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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:3078802..3079344- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_143801-T1 ID=ASPNIDRAFT_143801-T1|Name=ASPNIDRAFT_143801-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=543bp|location=Sequence derived from alignment at ACJE01000010.1:3078802..3079344- (Aspergillus niger ATCC 1015)
TTCTACAGGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAA
CCCCAACACCAGGTACTTGCGATCCGCACCGATATCGATATAGAGGAACA
AGGGAATCTGACACATGGGTTATCTAGTCTGATCAAGATCGACGGTGTTG
AGAGCACCGAGGCCGCAAAGTGAGTAGCGAACGGGTTCGGAATGGGAATA
TCAGAACACACAGCTAAGACGACATTTTTTTACAGCTTCTACCTGGGCAA
GAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAACA
TCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGGTATGTGATGCTCA
GCTCCAATGCGCGATGATTACGATGGAATATTTCAATACTATCGGTGATT
GTTGGAACCGAGAACGGCGGGAAACTAACGATATTTCCTCATGAACAGGT
AACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAGAC
CTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATC back to topCoding sequence (CDS) from alignment at ACJE01000010.1:3078802..3079344- >ASPNIDRAFT_143801-T1 ID=ASPNIDRAFT_143801-T1|Name=ASPNIDRAFT_143801-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1200bp|location=Sequence derived from alignment at ACJE01000010.1:3078802..3079344- (Aspergillus niger ATCC 1015)
GTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAG
ACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCCTTCT
ACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGG
GGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTCTG
ATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAATTCTACAGGGGT
CGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAG
GTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAG
ACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCCTTCT
ACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGG
GGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTCTG
ATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAATTCTACAGGGGT
CGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAG
GTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAG
ACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCCTTCT
ACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGG
GGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTCTG
ATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAATTCTACAGGGGT
CGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAG
GTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAG
ACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCCTTCT
ACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGG
GGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTCTG
ATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAATTCTACAGGGGT
CGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009000 |
| DBxref | InterPro:IPR018266 |
| DBxref | InterPro:IPR038661 |
| DBxref | InterPro:IPR001780 |
| DBxref | PFAM:PF01247 |
| Product | 60S ribosomal protein L33B |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:3078802..3079344 - |
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