You are here

Home

ASPNIDRAFT_173507-T1, ASPNIDRAFT_173507-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_173507-T1
Unique NameASPNIDRAFT_173507-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:691561..693147-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_173507-T1 ID=ASPNIDRAFT_173507-T1|Name=ASPNIDRAFT_173507-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1587bp|location=Sequence derived from alignment at ACJE01000010.1:691561..693147- (Aspergillus niger ATCC 1015)
ATGCGCAGTCACCACATAACCGCCTTCCTGCTGCTCCTGTTACACAGTCA
ACGGGCATATTCCGACCTGGGTATACAAGTCAACGATGCCAGTATGCCAT
TACCTACACCAATCCCTCAACTACATGTCCATCTCTAATCATCATGTCAA
CAGACTCCCTCGCAAACGCCGGCTCCACCATCGCCGATCCCTTGATGGAA
TTCTACAAACAGAACCAAACCGAAGGCATCCCCGGCAAGCTCACCGACAC
CTGGTACATTGCGGGGGCCATGTTCATGACCCTGATCCAATTCTGGAAGG
CCTCAGGCGTCGACACCTACAATTCCGTCGTGCAGCATGACCTGATGTTC
CAAGCCGGCGAGAACTACGACTACTTCTCCTCCAACTACAGTCAATGGCT
GGTACATACCCTCCCCCCTCCAACCTCACCCGATTCCTACCTAGCAGTTC
GACTAATGATATACCCCTCCAGGGCAACGACGACCAAATGTTCTGGGGCC
TCGCCGCCATCACCGCCTCCGAAACCGGCTTCCCCGAAGTCTCCGGCAAA
CCCTCATGGACGTCTCTCGCGCGCGCCGTTTTCAACATGCAAGTCAACCG
CTGGGACGACACCACCTGTGACGGCGGCATGCGCTGGCAGATCTGGCCCT
ACCAGGCGGGATACACGATGAAGAACGCCATCTCGAACGGGGGTCTCTTC
GAGCTCTCTGCCCGACTCGCCCGGTTCACCAAGAACGATACGTATGCCGA
GTGGGCAGAGAAGATCTTCGACTGGTCGACGACGACACCGCTCCTGAACA
CGAATGCAACGATATGGAACGTGGCGGATAGTACCTCCAACGAAGCCAAC
TGCAAGGACGTGGGAAATAACCAGTGGACCTACAACTACGGGACGTATCT
GTCCGGTGCGGCGTTCATGTATAACTACGTATGCTCCTTCCCCCAACACG
TCCCTTCCAATCAGAATCCCCGCTAACAAAGAAAATGAAATAGACCAATG
GCTCCACCAAATGGGAAGAAAGGGTAAACAACCTCCTCACCTCCCTAACC
ACCAAATTCTTCCCGGAGAACTTCAACAACGGCACCGTCCTCTCAGAAGT
AACCTGTGAACCGATCCTGTCCTGCGACCGCAACCAACTCGGCTTCAAGG
GGTACGTGGCAATGTGGCTTGCCTTCACGGCGCTGCTCGTCCCCTCGACT
CACGACCTCATCCTCCCCAAACTGCAAGGCTCCGCGGCAGCCATCTCAAA
GCAGTGTTCGGGGACCGGCGACGGATTGGAGAACCTGTGCGGCGTGCGCT
GGCACCAGGCTACCTGGGATGGAAGTATGGGACTAGAAGTACAGATGAGT
GCGTTGGGCGGAGTGACGGGGGCGTTGATGATGTTGGGGGATGGTAGTTC
CGGACCGCAGACGATCGATGAGAATCCGGATGCGGCGGAACATCATATTG
ATACGAGTGAAGATGAGAAGGACCCGACGGCGAAGGAGAAGATTGATACG
GGGGATAGAGCTGGAGCGTGGATTCTGACGGTGGTGCTGGCGGGGTTGAT
GTTGGGGGCTGTGGGGTGGTTGGTAAAGGCGCAGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:691561..693147-

