You are here

Home

ASPNIDRAFT_130186-T1, ASPNIDRAFT_130186-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_130186-T1
Unique NameASPNIDRAFT_130186-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2849835..2852049-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_130186-T1 ID=ASPNIDRAFT_130186-T1|Name=ASPNIDRAFT_130186-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2215bp|location=Sequence derived from alignment at ACJE01000010.1:2849835..2852049- (Aspergillus niger ATCC 1015)
AGATACGACCGCCCCCTCACATACGCCGAAAAAGTCCTTTACAGCCATCT
TGACATCACTTTTGACGAGCGCATCGAGCGCGGCAAAACCCAACTCAAAC
TACGCCCGCAACGCATAGCATGCCAAGATGCGACAGCCCAAATGGCACTT
ATCCAGTTCATGTCCGCGGGACTAGACACAGCGGCCGTACCAACCACAGT
CCACTGCGATCATTTGATCGTCAGTCGTGACGGCGAAACACAGGACCTCG
CTCGAGCGCTGGACAACCATAAAGAAGTGTACGATTTCCTCGAGTCTGCC
TGCCAGAAATACAACATGGGGTTCTGGAAGCCCGGCGCGGGAATCATTCA
CCAGATTGTGCTGGAGAACTACGCCTTCCCTAGTGGAATGATGGTCGGGA
CGGACTCTCATACTCCCAACGCAGGAGGCCTTGGCATGATAGCCATCGGA
GTTGGTGGTGCCGATGCGGTAGACGTGATGGCTGGATTGTCGCTGGAGCT
CCAAGCGCCAAAGGTATTGGGTGTCCGATTGACGGGGCAGTTGTCCGGAT
GGGCTTCGCCGAAGGATATTATCAATGCTGTAGCCGGGACGCTTTCCGTT
AAGGGAGGTACTGGGTCCATTATTGAATACTTTGGACCTGGGGCGCAGAC
TCTGTCAGCCACGGGCATGGCAACTGTGTGCAATATGGGTGCGGAAACAG
GTGCCACAACATCCATCTTCCCTTATGCGCCACAGATGGCGGATTATCTT
CGTGCTAATCATCGCCATGAGATGGCTGATGCTGTTAAGAGCATTGCACC
GGAATTGCAGGCTGATGAGGGGGCTGAGTATGATAATGTTATTGAGCTCG
ATTTGTCCACTCTCGAGCCACGGATCAATGGACCTTTCACGCCGGACTTT
TCTACCCCGGTGTCGCGGTTCGGTGAAGCCGTGGCGGAGAACCAGTGGCC
GGTTGAATTGACGGCAGCTTTGATTGGATCTTGTACTAACTCTTCGTTTG
AAGATATGGGACGTGCAGCTAGTCTTGCCCAGCAGGCATTGGATGCAGGA
CTGGAACCACAAATGCCCCTTCTGGTGTCGCCAGGTAGTGTTCAGACGCG
CGAGACGTTGGAAGATGCCGGTATTCTGCCGGTCTTCGAGAGACTCGGGG
CGACGATGCTTCCCAACGCCTGTGGTCCATGCTGTGGGTCGTGGGATCGA
GTTGATATGCCAAAGGTATAGTATGGCCATCCCATCTACCGAAAGACTGT
CTTTTGACATATATTAGGGCACCCCAAACTCCATAATAACCTCCTACAAC
CGGAACTTCTCCGGCCGTCTAGATTCCAACCCAGCAACCAACGTCTTCCT
AGCATCGCCCGAGCTCGTCATTGCAAAGGCCTTCTCCCGCGACCTCTCCT
TCAACCCAACAACTGACTCGCTCCCAACCCCATCCGGCGAGCAATTCCAC
TTCCTCCCTCCAACCAGCGATTCCCTCCCCTCAAAGGGCTACCTCTCCTC
CGACTCCGCCTACGCACCCCCACCGGCAAACCGGGATAACATCTCCGTCA
AAATCGACCCGTCATCCCTCCGCCTCCAGAAATTGTCCCCATTCCCACCC
