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ASPNIDRAFT_52431-T1, ASPNIDRAFT_52431-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52431-T1
Unique NameASPNIDRAFT_52431-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3117061..3118985+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52431-T1 ID=ASPNIDRAFT_52431-T1|Name=ASPNIDRAFT_52431-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1925bp|location=Sequence derived from alignment at ACJE01000010.1:3117061..3118985+ (Aspergillus niger ATCC 1015)
ATGAAGGCGGAGGTGCTGAGGGAAGCGGAGGGGGAGGGGGAGGCCATCTT
TCTTGTTTCTGCTTTGAATCGATGGTATAGTTGAGGAGTTGTAGTGGAAG
CTAAAAGGAGGAATAATCAAGCAGGGCCTGCCACTGCCTTGACGAATGTT
ATGGCATAGATAATAATCAATCAAGAGGATGAAGCTATACACACACTAGC
TAGTTCGGTGAACCTAGTTATGGTCTGATGTAATCCAGGGGAGACACAGA
CAGACCGAGAGAGGGAGATCTCACGTGCCAGGATCACAATACCGGACGGT
AATGGCAATACGAATTTGACTCATTAGAGTCACGTGTCGGGAGCCCGCGA
TAACAGCGATTCTTTGCCATCGAGTCAGCGCAACAACCAAACTTCGAGAT
TCAACCAGCTCAAACCACAATCCCTAGAGCAATTTCCTTCATCTCTCGCG
AACGCAACAATCAAGCTACCGGAATATATTGTCCTGGTGGGAAGTTGAGA
AACGCTCATTCTCTCAGATAATTAAAAGGGCCAGCCCAAATATGGCGGAG
ACTGTACGTCACACCCCCGTTTTCCCTTTACCGATAGGTTTCCCTCCCAC
ATTTTCTTCATCACATTTCGCCGTGGGACCATCGACTCCCTCCGCTTTTG
CTTTCTTGAAGCACCACCTCAACCCCCGTGTTCTTTTCCCTCTATACCCA
TTACCTGTTGTGCAACGCTCGGACGCGATTTTTGCGGATCGAGCTTCACA
CTGGTCGACTGTCTTTTAGTGTGTCCCAGCGGTTTTTTTGGGTTTTTAAT
TTCGCCCCTCCCGCTAACGTGTGTTTGGGCTGGTCCGGATTAGCAGGTTG
AACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGAAGGCGCT
GTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGA
GAAGCCGGTTGCTGAGACTGAGGGTATATACCTTTCTCCCCTCTCGACTT
GTGGATATCAAATTTGATATTGACCTCTACGCATCACCTACAGACAAGGC
CGTCGACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGA
GCAAGAAGCCCAAGGACACCGAGGGCGATGACGAGACCCCCGCCGCCGAC
GGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAA
GGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAG
AGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGA
GACCACGAAGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCAACCCAT
CCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACC
ACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCC
CAGTGTCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGA
TATCTGCAAGCGCATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGT
TCGCCGAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTT
ATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATA
CATCGGTATGTTGCTTTGCTATATGGTTATTTTTCAAATCAATAACGACA
CTAACGTTGTATAGTCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCG
ACACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTGCAAC
TCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGG
ACAGGTCGGCCGCAGAAAGAGACAGGGTTAAGTGGGTTAATGGGAGTTTT
GTCAAAGGGGGAGAAGGATCCATGG
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Coding sequence (CDS) from alignment at ACJE01000010.1:3117061..3118985+

>ASPNIDRAFT_52431-T1 ID=ASPNIDRAFT_52431-T1|Name=ASPNIDRAFT_52431-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5160bp|location=Sequence derived from alignment at ACJE01000010.1:3117061..3118985+ (Aspergillus niger ATCC 1015)
ATGAAGGCGGAGGTGCTGAGGGAAGCGGAGGGGGAGGGGGAGGCCATCTT
TCTTGTTTCTGCTTTGAATCGATGTGTGTCCCAGCGGTTTTTTTGGGTTT
TTAATTTCGCCCCTCCCGCTAACCAGGTTGAACCCGCTCCCCAAAAACAA
CGCAAGTCGGTCGCATTCAGTGAAGGCGCTGTCATTATGGATACCAACGG
CGAAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTGCTGAGACTG
AGGACAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAA
AAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGAGACCCC
CGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGA
AGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCC
GGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGT
CCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACGACGCCG
CGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATT
CAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTATAAGAT
CCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCA
ACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCACGTTATG
CAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCG
TCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCT
TGAGAAGATACATCGTCGAATACGTCACCTGCAAGACCTGCCGCAGTCCC
GACACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTGCAA
CTCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTG
GACAGGTCGGCCGCAGAAAGAGACAGGGTTAAATGAAGGCGGAGGTGCTG
AGGGAAGCGGAGGGGGAGGGGGAGGCCATCTTTCTTGTTTCTGCTTTGAA
TCGATGTGTGTCCCAGCGGTTTTTTTGGGTTTTTAATTTCGCCCCTCCCG
CTAACCAGGTTGAACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTC
AGTGAAGGCGCTGTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGC
TCCGGTTGTTGAGAAGCCGGTTGCTGAGACTGAGGACAAGGCCGTCGACG
AAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAG
CCCAAGGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGAGTT
CGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCGACG
CGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAA
GGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCACGA
AGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGTACT
CGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCCGAT
CTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTGTCT
GCGTGAAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCTGCA
AGCGCATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCCGAA
TTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAAGGG
TCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCGTCG
AATACGTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAACAAG
GGTGAGAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCGTCG
TTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCAGAA
AGAGACAGGGTTAAATGAAGGCGGAGGTGCTGAGGGAAGCGGAGGGGGAG
GGGGAGGCCATCTTTCTTGTTTCTGCTTTGAATCGATGTGTGTCCCAGCG
GTTTTTTTGGGTTTTTAATTTCGCCCCTCCCGCTAACCAGGTTGAACCCG
CTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGAAGGCGCTGTCATT
ATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCC
GGTTGCTGAGACTGAGGACAAGGCCGTCGACGAAGTTACCGAACTCTTCA
AGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGC
GATGACGAGACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAA
GAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCA
AGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAG
AAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTG
GGCTCACGACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGAT
TCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACC
AAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCG
TACGATTTTCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCG
ATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGT
GTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCA
GATTGAGAACGTCTTGAGAAGATACATCGTCGAATACGTCACCTGCAAGA
CCTGCCGCAGTCCCGACACCGAGCTCAACAAGGGTGAGAACCGTCTATAC
TTCGTCACCTGCAACTCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAA
GACCGGTTTCCGTGGACAGGTCGGCCGCAGAAAGAGACAGGGTTAAATGA
AGGCGGAGGTGCTGAGGGAAGCGGAGGGGGAGGGGGAGGCCATCTTTCTT
GTTTCTGCTTTGAATCGATGTGTGTCCCAGCGGTTTTTTTGGGTTTTTAA
TTTCGCCCCTCCCGCTAACCAGGTTGAACCCGCTCCCCAAAAACAACGCA
AGTCGGTCGCATTCAGTGAAGGCGCTGTCATTATGGATACCAACGGCGAA
GTGACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTGCTGAGACTGAGGA
CAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGA
AGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGAGACCCCCGCC
GCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCC
GAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTG
TTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCC
GAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCA
ACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGA
GCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCG
CCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAACAT
TGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCACGTTATGCAGT
TCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGT
CTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAG
AAGATACATCGTCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGACA
CCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACTCT
TGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACA
GGTCGGCCGCAGAAAGAGACAGGGTTAAATGAAGGCGGAGGTGCTGAGGG
AAGCGGAGGGGGAGGGGGAGGCCATCTTTCTTGTTTCTGCTTTGAATCGA
TGTGTGTCCCAGCGGTTTTTTTGGGTTTTTAATTTCGCCCCTCCCGCTAA
CCAGGTTGAACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTG
AAGGCGCTGTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCG
GTTGTTGAGAAGCCGGTTGCTGAGACTGAGGACAAGGCCGTCGACGAAGT
TACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCA
AGGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGAGTTCGAC
CCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGG
CGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTG
CCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCT
GGAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGTACTCGCT
GCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGT
TGTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGT
GAAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCTGCAAGCG
CATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGG
GTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGT
TTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCGTCGAATA
CGTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAACAAGGGTG
AGAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCGTCGTTCC
GTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCAGAAAGAG
ACAGGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52431ASPNIDRAFT_52431Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52431-T1ASPNIDRAFT_52431-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52431-T1.exon1ASPNIDRAFT_52431-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52431-T1.exon2ASPNIDRAFT_52431-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52431-T1.exon3ASPNIDRAFT_52431-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52431-T1.exon4ASPNIDRAFT_52431-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52431-T1.exon5ASPNIDRAFT_52431-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52431-T1.cdsASPNIDRAFT_52431-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52431-T1.utr3p1ASPNIDRAFT_52431-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264OQ8
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR000048
DBxrefInterPro:IPR002735
DBxrefPFAM:PF01873
Product beta subunit
Productputative translation initiation factor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3117061..3118985 +
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