>ASPNIDRAFT_173507-T1 ID=ASPNIDRAFT_173507-T1|Name=ASPNIDRAFT_173507-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5556bp|location=Sequence derived from alignment at ACJE01000010.1:691561..693147- (Aspergillus niger ATCC 1015)
ACCAATGGCTCCACCAAATGGGAAGAAAGGGTAAACAACCTCCTCACCTC
CCTAACCACCAAATTCTTCCCGGAGAACTTCAACAACGGCACCGTCCTCT
CAGAAGTAACCTGTGAACCGATCCTGTCCTGCGACCGCAACCAACTCGGC
TTCAAGGGGTACGTGGCAATGTGGCTTGCCTTCACGGCGCTGCTCGTCCC
CTCGACTCACGACCTCATCCTCCCCAAACTGCAAGGCTCCGCGGCAGCCA
TCTCAAAGCAGTGTTCGGGGACCGGCGACGGATTGGAGAACCTGTGCGGC
GTGCGCTGGCACCAGGCTACCTGGGATGGAAGTATGGGACTAGAAGTACA
GATGAGTGCGTTGGGCGGAGTGACGGGGGCGTTGATGATGTTGGGGGATG
GTAGTTCCGGACCGCAGACGATCGATGAGAATCCGGATGCGGCGGAACAT
CATATTGATACGAGTGAAGATGAGAAGGACCCGACGGCGAAGGAGAAGAT
TGATACGGGGGATAGAGCTGGAGCGTGGATTCTGACGGTGGTGCTGGCGG
GGTTGATGTTGGGGGCTGTGGGGTGGTTGGTAAAGGCGCAGTGAGGCAAC
GACGACCAAATGTTCTGGGGCCTCGCCGCCATCACCGCCTCCGAAACCGG
CTTCCCCGAAGTCTCCGGCAAACCCTCATGGACGTCTCTCGCGCGCGCCG
TTTTCAACATGCAAGTCAACCGCTGGGACGACACCACCTGTGACGGCGGC
ATGCGCTGGCAGATCTGGCCCTACCAGGCGGGATACACGATGAAGAACGC
CATCTCGAACGGGGGTCTCTTCGAGCTCTCTGCCCGACTCGCCCGGTTCA
CCAAGAACGATACGTATGCCGAGTGGGCAGAGAAGATCTTCGACTGGTCG
ACGACGACACCGCTCCTGAACACGAATGCAACGATATGGAACGTGGCGGA
TAGTACCTCCAACGAAGCCAACTGCAAGGACGTGGGAAATAACCAGTGGA
CCTACAACTACGGGACGTATCTGTCCGGTGCGGCGTTCATGTATAACTAC
ACTCCCTCGCAAACGCCGGCTCCACCATCGCCGATCCCTTGATGGAATTC
TACAAACAGAACCAAACCGAAGGCATCCCCGGCAAGCTCACCGACACCTG
GTACATTGCGGGGGCCATGTTCATGACCCTGATCCAATTCTGGAAGGCCT
CAGGCGTCGACACCTACAATTCCGTCGTGCAGCATGACCTGATGTTCCAA
GCCGGCGAGAACTACGACTACTTCTCCTCCAACTACAGTCAATGGCTGAT
GCGCAGTCACCACATAACCGCCTTCCTGCTGCTCCTGTTACACAGTCAAC
GGGCATATTCCGACCTGGGTATACAAGTCAACGATGCCAACCAATGGCTC
CACCAAATGGGAAGAAAGGGTAAACAACCTCCTCACCTCCCTAACCACCA
AATTCTTCCCGGAGAACTTCAACAACGGCACCGTCCTCTCAGAAGTAACC
TGTGAACCGATCCTGTCCTGCGACCGCAACCAACTCGGCTTCAAGGGGTA
CGTGGCAATGTGGCTTGCCTTCACGGCGCTGCTCGTCCCCTCGACTCACG
ACCTCATCCTCCCCAAACTGCAAGGCTCCGCGGCAGCCATCTCAAAGCAG
TGTTCGGGGACCGGCGACGGATTGGAGAACCTGTGCGGCGTGCGCTGGCA
CCAGGCTACCTGGGATGGAAGTATGGGACTAGAAGTACAGATGAGTGCGT
TGGGCGGAGTGACGGGGGCGTTGATGATGTTGGGGGATGGTAGTTCCGGA
CCGCAGACGATCGATGAGAATCCGGATGCGGCGGAACATCATATTGATAC
GAGTGAAGATGAGAAGGACCCGACGGCGAAGGAGAAGATTGATACGGGGG
ATAGAGCTGGAGCGTGGATTCTGACGGTGGTGCTGGCGGGGTTGATGTTG