TGGCCCGGCCACGACTTCAAAGACTGCGCCATCCTAATCAAAACAGCCGG
GAAATGCACAACGGACCACATCACCCCCGCTGGCCCGTGGTTCCGCTATA
GAGGCCACCTAGAAAACATCTCCAACAATACCCTCATCGGCGCAACCAAC
GCCGAGAACGGCAAGGTGAACAGTATCCGGAACCAGCTCACGAAGCAAGA
TGGACAGGAAGTGCCTGCTACAGCACGCCACTACAAAGAGAACAGCGTGC
CGTGGGTGGTTATCGCTGACCATAACTACGGGGAGGGCAGTTCGCGGGAA
CATGCGGCGCTGCAGCCGAGGTATCTAGGTGGTGTGGCGATTATCGCGAA
GTCATTTGCAAGAATCCATGAGGCGAATTTGAAGAAGCAGGGGTTGTTGG
CACTGACTTTCGACAATGAGAAGGATTATGAAAGGATTAGGGCTGAGGAT
CGGGTTAGTATTTTGGGGCTTAGGGAGGGGGAGTTTGTTCCGGGGAGCAC
TTTGAGGTTGGTAGTTAATGGGGGCGAGTGGGAGGCTGTGCTCAGGCATA
GTTTTACGGAGGAGCAGATTGGGTATTTTAGAAGTGGGAGTGCGTTGAAT
GTTATGGCGGGGAAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:2849835..2852049-

>ASPNIDRAFT_130186-T1 ID=ASPNIDRAFT_130186-T1|Name=ASPNIDRAFT_130186-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4320bp|location=Sequence derived from alignment at ACJE01000010.1:2849835..2852049- (Aspergillus niger ATCC 1015)
GGCACCCCAAACTCCATAATAACCTCCTACAACCGGAACTTCTCCGGCCG
TCTAGATTCCAACCCAGCAACCAACGTCTTCCTAGCATCGCCCGAGCTCG
TCATTGCAAAGGCCTTCTCCCGCGACCTCTCCTTCAACCCAACAACTGAC
TCGCTCCCAACCCCATCCGGCGAGCAATTCCACTTCCTCCCTCCAACCAG
CGATTCCCTCCCCTCAAAGGGCTACCTCTCCTCCGACTCCGCCTACGCAC
CCCCACCGGCAAACCGGGATAACATCTCCGTCAAAATCGACCCGTCATCC
CTCCGCCTCCAGAAATTGTCCCCATTCCCACCCTGGCCCGGCCACGACTT
CAAAGACTGCGCCATCCTAATCAAAACAGCCGGGAAATGCACAACGGACC
ACATCACCCCCGCTGGCCCGTGGTTCCGCTATAGAGGCCACCTAGAAAAC
ATCTCCAACAATACCCTCATCGGCGCAACCAACGCCGAGAACGGCAAGGT
GAACAGTATCCGGAACCAGCTCACGAAGCAAGATGGACAGGAAGTGCCTG
CTACAGCACGCCACTACAAAGAGAACAGCGTGCCGTGGGTGGTTATCGCT
GACCATAACTACGGGGAGGGCAGTTCGCGGGAACATGCGGCGCTGCAGCC
GAGGTATCTAGGTGGTGTGGCGATTATCGCGAAGTCATTTGCAAGAATCC
ATGAGGCGAATTTGAAGAAGCAGGGGTTGTTGGCACTGACTTTCGACAAT
GAGAAGGATTATGAAAGGATTAGGGCTGAGGATCGGGTTAGTATTTTGGG
GCTTAGGGAGGGGGAGTTTGTTCCGGGGAGCACTTTGAGGTTGGTAGTTA
ATGGGGGCGAGTGGGAGGCTGTGCTCAGGCATAGTTTTACGGAGGAGCAG
ATTGGGTATTTTAGAAGTGGGAGTGCGTTGAATGTTATGGCGGGGAGATA
CGACCGCCCCCTCACATACGCCGAAAAAGTCCTTTACAGCCATCTTGACA
TCACTTTTGACGAGCGCATCGAGCGCGGCAAAACCCAACTCAAACTACGC
CCGCAACGCATAGCATGCCAAGATGCGACAGCCCAAATGGCACTTATCCA
GTTCATGTCCGCGGGACTAGACACAGCGGCCGTACCAACCACAGTCCACT
