You are here

Home

ASPNIDRAFT_197480-T1, ASPNIDRAFT_197480-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197480-T1
Unique NameASPNIDRAFT_197480-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1837665..1838685+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197480-T1 ID=ASPNIDRAFT_197480-T1|Name=ASPNIDRAFT_197480-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1021bp|location=Sequence derived from alignment at ACJE01000010.1:1837665..1838685+ (Aspergillus niger ATCC 1015)
ATCATCCCTTGCTAAATAACTATACCCTTCACTCCTAAAATAACAACAAT
GCCTCCACGTCTTTCTATATATACTCCGTTACGATCCACTTTCTCCTACC
GCGTCACGGTCGCCAGATTTAGCACGAGCAGCGACAATGCCGTCATCCAG
ACCCAGCACGTTCCCGCCCCAGGGTCGGGGAACATTCGCGTCCTGCTTTT
GAACCGGCCCAAGGCACGCAACGCAATCTCTCGCGATCTCCTCGACGGGC
TTGCCAGGAATGTTAAATCTATTGCCGCTGAAGGAGGCTCAGGGCCAACG
CGTGCTCTGGTCATCGGCAGCAACGTCGACTCGGCCTTCTGCGCGGGCGC
AGATCTCAAGGAACGTGCGGGCATGAGCCGGGAAGAGTACGCGGCCCTCC
AGTTCCCCAAACCCCATCACAAACTACTGACCGTTGCAATTGCCATGGCT
TAGAACAGCCGAATTCTTATACAATCTGCGAAGCACCTTCCGCAACCTCT
CGGAGCTCCCCATTCCCACCATCTCCGCCGTTTCCTCTATGGCGCTGGGC
GGCGGCCTTGAACTTGCTCTAAGCACACATCTTCGCGTCTTCGGCTCCTC
GTGTATGGTCGGACTTCCCGAGACAAGGTTGGCCATTATTCCTGGGGCTG
GAGGTACCTATCGCCTCCCCAGTCTGATTGGCGTGAACCGTGCACGGGAC
CTTATTCTCACTGGACGGCGCGTATCCGGCCCGGAGTCGTATTTCATCGG
CCTATGCGATCGGCTTGTGGAGGTGCTCCCGGAAGAGGAAGGAAAGGAGG
GTGTGGCGAGGGAGAAGGTCCTCACGGAAAGTATCAAGCTGGCGCTGGAG
ATCTGTGAGGGCGGGCCAATTGCCATCAAGCAGGCCTTGAAGGCTGTGAG
TGAGTATCAACGGGGCGAGGAGGCTGAAAATGAGGCGTACGACGGCGTGA
TGGGCACCGAAGATCGGTTTGAGGCTCTCAGGGCGTTCGCGGAAAAGCGG
AAGCCCGTCTTCAGGGGGCGA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1837665..1838685+