GGGGCTGTGGGGTGGTTGGTAAAGGCGCAGTGAGGCAACGACGACCAAAT
GTTCTGGGGCCTCGCCGCCATCACCGCCTCCGAAACCGGCTTCCCCGAAG
TCTCCGGCAAACCCTCATGGACGTCTCTCGCGCGCGCCGTTTTCAACATG
CAAGTCAACCGCTGGGACGACACCACCTGTGACGGCGGCATGCGCTGGCA
GATCTGGCCCTACCAGGCGGGATACACGATGAAGAACGCCATCTCGAACG
GGGGTCTCTTCGAGCTCTCTGCCCGACTCGCCCGGTTCACCAAGAACGAT
ACGTATGCCGAGTGGGCAGAGAAGATCTTCGACTGGTCGACGACGACACC
GCTCCTGAACACGAATGCAACGATATGGAACGTGGCGGATAGTACCTCCA
ACGAAGCCAACTGCAAGGACGTGGGAAATAACCAGTGGACCTACAACTAC
GGGACGTATCTGTCCGGTGCGGCGTTCATGTATAACTACACTCCCTCGCA
AACGCCGGCTCCACCATCGCCGATCCCTTGATGGAATTCTACAAACAGAA
CCAAACCGAAGGCATCCCCGGCAAGCTCACCGACACCTGGTACATTGCGG
GGGCCATGTTCATGACCCTGATCCAATTCTGGAAGGCCTCAGGCGTCGAC
ACCTACAATTCCGTCGTGCAGCATGACCTGATGTTCCAAGCCGGCGAGAA
CTACGACTACTTCTCCTCCAACTACAGTCAATGGCTGATGCGCAGTCACC
ACATAACCGCCTTCCTGCTGCTCCTGTTACACAGTCAACGGGCATATTCC
GACCTGGGTATACAAGTCAACGATGCCAACCAATGGCTCCACCAAATGGG
AAGAAAGGGTAAACAACCTCCTCACCTCCCTAACCACCAAATTCTTCCCG
GAGAACTTCAACAACGGCACCGTCCTCTCAGAAGTAACCTGTGAACCGAT
CCTGTCCTGCGACCGCAACCAACTCGGCTTCAAGGGGTACGTGGCAATGT
GGCTTGCCTTCACGGCGCTGCTCGTCCCCTCGACTCACGACCTCATCCTC
CCCAAACTGCAAGGCTCCGCGGCAGCCATCTCAAAGCAGTGTTCGGGGAC
CGGCGACGGATTGGAGAACCTGTGCGGCGTGCGCTGGCACCAGGCTACCT
GGGATGGAAGTATGGGACTAGAAGTACAGATGAGTGCGTTGGGCGGAGTG
ACGGGGGCGTTGATGATGTTGGGGGATGGTAGTTCCGGACCGCAGACGAT
CGATGAGAATCCGGATGCGGCGGAACATCATATTGATACGAGTGAAGATG
AGAAGGACCCGACGGCGAAGGAGAAGATTGATACGGGGGATAGAGCTGGA
GCGTGGATTCTGACGGTGGTGCTGGCGGGGTTGATGTTGGGGGCTGTGGG
GTGGTTGGTAAAGGCGCAGTGAGGCAACGACGACCAAATGTTCTGGGGCC
TCGCCGCCATCACCGCCTCCGAAACCGGCTTCCCCGAAGTCTCCGGCAAA
CCCTCATGGACGTCTCTCGCGCGCGCCGTTTTCAACATGCAAGTCAACCG
CTGGGACGACACCACCTGTGACGGCGGCATGCGCTGGCAGATCTGGCCCT
ACCAGGCGGGATACACGATGAAGAACGCCATCTCGAACGGGGGTCTCTTC
GAGCTCTCTGCCCGACTCGCCCGGTTCACCAAGAACGATACGTATGCCGA
GTGGGCAGAGAAGATCTTCGACTGGTCGACGACGACACCGCTCCTGAACA
CGAATGCAACGATATGGAACGTGGCGGATAGTACCTCCAACGAAGCCAAC
TGCAAGGACGTGGGAAATAACCAGTGGACCTACAACTACGGGACGTATCT
GTCCGGTGCGGCGTTCATGTATAACTACACTCCCTCGCAAACGCCGGCTC
CACCATCGCCGATCCCTTGATGGAATTCTACAAACAGAACCAAACCGAAG
GCATCCCCGGCAAGCTCACCGACACCTGGTACATTGCGGGGGCCATGTTC
ATGACCCTGATCCAATTCTGGAAGGCCTCAGGCGTCGACACCTACAATTC
CGTCGTGCAGCATGACCTGATGTTCCAAGCCGGCGAGAACTACGACTACT
TCTCCTCCAACTACAGTCAATGGCTGATGCGCAGTCACCACATAACCGCC
TTCCTGCTGCTCCTGTTACACAGTCAACGGGCATATTCCGACCTGGGTAT
