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ASPNIDRAFT_52377-T1, ASPNIDRAFT_52377-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52377-T1
Unique NameASPNIDRAFT_52377-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2543122..2543704-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52377-T1 ID=ASPNIDRAFT_52377-T1|Name=ASPNIDRAFT_52377-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=583bp|location=Sequence derived from alignment at ACJE01000010.1:2543122..2543704- (Aspergillus niger ATCC 1015)
CACAATCGCATTATCTCTCCAATCCTCTACAAACAACACTTCTACTTTAG
TTTTAATAACTAATCTTTACCACTACAACCGACACCATGCGTTTCTCCAT
CATCTCTGTTTCCCTCCTCTCCCTCTTCGCCTCCTCGGCTCTGGCTGTCC
CCGCCGCTTCCGGCACCCTGAGCTGCAGCGACGTCAACTCGCAGCTCTCC
GGCTACGAGCAGCGCCTCGCAAAGGCCACTGACACCAGCTCCGCCAAGTA
CCAGGCCGCCCAGAACCTGGTTAACTCTGCCAAGAACCTCGAATCTGCCG
ACTGCGGCAGCTCCAGCAAGAGATCCTACTACCCTCCCGAGAGCACCGGT
CTCATTGGAGAGGTCCTGAACGCTCTTGACTCCCTCGTTAGTATCCCTTC
TTTAACATAGCTTCGGTTTGTGATACCCCATCTAACTTGTCACTTTAGCT
TGAGGCTCTCGGTCTGTAAACAGCCATCCTATCACCGAGAAGCGCGACTC
GACGTCGCGCCTGGGATCGTCCCTATCGAGTCCCTTCACAGAGTCGCCGG
ACGATGGAGGGATGCAATGTGCAGGATGGCCTC
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Coding sequence (CDS) from alignment at ACJE01000010.1:2543122..2543704-

>ASPNIDRAFT_52377-T1 ID=ASPNIDRAFT_52377-T1|Name=ASPNIDRAFT_52377-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=864bp|location=Sequence derived from alignment at ACJE01000010.1:2543122..2543704- (Aspergillus niger ATCC 1015)
TTGAGGCTCTCGGTCTGTAAACAGCCATCCTATCACCGAGAAGCGCGACT
CGACGTCGCGCCTGGGATCGTCCCTATCGAGTCCCTTCACAGAGTCGCCG
GACGATGGAGGGATGCAATGTGCAGGATGGCCATGCGTTTCTCCATCATC
TCTGTTTCCCTCCTCTCCCTCTTCGCCTCCTCGGCTCTGGCTGTCCCCGC
CGCTTCCGGCACCCTGAGCTGCAGCGACGTCAACTCGCAGCTCTCCGGCT
ACGAGCAGCGCCTCGCAAAGGCCACTGACACCAGCTCCGCCAAGTACCAG
GCCGCCCAGAACCTGGTTAACTCTGCCAAGAACCTCGAATCTGCCGACTG
CGGCAGCTCCAGCAAGAGATCCTACTACCCTCCCGAGAGCACCGGTCTCA
TTGGAGAGGTCCTGAACGCTCTTGACTCCCTCTTGAGGCTCTCGGTCTGT
AAACAGCCATCCTATCACCGAGAAGCGCGACTCGACGTCGCGCCTGGGAT
CGTCCCTATCGAGTCCCTTCACAGAGTCGCCGGACGATGGAGGGATGCAA
TGTGCAGGATGGCCATGCGTTTCTCCATCATCTCTGTTTCCCTCCTCTCC
CTCTTCGCCTCCTCGGCTCTGGCTGTCCCCGCCGCTTCCGGCACCCTGAG
CTGCAGCGACGTCAACTCGCAGCTCTCCGGCTACGAGCAGCGCCTCGCAA
AGGCCACTGACACCAGCTCCGCCAAGTACCAGGCCGCCCAGAACCTGGTT
AACTCTGCCAAGAACCTCGAATCTGCCGACTGCGGCAGCTCCAGCAAGAG
ATCCTACTACCCTCCCGAGAGCACCGGTCTCATTGGAGAGGTCCTGAACG
CTCTTGACTCCCTC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52377ASPNIDRAFT_52377Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52377-T1ASPNIDRAFT_52377-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52377-T1.cdsASPNIDRAFT_52377-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52377-T1.utr3p1ASPNIDRAFT_52377-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52377-T1.exon2ASPNIDRAFT_52377-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52377-T1.exon1ASPNIDRAFT_52377-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52377-T1.utr5p1ASPNIDRAFT_52377-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2543122..2543704 -
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