You are here

Home

ASPNIDRAFT_173584-T1, ASPNIDRAFT_173584-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_173584-T1
Unique NameASPNIDRAFT_173584-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:356593..358283+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_173584-T1 ID=ASPNIDRAFT_173584-T1|Name=ASPNIDRAFT_173584-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1691bp|location=Sequence derived from alignment at ACJE01000010.1:356593..358283+ (Aspergillus niger ATCC 1015)
ATGCAGAGGAATGCATTGTTCCTAGCCGCAAGAAGTGGCAGAGCAAATGT
GGTCAAGTTGCTGCTCCATTCCGGGCTGATAAACCCCAATGTCCCTGACT
CTCATGGCATCTCACCCCTGTTAGCAGCCATCCAGGAAGGCCACGAAAAA
GTCGTCCGCCTTCTTCTCCAGATCAGCGAAGTCAAATTGAATGACACCGG
ACGCACAGGCAACATCCCAACACCACTGGTGGCCGCTGCTAGTCAGGGCG
AAGCCCGTATTGTCCGAATGCTCTTGAAGCGCCCCGACATCGACATCAAT
CGCTCTACGTACGGGACTTCTCCAATATTCGCAGCAGCAGGCAACGGACA
CGCAGATATAGTGAGCTTATTGCAATGCAGACCTGACATCTCCCTTTTCA
CCCCCGACCAGTCTCGATACCTCCTTAACTCAGCCGTTTCCCACGGACAG
ACAGACATCGTGAGAACACTGCTAAACAACAGCCATCACATCGATCCACA
CATCCCAGACAGCGACGGCCGAGCATCCCTTCACATAGCAGTCATCAAGA
ACCGCATAGAGATTCTGCGCCTCCTCCTCGCCTACAGCACCACAGACCCC
AATCTCACAGACAAGCAAGGCAGCACGCCTCTCATGCTCGCCACACTCCA
CAACAACCATGAAATCATCCACCTGCTCATACAAAACAATCGAACCCGCT
ACGACACCAGCGACATCAGCGGCACGACACTCCTAATGCATGCCATCATC
AAGAACAACGAAACCGTCTTCCACGCCGCCCTCAACCACACCACAGACTA
TCACCTCAACGCGCAAAACAAAACCGGCTCATCAGCCCTCCACATCGCCT
GCATCACCGACACTACCTTCGCCCTCGAAGCTCTCCTCTCCTCCACTACC
ACCATAAACCCCAACCTCCAAAACACCCAAGGCCTCACACCCCTCCACTG
CGCCATCCTCCACAAAGCCACCCAAGCCATCATCTGGCTCCTCCAAACCC
CAACCATCTCTCCCCAACTCCCAGACCGCAAAGGAACAACCCCACTATGT
CTGGCAATCGAGCAAAACAACCTCATCGCCACAGACCTTCTCCTCTCCCA
TCCCCTCGTGGACATAAACCACCCCTCTTCTTTTTCTTCTCAGATCCATG
AACCCGAATACACACCCCTAATCCTCACCACCATAACCAACAACCTCCCC
CTAACCCTCCTCCTCCTCGGCCACCCAACCATCAACCCAAATCTCCCGGA
CAGCAACGGCGACACGCCGCTCGCCCACGCCGCCAAACACGGTCATCTAG
CCATAGCAGAGGCCCTCCTCGCGCACCCAGCCACAAACCCGCACTTGGGA
GCTCAAATAGGAGGGATAGTAGGTACACCGCCCCTCGTCCACGCGGCGGA
GAACAACCACCTGGATATGGTGCAACTTCTTCTGCAAAGCGGACGGGTAT
ACCCCGATGCGCCGGACAGGTACCTCCGCACGCCACTGGTCGCTGCTGCG
GAGAAGGGGCATACGGGGGTAGTGAGGGAGTTGTTCCGGCTTGGTGGAGG
GGATGTGGATGTTGAGCATATGGATATGAGGAGAATGACGGCGCTGAGAG
TGGCAGCGAGGAATGGGCATGAGGGGGTGGTGAGGTTCTTGGTTGTGGAA
ATTGGGGTGAGGGTGGATTTGGGGAGGAGGTCTGGGGTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:356593..358283+