GCGATCATTTGATCGTCAGTCGTGACGGCGAAACACAGGACCTCGCTCGA
GCGCTGGACAACCATAAAGAAGTGTACGATTTCCTCGAGTCTGCCTGCCA
GAAATACAACATGGGGTTCTGGAAGCCCGGCGCGGGAATCATTCACCAGA
TTGTGCTGGAGAACTACGCCTTCCCTAGTGGAATGATGGTCGGGACGGAC
TCTCATACTCCCAACGCAGGAGGCCTTGGCATGATAGCCATCGGAGTTGG
TGGTGCCGATGCGGTAGACGTGATGGCTGGATTGTCGCTGGAGCTCCAAG
CGCCAAAGGTATTGGGTGTCCGATTGACGGGGCAGTTGTCCGGATGGGCT
TCGCCGAAGGATATTATCAATGCTGTAGCCGGGACGCTTTCCGTTAAGGG
AGGTACTGGGTCCATTATTGAATACTTTGGACCTGGGGCGCAGACTCTGT
CAGCCACGGGCATGGCAACTGTGTGCAATATGGGTGCGGAAACAGGTGCC
ACAACATCCATCTTCCCTTATGCGCCACAGATGGCGGATTATCTTCGTGC
TAATCATCGCCATGAGATGGCTGATGCTGTTAAGAGCATTGCACCGGAAT
TGCAGGCTGATGAGGGGGCTGAGTATGATAATGTTATTGAGCTCGATTTG
TCCACTCTCGAGCCACGGATCAATGGACCTTTCACGCCGGACTTTTCTAC
CCCGGTGTCGCGGTTCGGTGAAGCCGTGGCGGAGAACCAGTGGCCGGTTG
AATTGACGGCAGCTTTGATTGGATCTTGTACTAACTCTTCGTTTGAAGAT
ATGGGACGTGCAGCTAGTCTTGCCCAGCAGGCATTGGATGCAGGACTGGA
ACCACAAATGCCCCTTCTGGTGTCGCCAGGTAGTGTTCAGACGCGCGAGA
CGTTGGAAGATGCCGGTATTCTGCCGGTCTTCGAGAGACTCGGGGCGACG
ATGCTTCCCAACGCCTGTGGTCCATGCTGTGGGTCGTGGGATCGAGTTGA
TATGCCAAAGGGCACCCCAAACTCCATAATAACCTCCTACAACCGGAACT
TCTCCGGCCGTCTAGATTCCAACCCAGCAACCAACGTCTTCCTAGCATCG
CCCGAGCTCGTCATTGCAAAGGCCTTCTCCCGCGACCTCTCCTTCAACCC
AACAACTGACTCGCTCCCAACCCCATCCGGCGAGCAATTCCACTTCCTCC
CTCCAACCAGCGATTCCCTCCCCTCAAAGGGCTACCTCTCCTCCGACTCC
GCCTACGCACCCCCACCGGCAAACCGGGATAACATCTCCGTCAAAATCGA
CCCGTCATCCCTCCGCCTCCAGAAATTGTCCCCATTCCCACCCTGGCCCG
GCCACGACTTCAAAGACTGCGCCATCCTAATCAAAACAGCCGGGAAATGC
ACAACGGACCACATCACCCCCGCTGGCCCGTGGTTCCGCTATAGAGGCCA
CCTAGAAAACATCTCCAACAATACCCTCATCGGCGCAACCAACGCCGAGA
ACGGCAAGGTGAACAGTATCCGGAACCAGCTCACGAAGCAAGATGGACAG
GAAGTGCCTGCTACAGCACGCCACTACAAAGAGAACAGCGTGCCGTGGGT
GGTTATCGCTGACCATAACTACGGGGAGGGCAGTTCGCGGGAACATGCGG
CGCTGCAGCCGAGGTATCTAGGTGGTGTGGCGATTATCGCGAAGTCATTT
GCAAGAATCCATGAGGCGAATTTGAAGAAGCAGGGGTTGTTGGCACTGAC
TTTCGACAATGAGAAGGATTATGAAAGGATTAGGGCTGAGGATCGGGTTA
GTATTTTGGGGCTTAGGGAGGGGGAGTTTGTTCCGGGGAGCACTTTGAGG
TTGGTAGTTAATGGGGGCGAGTGGGAGGCTGTGCTCAGGCATAGTTTTAC
GGAGGAGCAGATTGGGTATTTTAGAAGTGGGAGTGCGTTGAATGTTATGG
CGGGGAGATACGACCGCCCCCTCACATACGCCGAAAAAGTCCTTTACAGC
CATCTTGACATCACTTTTGACGAGCGCATCGAGCGCGGCAAAACCCAACT
