|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:1706086..1707331- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_174055-T1 ID=ASPNIDRAFT_174055-T1|Name=ASPNIDRAFT_174055-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1246bp|location=Sequence derived from alignment at ACJE01000010.1:1706086..1707331- (Aspergillus niger ATCC 1015)
ATGGCTGGATCAGGGAAGAGAGCCATGCCTGATAGGAAATCCGTTCAGCC
TGCTAAGAAGAGAAAGGTCCGCCCCATCTGATGTCCGTGGCATGTTGACC
ACAGACGTCTCACCATTGGCTTTTCCGCATCTGGTAATCAATGTCTAACG
CGTGGCGGCACAGGGAGGTGGCCAATGGCAGAAACACCAACAAGGCAATA
AGTCGGGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCGTGCGATCTG
GGAAAGGAAGGGAAATGTATGGCAGAGGTAGTGGATGTTTTCTCGCAGGT
TAGTAGCATGAATGACAGGGCTTTGTGAATAGAAGGCGACCCACGGTATC
TGGCAGATTGATGCGATCTGATATGCTCATCCATCTGACTTGTGTTATTT
CCCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGAC
TCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGAGA
GGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCA
TCAGAATGGATTTGCCATGTCGTGCGTTAACCCTCGTTCTCCTCCTTAGA
TTGATCTAGGTTTTGAGAGACGCTAATATACTTCAGTGTTGTTTGTGCGA
TTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGA
CGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATCCAACGCATGA
CACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTT
GCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAA
GGTGAGTCTCGGTCTCACCGTAAGGCTTAGATGGTCATGAACTCCCATTA
ACCAGAAAATTTCAGTACGCAATTCGACCTGTGGTGAGAAGCAACAAGAA
GTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCG
AACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTT
ATCCAGGTCAGTTTTCTACGGACGTAGTGTGGTGTTTAAGTCGCTCATAC
AAGTACCGTAACTGACAATAAATTATCAGAATGTCATTGGCATGAGTGTT
GCCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATA
CAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAA back to topCoding sequence (CDS) from alignment at ACJE01000010.1:1706086..1707331- >ASPNIDRAFT_174055-T1 ID=ASPNIDRAFT_174055-T1|Name=ASPNIDRAFT_174055-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4932bp|location=Sequence derived from alignment at ACJE01000010.1:1706086..1707331- (Aspergillus niger ATCC 1015)
AATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAA
GTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCG
AATCTACTAAGGACTAATACGCAATTCGACCTGTGGTGAGAAGCAACAAG
AAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCC
CGAACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCG
TTATCCAGTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAA
TGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGA
TCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCT
CAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCC
ATTCCGGGGGACCTCCCAAAAAGTCATGGAGGCAAGCTCGACTCGGATGA
GGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAG
GCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATG
GATTTGCCATGTCAAACACCAACAAGGCAATAAGTCGGGCATTGAGGGAG
GCGACTGGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGGAAGGGAAATGT
ATGGCAGAGGTAGTGGATGTTTTCTCGCAGGTTAGTAGCATGAATGACAG
GGCTTTATGGCTGGATCAGGGAAGAGAGCCATGCCTGATAGGAAATCCGT
TCAGCCTGCTAAGAAGAGAAAGAATGTCATTGGCATGAGTGTTGCCGGAA
GTGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCA
GCACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAATACGCAATTCG
ACCTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGA
CCGTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTAT
GACTTGATCATTCTCGTCACCGTTATCCAGTGTTGTTTGTGCGATTTGAC
AAATCCATCAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGC
TGCTAATCCTGAAAAGAAACGATCCCGATGGATCCAACGCATGACACCTG
CAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGG
GAAATACTCAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTCATG
GAGGCAAGCTCGACTCGGATGAGGAGGATGACGATGATGACATCGAGGCC
CAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCG
CCCGTTTCATGCCATCAGAATGGATTTGCCATGTCAAACACCAACAAGGC
AATAAGTCGGGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCGTGCGA
TCTGGGAAAGGAAGGGAAATGTATGGCAGAGGTAGTGGATGTTTTCTCGC
AGGTTAGTAGCATGAATGACAGGGCTTTATGGCTGGATCAGGGAAGAGAG
CCATGCCTGATAGGAAATCCGTTCAGCCTGCTAAGAAGAGAAAGAATGTC
ATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAGTATAA
CCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTA
CTAAGGACTAATACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTC
AACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACA
TCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTATCC
AGTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTAC
ATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGA
TGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGT
CGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCG
GGGGACCTCCCAAAAAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGA
TGACGATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGA
AGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTG
CCATGTCAAACACCAACAAGGCAATAAGTCGGGCATTGAGGGAGGCGACT
GGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGGAAGGGAAATGTATGGCA
GAGGTAGTGGATGTTTTCTCGCAGGTTAGTAGCATGAATGACAGGGCTTT
ATGGCTGGATCAGGGAAGAGAGCCATGCCTGATAGGAAATCCGTTCAGCC
TGCTAAGAAGAGAAAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACT
ATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCT
ACGTCAGAGGCCGCCGAATCTACTAAGGACTAATACGCAATTCGACCTGT
GGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTG
CAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTG
ATCATTCTCGTCACCGTTATCCAGTGTTGTTTGTGCGATTTGACAAATCC
ATCAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAA
TCCTGAAAAGAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTT
CCGTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATA
CTCAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTCATGGAGGCA
AGCTCGACTCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATC
AGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTT
TCATGCCATCAGAATGGATTTGCCATGTCAAACACCAACAAGGCAATAAG
TCGGGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCGTGCGATCTGGG
AAAGGAAGGGAAATGTATGGCAGAGGTAGTGGATGTTTTCTCGCAGGTTA
GTAGCATGAATGACAGGGCTTTATGGCTGGATCAGGGAAGAGAGCCATGC
CTGATAGGAAATCCGTTCAGCCTGCTAAGAAGAGAAAGAATGTCATTGGC
ATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGC
CGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGG
ACTAATACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTCAACCGC
GACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACATCCCGT
TGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTATCCAGTGTT
GTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGC
TTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATC
CAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCT
GGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGAC
CTCCCAAAAAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGA
TGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCA
GCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGT
CAAACACCAACAAGGCAATAAGTCGGGCATTGAGGGAGGCGACTGGGGAG
TCTTCGTGTCGTGCGATCTGGGAAAGGAAGGGAAATGTATGGCAGAGGTA
GTGGATGTTTTCTCGCAGGTTAGTAGCATGAATGACAGGGCTTTATGGCT
GGATCAGGGAAGAGAGCCATGCCTGATAGGAAATCCGTTCAGCCTGCTAA
GAAGAGAAAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATC
GGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCA
GAGGCCGCCGAATCTACTAAGGACTAATACGCAATTCGACCTGTGGTGAG
AAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATG
TCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTGATCATT
CTCGTCACCGTTATCCAGTGTTGTTTGTGCGATTTGACAAATCCATCAAT
CCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGA
AAAGAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTC
GCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAA
CCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTCATGGAGGCAAGCTCG
ACTCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGA
GAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGC
CATCAGAATGGATTTGCCATGTCAAACACCAACAAGGCAATAAGTCGGGC
ATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGGA
AGGGAAATGTATGGCAGAGGTAGTGGATGTTTTCTCGCAGGTTAGTAGCA
TGAATGACAGGGCTTTATGGCTGGATCAGGGAAGAGAGCCATGCCTGATA
GGAAATCCGTTCAGCCTGCTAAGAAGAGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006400 | tRNA modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264829 |
| DBxref | InterPro:IPR040183 |
| DBxref | InterPro:IPR004114 |
| DBxref | PFAM:PF02926 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:1706086..1707331 - |
|