>ASPNIDRAFT_197480-T1 ID=ASPNIDRAFT_197480-T1|Name=ASPNIDRAFT_197480-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1810bp|location=Sequence derived from alignment at ACJE01000010.1:1837665..1838685+ (Aspergillus niger ATCC 1015)
ATGCCTCCACGTCTTTCTATATATACTCCGTTACGATCCACTTTCTCCTA
CCGCGTCACGGTCGCCAGATTTAGCACGAGCAGCGACAATGCCGTCATCC
AGACCCAGCACGTTCCCGCCCCAGGGTCGGGGAACATTCGCGTCCTGCTT
TTGAACCGGCCCAAGGCACGCAACGCAATCTCTCGCGATCTCCTCGACGG
GCTTGCCAGGAATGTTAAATCTATTGCCGCTGAAGGAGGCTCAGGGCCAA
CGCGTGCTCTGGTCATCGGCAGCAACGTCGACTCGGCCTTCTGCGCGGGC
GCAGATCTCAAGGAACGTGCGGGCATGAGCCGGGAAGAAACAGCCGAATT
CTTATACAATCTGCGAAGCACCTTCCGCAACCTCTCGGAGCTCCCCATTC
CCACCATCTCCGCCGTTTCCTCTATGGCGCTGGGCGGCGGCCTTGAACTT
GCTCTAAGCACACATCTTCGCGTCTTCGGCTCCTCGTGTATGGTCGGACT
TCCCGAGACAAGGTTGGCCATTATTCCTGGGGCTGGAGGTACCTATCGCC
TCCCCAGTCTGATTGGCGTGAACCGTGCACGGGACCTTATTCTCACTGGA
CGGCGCGTATCCGGCCCGGAGTCGTATTTCATCGGCCTATGCGATCGGCT
TGTGGAGGTGCTCCCGGAAGAGGAAGGAAAGGAGGGTGTGGCGAGGGAGA
AGGTCCTCACGGAAAGTATCAAGCTGGCGCTGGAGATCTGTGAGGGCGGG
CCAATTGCCATCAAGCAGGCCTTGAAGGCTGTGAGTGAGTATCAACGGGG
CGAGGAGGCTGAAAATGAGGCGTACGACGGCGTGATGGGCACCGAAGATC
GGTTTGAGGCTCTCAGGGCGTTCGCGGAAAAGCGGAAGCCCGTCTTCAGG
GGGCGATGCCTCCACGTCTTTCTATATATACTCCGTTACGATCCACTTTC
TCCTACCGCGTCACGGTCGCCAGATTTAGCACGAGCAGCGACAATGCCGT
CATCCAGACCCAGCACGTTCCCGCCCCAGGGTCGGGGAACATTCGCGTCC
TGCTTTTGAACCGGCCCAAGGCACGCAACGCAATCTCTCGCGATCTCCTC
GACGGGCTTGCCAGGAATGTTAAATCTATTGCCGCTGAAGGAGGCTCAGG
GCCAACGCGTGCTCTGGTCATCGGCAGCAACGTCGACTCGGCCTTCTGCG
CGGGCGCAGATCTCAAGGAACGTGCGGGCATGAGCCGGGAAGAAACAGCC
GAATTCTTATACAATCTGCGAAGCACCTTCCGCAACCTCTCGGAGCTCCC
CATTCCCACCATCTCCGCCGTTTCCTCTATGGCGCTGGGCGGCGGCCTTG
AACTTGCTCTAAGCACACATCTTCGCGTCTTCGGCTCCTCGTGTATGGTC
GGACTTCCCGAGACAAGGTTGGCCATTATTCCTGGGGCTGGAGGTACCTA
TCGCCTCCCCAGTCTGATTGGCGTGAACCGTGCACGGGACCTTATTCTCA
CTGGACGGCGCGTATCCGGCCCGGAGTCGTATTTCATCGGCCTATGCGAT
CGGCTTGTGGAGGTGCTCCCGGAAGAGGAAGGAAAGGAGGGTGTGGCGAG
GGAGAAGGTCCTCACGGAAAGTATCAAGCTGGCGCTGGAGATCTGTGAGG
GCGGGCCAATTGCCATCAAGCAGGCCTTGAAGGCTGTGAGTGAGTATCAA
CGGGGCGAGGAGGCTGAAAATGAGGCGTACGACGGCGTGATGGGCACCGA
AGATCGGTTTGAGGCTCTCAGGGCGTTCGCGGAAAAGCGGAAGCCCGTCT
TCAGGGGGCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197480ASPNIDRAFT_197480Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197480-T1.utr5p1ASPNIDRAFT_197480-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197480-T1.exon1ASPNIDRAFT_197480-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197480-T1.exon2ASPNIDRAFT_197480-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197480-T1.cdsASPNIDRAFT_197480-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197480-T1ASPNIDRAFT_197480-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR014748
DBxrefInterPro:IPR001753
DBxrefPFAM:PF16113
DBxrefPFAM:PF00378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1837665..1838685 +
Powered by Drupal