You are here

Home

ASPNIDRAFT_126931-T1, ASPNIDRAFT_126931-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_126931-T1
Unique NameASPNIDRAFT_126931-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1855011..1855862-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_126931-T1 ID=ASPNIDRAFT_126931-T1|Name=ASPNIDRAFT_126931-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=852bp|location=Sequence derived from alignment at ACJE01000009.1:1855011..1855862- (Aspergillus niger ATCC 1015)
CTCCACCTCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCT
CCTCGAAGAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAA
TCGACCTCGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAAT
CCCAACGGTAAGCCATAATTCATCCCCTCTTCTTTCTTTTTTCCTTGTGA
CCTACCTAGAACAAGTATGTAGATAAATACTGAACAAACAAACCCATACA
GGAAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCC
AATCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTT
ACGACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAG
CTCCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGC
GGGGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTGTAAGC
ACACACACCCTATTTCAGTTCTTGTGGTTCTATAGGAGATATCTAATTTA
CTTATTGCTTTTGGGGAATAGACGCTGTTGAGAGATTTAAGGCTGAGACG
CTTCGGATTTACAGCGTGCTGGAATTGCATTTGTCCAATGGTTTGGCTGG
TGGTGGTGGTGGTGGTGGTGATGAGACTAGGGAGTACTTGGTGGGCGAGG
GACGAGGGAAATACAGCATCGCGGATATTAATGCGTATGCGTGGGTGCGG
GCGTGGAAGAGAATGACGATCACGGAGGAGGAGATGGATGGGTTTCCGCT
GCTGAGGAAGTGGATTGAGCGGATTGGGGAGAGGCCGGCGGTGGTGAGGG
GG
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:1855011..1855862-

>ASPNIDRAFT_126931-T1 ID=ASPNIDRAFT_126931-T1|Name=ASPNIDRAFT_126931-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2025bp|location=Sequence derived from alignment at ACJE01000009.1:1855011..1855862- (Aspergillus niger ATCC 1015)
ACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGCTG
GAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGTGA
TGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCATCG
CGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGATC
ACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAGCG
GATTGGGGAGAGGCCGGCGGTGGTGGAAAAATCCCCCTCCTCATCGACAA
CAACTCATCCAGCAACTCAGACCCAATCCCAGTCATGGAATCAGCCGCCG
AACTCCTCTACCTCGTAGAAACTTACGACCCGGATCACCATTTCCACTTC
TCGTCGGCAATCCACCGATCCCAGCTCCTCCAGTGGTTGATCTTCTGGTC
TGCGTCGGGTCAGCCGCAGCAGGCGGGGTTGAATCATTTTGCTCGGTTCG
CGGCGGTGGAGGTTCCTTCTCCACCTCCTAACAACCTCCACCCCCAACGG
CAAAAAAGTCCAAATCCTCCTCGAAGAACTCAAAGACATCTACGGATTAC
GATGGACAACATCCCTAATCGACCTCGACACCGACGAGCAGAAGCAGCCA
TGGTTTCTGGCGTTTAATCCCAACGACGCTGTTGAGAGATTTAAGGCTGA
GACGCTTCGGATTTACAGCGTGCTGGAATTGCATTTGTCCAATGGTTTGG
CTGGTGGTGGTGGTGGTGGTGGTGATGAGACTAGGGAGTACTTGGTGGGC
GAGGGACGAGGGAAATACAGCATCGCGGATATTAATGCGTATGCGTGGGT
GCGGGCGTGGAAGAGAATGACGATCACGGAGGAGGAGATGGATGGGTTTC
CGCTGCTGAGGAAGTGGATTGAGCGGATTGGGGAGAGGCCGGCGGTGGTG
GAAAAATCCCCCTCCTCATCGACAACAACTCATCCAGCAACTCAGACCCA
ATCCCAGTCATGGAATCAGCCGCCGAACTCCTCTACCTCGTAGAAACTTA
CGACCCGGATCACCATTTCCACTTCTCGTCGGCAATCCACCGATCCCAGC
TCCTCCAGTGGTTGATCTTCTGGTCTGCGTCGGGTCAGCCGCAGCAGGCG
GGGTTGAATCATTTTGCTCGGTTCGCGGCGGTGGAGGTTCCTTCTCCACC
TCCTAACAACCTCCACCCCCAACGGCAAAAAAGTCCAAATCCTCCTCGAA
GAACTCAAAGACATCTACGGATTACGATGGACAACATCCCTAATCGACCT
CGACACCGACGAGCAGAAGCAGCCATGGTTTCTGGCGTTTAATCCCAACG
ACGCTGTTGAGAGATTTAAGGCTGAGACGCTTCGGATTTACAGCGTGCTG
GAATTGCATTTGTCCAATGGTTTGGCTGGTGGTGGTGGTGGTGGTGGTGA
TGAGACTAGGGAGTACTTGGTGGGCGAGGGACGAGGGAAATACAGCATCG
CGGATATTAATGCGTATGCGTGGGTGCGGGCGTGGAAGAGAATGACGATC
ACGGAGGAGGAGATGGATGGGTTTCCGCTGCTGAGGAAGTGGATTGAGCG
GATTGGGGAGAGGCCGGCGGTGGTGGAAAAATCCCCCTCCTCATCGACAA
CAACTCATCCAGCAACTCAGACCCAATCCCAGTCATGGAATCAGCCGCCG
AACTCCTCTACCTCGTAGAAACTTACGACCCGGATCACCATTTCCACTTC
TCGTCGGCAATCCACCGATCCCAGCTCCTCCAGTGGTTGATCTTCTGGTC
TGCGTCGGGTCAGCCGCAGCAGGCGGGGTTGAATCATTTTGCTCGGTTCG
CGGCGGTGGAGGTTCCTTCTCCACCTCCTAACAACCTCCACCCCCAACGG
CAAAAAAGTCCAAATCCTCCTCGAAGAACTCAAAGACATCTACGGATTAC
GATGGACAACATCCCTAATCGACCTCGACACCGACGAGCAGAAGCAGCCA
TGGTTTCTGGCGTTTAATCCCAACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126931ASPNIDRAFT_126931Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126931-T1ASPNIDRAFT_126931-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126931-T1.cdsASPNIDRAFT_126931-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126931-T1.utr3p1ASPNIDRAFT_126931-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126931-T1.exon3ASPNIDRAFT_126931-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126931-T1.exon2ASPNIDRAFT_126931-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126931-T1.exon1ASPNIDRAFT_126931-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1855011..1855862 -
Powered by Drupal