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ASPNIDRAFT_174424-T1, ASPNIDRAFT_174424-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_174424-T1
Unique NameASPNIDRAFT_174424-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2261000..2262907-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_174424-T1 ID=ASPNIDRAFT_174424-T1|Name=ASPNIDRAFT_174424-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1908bp|location=Sequence derived from alignment at ACJE01000010.1:2261000..2262907- (Aspergillus niger ATCC 1015)
ATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAATG
GCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTGTCAGTAC
TATTTCATGACGCGATACAATGATCGAATTTGATGCTGAATTATGCACAG
ATACAAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAAC
ACCCCTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGAT
CGCTTGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAAT
GCCCGGACATCCTCAAAAATGTAAGTCTCGGTAGTACTGTCGTGTCTGAG
CAGGCCCTAAAAATCGTAGCGGCAAGCAGCAAAAGAGCATCCGATGAGGG
CACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATG
TCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACC
CTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTT
GGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCA
AATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATT
GTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGG
ATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAG
GCACTTTGGCGTTTGGGAATCAATCGGTAACAAATCCAATACCTAATATG
CTATGACGATGTCTAACCTGCGTAGGGGCCAAGCACAAGCCATACTGGGG
ACACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGAC
GATGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGC
TTCTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGG
TCCAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGAT
TACATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGC
ACTAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGT
TCCTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATC
GTTGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACG
GTTCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCA
TCTACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATG
GCCGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGT
CGTCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTC
AATACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCT
GCCGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCT
CTCCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGA
GCCCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACC
TCCAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCAT
GTGCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGT
GGCCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAG
GACCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAA
GAAGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGG
ATGGGTGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2261000..2262907-

>ASPNIDRAFT_174424-T1 ID=ASPNIDRAFT_174424-T1|Name=ASPNIDRAFT_174424-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7008bp|location=Sequence derived from alignment at ACJE01000010.1:2261000..2262907- (Aspergillus niger ATCC 1015)
GGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAACATGGG
TGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAGCCCATA
ACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACTCCCATA
ACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAACCGCGA
AGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTACACAAGA
AGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTCATGTGG
GTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGAGGAAGG
CGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCGACGATC
TCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTCCGTCTC
CGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATTCACCGT
CCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAATGGTAG
CGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTTAAGAGA
ACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGACCCTCCT
GCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCTCCACCC
TCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATACCTCACG
GCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGCCGTCAC
CTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGACCCTCC
GAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACGGGCGAA
AAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATTCATCCG
TGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTTCAGAAC
GGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTGAGCAAG
AAAATCGCAGAGGTATGGGGTGAGGATGGGTGACAAAAGAGCATCCGATG
AGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCT
TATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGC
AACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTG
ACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCG
TCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGA
GATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAG
AGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAAT
CAAGGCACTTTGGCGTTTGGGAATCAATCGATACAAAAAGGCGTACGAGT
CGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCCGAGGCTCAGCAG
CTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGACCGAAAAGCTAAA
GGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGGACATCCTCAAAAAT
GTAAGTCTCGATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGA
TCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATA
GTGGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAACATG
GGTGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAGCCCA
TAACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACTCCCA
TAACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAACCGC
GAAGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTACACAA
GAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTCATGT
GGGTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGAGGAA
GGCGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCGACGA
TCTCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTCCGTC
TCCGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATTCACC
GTCCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAATGGT
AGCGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTTAAGA
GAACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGACCCTC
CTGCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCTCCAC
CCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATACCTCA
CGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGCCGTC
ACCTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGACCCT
CCGAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACGGGCG
AAAAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATTCATC
CGTGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTTCAGA
ACGGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTGAGCA
AGAAAATCGCAGAGGTATGGGGTGAGGATGGGTGACAAAAGAGCATCCGA
TGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGAC
CTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTG
GCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGAT
TGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGT
CGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAG
GAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGA
AGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAA
ATCAAGGCACTTTGGCGTTTGGGAATCAATCGATACAAAAAGGCGTACGA
GTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCCGAGGCTCAGC
AGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGACCGAAAAGCTA
AAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGGACATCCTCAAAA
ATGTAAGTCTCGATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTG
GATCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCA
TAGTGGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAACA
TGGGTGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAGCC
CATAACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACTCC
CATAACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAACC
GCGAAGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTACAC
AAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTCAT
GTGGGTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGAGG
AAGGCGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCGAC
GATCTCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTCCG
TCTCCGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATTCA
CCGTCCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAATG
GTAGCGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTTAA
GAGAACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGACCC
TCCTGCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCTCC
ACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATACCT
CACGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGCCG
TCACCTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGACC
CTCCGAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACGGG
CGAAAAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATTCA
TCCGTGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTTCA
GAACGGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTGAG
CAAGAAAATCGCAGAGGTATGGGGTGAGGATGGGTGACAAAAGAGCATCC
GATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAG
ACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCC
TGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTG
ATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGA
GTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGA
AGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACA
GAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTC
AAATCAAGGCACTTTGGCGTTTGGGAATCAATCGATACAAAAAGGCGTAC
GAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCCGAGGCTCA
GCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGACCGAAAAGC
TAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGGACATCCTCAA
AAATGTAAGTCTCGATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGG
TGGATCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGC
CATAGTGGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAA
CATGGGTGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAG
CCCATAACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACT
CCCATAACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAA
CCGCGAAGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTAC
ACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTC
ATGTGGGTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGA
GGAAGGCGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCG
ACGATCTCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTC
CGTCTCCGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATT
CACCGTCCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAA
TGGTAGCGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTT
AAGAGAACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGAC
CCTCCTGCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCT
CCACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATAC
CTCACGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGC
CGTCACCTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGA
CCCTCCGAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACG
GGCGAAAAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATT
CATCCGTGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTT
CAGAACGGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTG
AGCAAGAAAATCGCAGAGGTATGGGGTGAGGATGGGTGACAAAAGAGCAT
CCGATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCA
AGACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGC
CCTGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAAC
TGATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCC
GAGTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCA
GAAGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCA
CAGAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCG
TCAAATCAAGGCACTTTGGCGTTTGGGAATCAATCGATACAAAAAGGCGT
ACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCCGAGGCT
CAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGACCGAAAA
GCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGGACATCCTC
AAAAATGTAAGTCTCGATGAGTGAAACGTGCGCCAATCCCCTACTACTGG
GGTGGATCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGC
GCCATAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS81ASPNIDRAFT_174424Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174424-T1ASPNIDRAFT_174424-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174424-T1.cdsASPNIDRAFT_174424-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174424-T1.exon4ASPNIDRAFT_174424-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174424-T1.exon3ASPNIDRAFT_174424-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174424-T1.exon2ASPNIDRAFT_174424-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174424-T1.exon1ASPNIDRAFT_174424-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR011335
DBxrefInterPro:IPR027421
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR006166
DBxrefPFAM:PF02732
ProductCrossover junction endonuclease mus81
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2261000..2262907 -
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