGTGTGGATGGCGCAGT
AGTTGTCACTACCCCACAGGAGGTCTCGTTGCTCGACGTCAGGAAGGAAA
TAGACTTTTGCCGCAAGGCAGGCATTCGCATCCTGGGGCTAGTCGAGAAC
ATGTCTGGCTTCGTGTGCCAATCGTGCAACACTGAGACCCAGATCTTCCG
GGCTACCACCGGGGGCGGAAAGCGACTCGCCAAGAAGATGGGCATTCCTT
TCCTGGGCGCTGTGCCTCTTGACCCGCGGGTAGGCATGGCATGTGACTAT
GGTGAGAGCTTCGTGGATCATTATCCCGACAGCCCAGCATCGATTGCGAT
CAAGCAAGTTGTCCGCTCGGTTGCTGGGATGATTGGAGAGGATCCCAACG
ACGTGCTGCCGGAGGATGCGGCAGAGTGAATGGCACCTTCTCTGGAGGAG
CCGACCGCTGCCTACCTTGAGGCGCGGTCGAAGATGGCCCCGAATCTGGT
GGCTCCTGAGCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016612molybdenum-iron nitrogenase complex
Vocabulary: Biological Process
TermDefinition
GO:0009399nitrogen fixation
GO:0055114oxidation-reduction process
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0016163nitrogenase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NBP35ASPNIDRAFT_53510Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53510-T1ASPNIDRAFT_53510-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53510-T1.cdsASPNIDRAFT_53510-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53510-T1.exon2ASPNIDRAFT_53510-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53510-T1.exon1ASPNIDRAFT_53510-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53510-T1.utr5p1ASPNIDRAFT_53510-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005977
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR028601
DBxrefInterPro:IPR000808
DBxrefInterPro:IPR033756
DBxrefPFAM:PF10609
DBxrefPFAM:PF01656
Productcytosolic Fe-S cluster assembly factor nbp35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1498391..1499583 -
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