You are here

Home

ASPNIDRAFT_53547-T1, ASPNIDRAFT_53547-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53547-T1
Unique NameASPNIDRAFT_53547-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1878265..1879269+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53547-T1 ID=ASPNIDRAFT_53547-T1|Name=ASPNIDRAFT_53547-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1005bp|location=Sequence derived from alignment at ACJE01000008.1:1878265..1879269+ (Aspergillus niger ATCC 1015)
ACCAGTCCTTCTTGTAATCCGTGTTTTGTTTTGTGCTTCCTCTGAGAGCC
GTTGTTCTGCCACTCTTTTCAGAGCAACGCGATTCTCGTTCACTCGTTCA
TCTCATTCGTCGCGTCGCCCTAAACAACTTGTTTTAGTTGCACATTACGT
TAAGGGATTTTGCCCCAGTCGCTCATTTCCATCCACCATGAATCGCTCAC
TTTTCTCCATTTTCATCGCTGTCTGCGTCTATGCGCATTGTGTGTTTGCC
TCTTTAACTTCGAGCGAGATTGCCAACTCCTTGAATGAATTGGCGCAACA
AGGTTTCGCTGCCAAGGATCTCGTATTGGAGATTAACTCCACCGCCGATG
CCGGTCCAATGCGTGTAGGTGACCCTGGGTATCATGCGATACAATAATCA
TACACAACTTTAAGAATGTGTAACCCTGATAAGATGTAGGACGTCTATAC
AGAAATGGATACAATGGTCACCGTGGTTCTTACAGATGTTGAGTTCATGA
CCAATACTCCCATCATCACCGATCAAGCCGAGGAGCAGACCGTATATGAA
GGGTATTCGAATGTGAGGTCATCGGCCTAATTCATAGTACCAGCGAAATA
TGTAACTTATCTCATTGGCTGCTAGTTCGTACAATCGCTCCTCGAGCTCA
TGGACGCCTTCTCCAGCAGCGCAACCGAGTTGAAGTCGATTGACTCAACC
ACCAAGGATAAAGTCCCTTCGGAAGTCCGCATCCTGGAGAGTGCCGTGGA
CGTGAGTTGTTCTTCTATTTTGAACGGCTGAGATTCACACTAATATCATA
TCAGGCCTATTTCTATAATATTATCGGCCTCTTCCCGGCCAACAGCTCGT
ACAATGCCCAAGCCAGTAACCAGAAAGCCCAGGTGGACACGCATTGCTTC
CAGGCTATCTGGGCATTTGATCTCAGTGATGGCAGTCAGTCTACCACTCA
ATCACGCAGGAACACCTCTCTTCATTCTCGACGCATGATGCGAAACTCTG
CTTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1878265..1879269+

