You are here

Home

ASPNIDRAFT_200072-T1, ASPNIDRAFT_200072-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200072-T1
Unique NameASPNIDRAFT_200072-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1391468..1393026-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200072-T1 ID=ASPNIDRAFT_200072-T1|Name=ASPNIDRAFT_200072-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1559bp|location=Sequence derived from alignment at ACJE01000009.1:1391468..1393026- (Aspergillus niger ATCC 1015)
ATGGACCACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGA
CCCCTCCAACAACAATAACAATCGTCACGCGACTCGCCCTGCTCACCACC
ACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGT
GATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAA
CTACAATAATGCGCCTGTTAGTCGGAAGCGCCGGTACCGCGGCACGTGGT
GGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTC
AAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTA
TGACTCTGGTCCGGGGTCGGGGTTCTTGCCTTCTGATGCGGATTTGGGAG
AGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCG
CAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCG
CGAGCATCAAGTCGCACGGGGAATCGTGAATGATTGTCTCGAGAGGGGGG
AGGATAGTGTTGATTTGAGGTAATCCCCTACATTTCTTCGCCCATCATCC
AGAAACAACCTTAACCTATATCCATGTCTAGCGGCCTCACCCTCCGCCTC
ATACCCCCAAACCTCCTCCTCCCCCTCCAACACCTCACCAAACTCCCAAC
CATCAGGGAGCCCCCCATCAGCGAAGACGTCTACACCTCCCTCCAACCAT
TCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCCAAGTCCCCGGCGAG
ATCTTCGACCTCGACTCCCTCCGCGTCCTCAGTCTCCGCTACAACAAACT
TACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCTCCTCCAGGAACTAA
ACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGGAACTCCTCTTCCTC
ATCCGCAAAGGCGACCTCAAACACCTTACCGTTCGCCCGAACCCCCTCCT
CCAAATCGAAGACCAGCCCATCGCCCAATGGCACGTTCCAACCGACCAAG
AGACCCAAGAACCACAACTGAAATCAGTAACATATGACGGCCCACCTCCG
GAGGAAGCATGGGCACCTGTACACGTCGCTACCGGCCCAGTTACATACTA
CAACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCCTACTGAACAAACCA
ACCACCAAACAATAAACACCAGCAGCAGCAGCAGCATCTCCCGCGTCCCC
TCCCTCCGCGAAATCTCCCTCCTAGCATTCACCCGCTCGACATACCCGGA
CCTGATCACAGACGAAGAAATGGAGGATTTCCCGGCCCTGATGACCCGCT
TACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGGGCAGGAACTGCTCG
TCATGTCACCGGGGCTTTGTGCTCGCGCGGACAGAGTGGATCGAGTGGTG
GGATGTCAGTACGTATGAGAATGGGTTGAAGGGACCTAGGGCATCTGGGG
AAGTGTTGAGGCCGTTGCCGTTTAGGAGAGTTGGGTGTAGTTGGGGATGT
GTGCCTGAG
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:1391468..1393026-