ACAAGTCAACGATGCCAACCAATGGCTCCACCAAATGGGAAGAAAGGGTA
AACAACCTCCTCACCTCCCTAACCACCAAATTCTTCCCGGAGAACTTCAA
CAACGGCACCGTCCTCTCAGAAGTAACCTGTGAACCGATCCTGTCCTGCG
ACCGCAACCAACTCGGCTTCAAGGGGTACGTGGCAATGTGGCTTGCCTTC
ACGGCGCTGCTCGTCCCCTCGACTCACGACCTCATCCTCCCCAAACTGCA
AGGCTCCGCGGCAGCCATCTCAAAGCAGTGTTCGGGGACCGGCGACGGAT
TGGAGAACCTGTGCGGCGTGCGCTGGCACCAGGCTACCTGGGATGGAAGT
ATGGGACTAGAAGTACAGATGAGTGCGTTGGGCGGAGTGACGGGGGCGTT
GATGATGTTGGGGGATGGTAGTTCCGGACCGCAGACGATCGATGAGAATC
CGGATGCGGCGGAACATCATATTGATACGAGTGAAGATGAGAAGGACCCG
ACGGCGAAGGAGAAGATTGATACGGGGGATAGAGCTGGAGCGTGGATTCT
GACGGTGGTGCTGGCGGGGTTGATGTTGGGGGCTGTGGGGTGGTTGGTAA
AGGCGCAGTGAGGCAACGACGACCAAATGTTCTGGGGCCTCGCCGCCATC
ACCGCCTCCGAAACCGGCTTCCCCGAAGTCTCCGGCAAACCCTCATGGAC
GTCTCTCGCGCGCGCCGTTTTCAACATGCAAGTCAACCGCTGGGACGACA
CCACCTGTGACGGCGGCATGCGCTGGCAGATCTGGCCCTACCAGGCGGGA
TACACGATGAAGAACGCCATCTCGAACGGGGGTCTCTTCGAGCTCTCTGC
CCGACTCGCCCGGTTCACCAAGAACGATACGTATGCCGAGTGGGCAGAGA
AGATCTTCGACTGGTCGACGACGACACCGCTCCTGAACACGAATGCAACG
ATATGGAACGTGGCGGATAGTACCTCCAACGAAGCCAACTGCAAGGACGT
GGGAAATAACCAGTGGACCTACAACTACGGGACGTATCTGTCCGGTGCGG
CGTTCATGTATAACTACACTCCCTCGCAAACGCCGGCTCCACCATCGCCG
ATCCCTTGATGGAATTCTACAAACAGAACCAAACCGAAGGCATCCCCGGC
AAGCTCACCGACACCTGGTACATTGCGGGGGCCATGTTCATGACCCTGAT
CCAATTCTGGAAGGCCTCAGGCGTCGACACCTACAATTCCGTCGTGCAGC
ATGACCTGATGTTCCAAGCCGGCGAGAACTACGACTACTTCTCCTCCAAC
TACAGTCAATGGCTGATGCGCAGTCACCACATAACCGCCTTCCTGCTGCT
CCTGTTACACAGTCAACGGGCATATTCCGACCTGGGTATACAAGTCAACG
ATGCCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173507ASPNIDRAFT_173507Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173507-T1ASPNIDRAFT_173507-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173507-T1.cdsASPNIDRAFT_173507-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173507-T1.exon4ASPNIDRAFT_173507-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173507-T1.exon3ASPNIDRAFT_173507-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173507-T1.exon2ASPNIDRAFT_173507-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173507-T1.exon1ASPNIDRAFT_173507-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR014480
DBxrefInterPro:IPR005198
DBxrefPFAM:PF03663
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:691561..693147 -
Powered by Drupal