>ASPNIDRAFT_53547-T1 ID=ASPNIDRAFT_53547-T1|Name=ASPNIDRAFT_53547-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2508bp|location=Sequence derived from alignment at ACJE01000008.1:1878265..1879269+ (Aspergillus niger ATCC 1015)
ATGAATCGCTCACTTTTCTCCATTTTCATCGCTGTCTGCGTCTATGCGCA
TTGTGTGTTTGCCTCTTTAACTTCGAGCGAGATTGCCAACTCCTTGAATG
AATTGGCGCAACAAGGTTTCGCTGCCAAGGATCTCGTATTGGAGATTAAC
TCCACCGCCGATGCCGGTCCAATGCGTGACGTCTATACAGAAATGGATAC
AATGGTCACCGTGGTTCTTACAGATGTTGAGTTCATGACCAATACTCCCA
TCATCACCGATCAAGCCGAGGAGCAGACCGTATATGAAGGGTATTCGAAT
TTCGTACAATCGCTCCTCGAGCTCATGGACGCCTTCTCCAGCAGCGCAAC
CGAGTTGAAGTCGATTGACTCAACCACCAAGGATAAAGTCCCTTCGGAAG
TCCGCATCCTGGAGAGTGCCGTGGACGCCTATTTCTATAATATTATCGGC
CTCTTCCCGGCCAACAGCTCGTACAATGCCCAAGCCAGTAACCAGAAAGC
CCAGGTGGACACGCATTGCTTCCAGGCTATCTGGGCATTTGATCTCAGTG
ATGGCAGTCAGTCTACCACTCAATCACGCAGGAACACCTCTCTTCATTCT
CGACGCATGATGCGAAACTCTGCTTAGATGAATCGCTCACTTTTCTCCAT
TTTCATCGCTGTCTGCGTCTATGCGCATTGTGTGTTTGCCTCTTTAACTT
CGAGCGAGATTGCCAACTCCTTGAATGAATTGGCGCAACAAGGTTTCGCT
GCCAAGGATCTCGTATTGGAGATTAACTCCACCGCCGATGCCGGTCCAAT
GCGTGACGTCTATACAGAAATGGATACAATGGTCACCGTGGTTCTTACAG
ATGTTGAGTTCATGACCAATACTCCCATCATCACCGATCAAGCCGAGGAG
CAGACCGTATATGAAGGGTATTCGAATTTCGTACAATCGCTCCTCGAGCT
CATGGACGCCTTCTCCAGCAGCGCAACCGAGTTGAAGTCGATTGACTCAA
CCACCAAGGATAAAGTCCCTTCGGAAGTCCGCATCCTGGAGAGTGCCGTG
GACGCCTATTTCTATAATATTATCGGCCTCTTCCCGGCCAACAGCTCGTA
CAATGCCCAAGCCAGTAACCAGAAAGCCCAGGTGGACACGCATTGCTTCC
AGGCTATCTGGGCATTTGATCTCAGTGATGGCAGTCAGTCTACCACTCAA
TCACGCAGGAACACCTCTCTTCATTCTCGACGCATGATGCGAAACTCTGC
TTAGATGAATCGCTCACTTTTCTCCATTTTCATCGCTGTCTGCGTCTATG
CGCATTGTGTGTTTGCCTCTTTAACTTCGAGCGAGATTGCCAACTCCTTG
AATGAATTGGCGCAACAAGGTTTCGCTGCCAAGGATCTCGTATTGGAGAT
TAACTCCACCGCCGATGCCGGTCCAATGCGTGACGTCTATACAGAAATGG
ATACAATGGTCACCGTGGTTCTTACAGATGTTGAGTTCATGACCAATACT
CCCATCATCACCGATCAAGCCGAGGAGCAGACCGTATATGAAGGGTATTC
GAATTTCGTACAATCGCTCCTCGAGCTCATGGACGCCTTCTCCAGCAGCG
CAACCGAGTTGAAGTCGATTGACTCAACCACCAAGGATAAAGTCCCTTCG
GAAGTCCGCATCCTGGAGAGTGCCGTGGACGCCTATTTCTATAATATTAT
CGGCCTCTTCCCGGCCAACAGCTCGTACAATGCCCAAGCCAGTAACCAGA
AAGCCCAGGTGGACACGCATTGCTTCCAGGCTATCTGGGCATTTGATCTC
AGTGATGGCAGTCAGTCTACCACTCAATCACGCAGGAACACCTCTCTTCA
TTCTCGACGCATGATGCGAAACTCTGCTTAGATGAATCGCTCACTTTTCT
CCATTTTCATCGCTGTCTGCGTCTATGCGCATTGTGTGTTTGCCTCTTTA
ACTTCGAGCGAGATTGCCAACTCCTTGAATGAATTGGCGCAACAAGGTTT
CGCTGCCAAGGATCTCGTATTGGAGATTAACTCCACCGCCGATGCCGGTC
CAATGCGTGACGTCTATACAGAAATGGATACAATGGTCACCGTGGTTCTT
ACAGATGTTGAGTTCATGACCAATACTCCCATCATCACCGATCAAGCCGA
GGAGCAGACCGTATATGAAGGGTATTCGAATTTCGTACAATCGCTCCTCG
AGCTCATGGACGCCTTCTCCAGCAGCGCAACCGAGTTGAAGTCGATTGAC
TCAACCACCAAGGATAAAGTCCCTTCGGAAGTCCGCATCCTGGAGAGTGC
CGTGGACGCCTATTTCTATAATATTATCGGCCTCTTCCCGGCCAACAGCT
CGTACAATGCCCAAGCCAGTAACCAGAAAGCCCAGGTGGACACGCATTGC
TTCCAGGCTATCTGGGCATTTGATCTCAGTGATGGCAGTCAGTCTACCAC
TCAATCACGCAGGAACACCTCTCTTCATTCTCGACGCATGATGCGAAACT
CTGCTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53547ASPNIDRAFT_53547Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53547-T1ASPNIDRAFT_53547-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53547-T1.utr5p1ASPNIDRAFT_53547-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53547-T1.exon1ASPNIDRAFT_53547-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53547-T1.exon2ASPNIDRAFT_53547-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53547-T1.exon3ASPNIDRAFT_53547-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53547-T1.exon4ASPNIDRAFT_53547-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53547-T1.cdsASPNIDRAFT_53547-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-21)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1878265..1879269 +
Powered by Drupal