>ASPNIDRAFT_173584-T1 ID=ASPNIDRAFT_173584-T1|Name=ASPNIDRAFT_173584-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1692bp|location=Sequence derived from alignment at ACJE01000010.1:356593..358283+ (Aspergillus niger ATCC 1015)
ATGCAGAGGAATGCATTGTTCCTAGCCGCAAGAAGTGGCAGAGCAAATGT
GGTCAAGTTGCTGCTCCATTCCGGGCTGATAAACCCCAATGTCCCTGACT
CTCATGGCATCTCACCCCTGTTAGCAGCCATCCAGGAAGGCCACGAAAAA
GTCGTCCGCCTTCTTCTCCAGATCAGCGAAGTCAAATTGAATGACACCGG
ACGCACAGGCAACATCCCAACACCACTGGTGGCCGCTGCTAGTCAGGGCG
AAGCCCGTATTGTCCGAATGCTCTTGAAGCGCCCCGACATCGACATCAAT
CGCTCTACGTACGGGACTTCTCCAATATTCGCAGCAGCAGGCAACGGACA
CGCAGATATAGTGAGCTTATTGCAATGCAGACCTGACATCTCCCTTTTCA
CCCCCGACCACAACGGCGACACGCCGCTCGCCCACGCCGCCAAACACGGT
CATCTAGCCATAGCAGAGGCCCTCCTCGCGCACCCAGCCACAAACCCGCA
CTTGGGAGCTCAAATAGGAGGGATAGTAGGTACACCGCCCCTCGTCCACG
CGGCGGAGAACAACCACCTGGATATGGTGCAACTTCTTCTGCAAAGCGGA
CGGGTATACCCCGATGCGCCGGACAGGTACCTCCGCACGCCACTGGTCGC
TGCTGCGGAGAAGGGGCATACGGGGGTAGTGAGGGAGTTGTTCCGGCTTG
GTGGAGGGGATGTGGATGTTGAGCATATGGATATGAGGAGAATGACGGCG
CTGAGAGTGGCAGCGAGGAATGGGCATGAGGGGGTGGTGAGGTTCTTGGT
TGTGGAAATTGGGGTGAGGGTGGATTTGGGGAGGAGGTCTGGGGTTATGC
AGAGGAATGCATTGTTCCTAGCCGCAAGAAGTGGCAGAGCAAATGTGGTC
AAGTTGCTGCTCCATTCCGGGCTGATAAACCCCAATGTCCCTGACTCTCA
TGGCATCTCACCCCTGTTAGCAGCCATCCAGGAAGGCCACGAAAAAGTCG
TCCGCCTTCTTCTCCAGATCAGCGAAGTCAAATTGAATGACACCGGACGC
ACAGGCAACATCCCAACACCACTGGTGGCCGCTGCTAGTCAGGGCGAAGC
CCGTATTGTCCGAATGCTCTTGAAGCGCCCCGACATCGACATCAATCGCT
CTACGTACGGGACTTCTCCAATATTCGCAGCAGCAGGCAACGGACACGCA
GATATAGTGAGCTTATTGCAATGCAGACCTGACATCTCCCTTTTCACCCC
CGACCACAACGGCGACACGCCGCTCGCCCACGCCGCCAAACACGGTCATC
TAGCCATAGCAGAGGCCCTCCTCGCGCACCCAGCCACAAACCCGCACTTG
GGAGCTCAAATAGGAGGGATAGTAGGTACACCGCCCCTCGTCCACGCGGC
GGAGAACAACCACCTGGATATGGTGCAACTTCTTCTGCAAAGCGGACGGG
TATACCCCGATGCGCCGGACAGGTACCTCCGCACGCCACTGGTCGCTGCT
GCGGAGAAGGGGCATACGGGGGTAGTGAGGGAGTTGTTCCGGCTTGGTGG
AGGGGATGTGGATGTTGAGCATATGGATATGAGGAGAATGACGGCGCTGA
GAGTGGCAGCGAGGAATGGGCATGAGGGGGTGGTGAGGTTCTTGGTTGTG
GAAATTGGGGTGAGGGTGGATTTGGGGAGGAGGTCTGGGGTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173584ASPNIDRAFT_173584Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173584-T1.exon1ASPNIDRAFT_173584-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173584-T1.exon2ASPNIDRAFT_173584-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173584-T1.cdsASPNIDRAFT_173584-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173584-T1.utr3p1ASPNIDRAFT_173584-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173584-T1ASPNIDRAFT_173584-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:356593..358283 +
Powered by Drupal