>ASPNIDRAFT_200072-T1 ID=ASPNIDRAFT_200072-T1|Name=ASPNIDRAFT_200072-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2990bp|location=Sequence derived from alignment at ACJE01000009.1:1391468..1393026- (Aspergillus niger ATCC 1015)
CGGCCTCACCCTCCGCCTCATACCCCCAAACCTCCTCCTCCCCCTCCAAC
ACCTCACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTC
TACACCTCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCT
AACCCAAGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCGTCCTCA
GTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTC
ACCCTCCTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCC
ATGGGAACTCCTCTTCCTCATCCGCAAAGGCGACCTCAAACACCTTACCG
TTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGG
CACGTTCCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAAC
ATATGACGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACGTCGCTA
CCGGCCCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAA
ATCCCTACTGAACAAACCAACCACCAAACAATAAACACCAGCAGCAGCAG
CAGCATCTCCCGCGTCCCCTCCCTCCGCGAAATCTCCCTCCTAGCATTCA
CCCGCTCGACATACCCGGACCTGATCACAGACGAAGAAATGGAGGATTTC
CCGGCCCTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCGTAGCGC
GGGGGGCAGGAACTGCTCGTCATGTCACCGGGGCTTTGTGCTCGCGCGGA
CAGAGTGGATCGAGTGGTGGGATGTCAGTACGTATGAGAATGGGTTGAAG
GGACCTAGGGCATCTGGGGAAGTGTTGAGGCCGTTGCCGTTTAGGAGAGT
TGGGTGTAGTTGGGGATGTGTGCCTGATGGACCACGAAATCCCACTCCCC
CCACCACCGCGCATCCGCCATCGCGACCCCTCCAACAACAATAACAATCG
TCACGCGACTCGCCCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATTG
ACGACCGCTCCAGTCAACCTTCCAGTGATCCAGCGCTTTTCTCCAGTGAC
GATATCCCCGCCTCAGGACTAGAGAACTACAATAATGCGCCTGTTAGTCG
GAAGCGCCGGTACCGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAGG
ACGCGAAGCGCAAACGGGCGGATTTCAAGGAGAAGCGCTTGGTGGATAGT
GGTGTGTGGATGGGAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGTT
CTTGCCTTCTGATGCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCGA
ATGGAGGTTCAAAGACGGTGACACCGCAGACTCAAAGTCAACAACAAGGA
TTCAGAAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAAT
CGTGAATGATTGTCTCGAGAGGGGGGAGGATAGTGTTGATTTGAGCGGCC
TCACCCTCCGCCTCATACCCCCAAACCTCCTCCTCCCCCTCCAACACCTC
ACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTCTACAC
CTCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCC
AAGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCGTCCTCAGTCTC
CGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCT
CCTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGG
AACTCCTCTTCCTCATCCGCAAAGGCGACCTCAAACACCTTACCGTTCGC
CCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGGCACGT
TCCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAACATATG
ACGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACGTCGCTACCGGC
CCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCC
TACTGAACAAACCAACCACCAAACAATAAACACCAGCAGCAGCAGCAGCA
TCTCCCGCGTCCCCTCCCTCCGCGAAATCTCCCTCCTAGCATTCACCCGC
TCGACATACCCGGACCTGATCACAGACGAAGAAATGGAGGATTTCCCGGC
CCTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGG
GCAGGAACTGCTCGTCATGTCACCGGGGCTTTGTGCTCGCGCGGACAGAG
TGGATCGAGTGGTGGGATGTCAGTACGTATGAGAATGGGTTGAAGGGACC
TAGGGCATCTGGGGAAGTGTTGAGGCCGTTGCCGTTTAGGAGAGTTGGGT
GTAGTTGGGGATGTGTGCCTGATGGACCACGAAATCCCACTCCCCCCACC
ACCGCGCATCCGCCATCGCGACCCCTCCAACAACAATAACAATCGTCACG
CGACTCGCCCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATTGACGAC
CGCTCCAGTCAACCTTCCAGTGATCCAGCGCTTTTCTCCAGTGACGATAT
CCCCGCCTCAGGACTAGAGAACTACAATAATGCGCCTGTTAGTCGGAAGC
GCCGGTACCGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAGGACGCG
AAGCGCAAACGGGCGGATTTCAAGGAGAAGCGCTTGGTGGATAGTGGTGT
GTGGATGGGAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGTTCTTGC
CTTCTGATGCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCGAATGGA
GGTTCAAAGACGGTGACACCGCAGACTCAAAGTCAACAACAAGGATTCAG
AAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAATCGTGA
ATGATTGTCTCGAGAGGGGGGAGGATAGTGTTGATTTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200072ASPNIDRAFT_200072Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200072-T1ASPNIDRAFT_200072-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200072-T1.cdsASPNIDRAFT_200072-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200072-T1.utr3p1ASPNIDRAFT_200072-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200072-T1.exon2ASPNIDRAFT_200072-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200072-T1.exon1ASPNIDRAFT_200072-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR003591
DBxrefPFAM:PF13855
DBxrefPFAM:PF12799
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1391468..1393026 -
Powered by Drupal