CAAACTACGCCCGCAACGCATAGCATGCCAAGATGCGACAGCCCAAATGG
CACTTATCCAGTTCATGTCCGCGGGACTAGACACAGCGGCCGTACCAACC
ACAGTCCACTGCGATCATTTGATCGTCAGTCGTGACGGCGAAACACAGGA
CCTCGCTCGAGCGCTGGACAACCATAAAGAAGTGTACGATTTCCTCGAGT
CTGCCTGCCAGAAATACAACATGGGGTTCTGGAAGCCCGGCGCGGGAATC
ATTCACCAGATTGTGCTGGAGAACTACGCCTTCCCTAGTGGAATGATGGT
CGGGACGGACTCTCATACTCCCAACGCAGGAGGCCTTGGCATGATAGCCA
TCGGAGTTGGTGGTGCCGATGCGGTAGACGTGATGGCTGGATTGTCGCTG
GAGCTCCAAGCGCCAAAGGTATTGGGTGTCCGATTGACGGGGCAGTTGTC
CGGATGGGCTTCGCCGAAGGATATTATCAATGCTGTAGCCGGGACGCTTT
CCGTTAAGGGAGGTACTGGGTCCATTATTGAATACTTTGGACCTGGGGCG
CAGACTCTGTCAGCCACGGGCATGGCAACTGTGTGCAATATGGGTGCGGA
AACAGGTGCCACAACATCCATCTTCCCTTATGCGCCACAGATGGCGGATT
ATCTTCGTGCTAATCATCGCCATGAGATGGCTGATGCTGTTAAGAGCATT
GCACCGGAATTGCAGGCTGATGAGGGGGCTGAGTATGATAATGTTATTGA
GCTCGATTTGTCCACTCTCGAGCCACGGATCAATGGACCTTTCACGCCGG
ACTTTTCTACCCCGGTGTCGCGGTTCGGTGAAGCCGTGGCGGAGAACCAG
TGGCCGGTTGAATTGACGGCAGCTTTGATTGGATCTTGTACTAACTCTTC
GTTTGAAGATATGGGACGTGCAGCTAGTCTTGCCCAGCAGGCATTGGATG
CAGGACTGGAACCACAAATGCCCCTTCTGGTGTCGCCAGGTAGTGTTCAG
ACGCGCGAGACGTTGGAAGATGCCGGTATTCTGCCGGTCTTCGAGAGACT
CGGGGCGACGATGCTTCCCAACGCCTGTGGTCCATGCTGTGGGTCGTGGG
ATCGAGTTGATATGCCAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0003994aconitate hydratase activity
GO:00515394 iron, 4 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130186ASPNIDRAFT_130186Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130186-T1ASPNIDRAFT_130186-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130186-T1.cdsASPNIDRAFT_130186-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130186-T1.utr3p1ASPNIDRAFT_130186-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130186-T1.exon2ASPNIDRAFT_130186-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_130186-T1.exon1ASPNIDRAFT_130186-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.8
DBxrefInterPro:IPR036008
DBxrefInterPro:IPR018136
DBxrefInterPro:IPR006248
DBxrefInterPro:IPR015928
DBxrefInterPro:IPR015932
DBxrefInterPro:IPR000573
DBxrefInterPro:IPR015931
DBxrefInterPro:IPR001030
DBxrefPFAM:PF00694
DBxrefPFAM:PF00330
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2849835..2852049 -
Powered by Drupal