You are here

Home

ASPNIDRAFT_54900-T1, ASPNIDRAFT_54900-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54900-T1
Unique NameASPNIDRAFT_54900-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:590424..592418+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54900-T1 ID=ASPNIDRAFT_54900-T1|Name=ASPNIDRAFT_54900-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1995bp|location=Sequence derived from alignment at ACJE01000012.1:590424..592418+ (Aspergillus niger ATCC 1015)
ATGGTGCTCGCCAAATCCAAGAACTCCGTCGGGCTGGGCAACAGCCTGAT
GAACGACCGTTTCGGCAAAGGCAAGGCCTCCTCCATGAAAAAGGCCTCGC
ACAATGCCGGCATTGCCCGCAAGAACGAAAAGGGCGAGACCTACATCACC
AACGCTCCCACCGAAGCTGCCTGGGTGAAGATGCGCAGTATTACCGAGCA
GGCTGCCCTCGATGAGTTCCTCAGTACCGCCGAACTGGCCGGCACCGATT
TCACCGCCGAGAAGATGAACAACGTCAAGATCATCCACACCGACCAGAAG
AATCCCTACCTGCTGTCCGCTGCCGAAGAGAAGTCCGCCGTGAAGAAGCA
CAAGCAGAACAAGAACCGTCTTACCGTTCCCCGTCGGCCCAAGTGGGACC
AGTCCACCACCCGTCAGCAACTGGAGCTGATGGAGCGCGAGAGTTTCCTG
AACTGGCGTCGTGGCCTGGCCGAGTTGCAGGAGAACCAGGATCTGTTGAT
GACTCCTTTCGAGCGCAACTTGGAGGTCTGGCGCCAGCTGTGGCGTGTTA
TTGAACGTTCCGATTTGGTGGTCCAGATTGTCGATGCCCGTAACCCGCTG
CTCTACCGCTCTGAGGATCTGGAAAGCTACGTCAAGGAGATCGACCCCAA
GAAGCAAAACCTGCTGCTTGTCAACAAGGCCGACATGCTGACTGAGGCCC
AACGTGCCATGTGGGCTGACCACTTTGAGCGCCAGAACATCAGCTTCCGT
TTCTTCTCCGCCCATCTGGCCAAGGAGCGCAACGAACGCCTCCAGCAGGG
TCTTGATTCGGAGGACGAAAGCGAAGAGGACATTCCCGAGGAGGAGCAGT
TGGCTGAGGGTGCCAAGTCTCTGGACATTAAGGACGGCGAAGAGCCTCAA
GAAGAGCACGACGGTGGTCTTGAACTCAACCCCAGCGCCAGCTCCAGCTC
TTCCCGACGCACAGAGATTCTTGACGTCGAAGAACTGGAAGAGCTCTTCC
TTTCCAATACCCCCGAAACTCTTCCCGACAACGACTCGCCCGAGGGGCCG
GTCAAGAAGAAGACGACCATCGGTCTGGTCGGATACCCCAACGTCGGTAA
ATCCAGCACGATCAACGCCCTGCTCGGTGCCAAGAAGGTCTCCGTTTCCG
CCACCCCCGGTAAGACCAAGCACTTCCAGACTCTTTACCTGTCTCCCGAG
ATCATGCTTTGCGATTGTCCCGGTCTCGTCTTCCCCAACTTTGCCACCAC
CAAGGCTGAGCTGGTCGTCAACGGTGTGCTCCCCATCGACCAGCAGCGCG
AGTTTACCGGCCCGGCCGCCCTCGTCGCCCAGCGCATTCCCAAGCACTTT
GTCGAGAACGTCTACGGCGTGAAGATCAACACCCGCCCCATCGAAGAAGG
AGGAACTGGCATCCCCACTTCCCACGAACTTCTTCGCGCCTATGCCCGCG
CCCGTGGCTTCGCCACCACCGGCCAGGGTCAGCCCGACGAGTCGCGCGCG
GCTCGTTACATTCTCAAGGACTACGTCAACGGAAAGCTCCTCTTCTGCCA
CCCGCCGCCCACGCCCGAAGGCTCCGACCCCATTGACCCTATTGAATTCA
ACAAAGACCTCTACGACATGGCTCACCTACCGGCCCGGCGACAAGCGCAA
CTCGCCAAAATGCTCCAGAACGAGGAGGTCACAGACCCGGAACTGCTCGC
TCTCCTCAAGCCGGTCGAGAAGGGCGCGCGATCCCGCAACCTCGACTCGG
GTTTCTTCGGCCCCGGCGCCAAGTCCTCCACCGGCCGTCTCACCCTTCCT
TTCAATGCCCAGTACACGGAGCAGGGCCAGGAGATGCGCAAGCAGCTGAC
AGGTCGTAAGGAGCGCATGATGGTTGCTTTGGAGCGCGGAGTCGATGTAT
CGGAGGTGAAGAGCGGTTCGTCGAAGAAGCATTTCAAGGCGAATAAGCGG
CGGGCTAAGAAGGTGCGCAAGAATGCGGCGGATGAGGATTATTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:590424..592418+

>ASPNIDRAFT_54900-T1 ID=ASPNIDRAFT_54900-T1|Name=ASPNIDRAFT_54900-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1995bp|location=Sequence derived from alignment at ACJE01000012.1:590424..592418+ (Aspergillus niger ATCC 1015)
ATGGTGCTCGCCAAATCCAAGAACTCCGTCGGGCTGGGCAACAGCCTGAT
GAACGACCGTTTCGGCAAAGGCAAGGCCTCCTCCATGAAAAAGGCCTCGC
ACAATGCCGGCATTGCCCGCAAGAACGAAAAGGGCGAGACCTACATCACC
AACGCTCCCACCGAAGCTGCCTGGGTGAAGATGCGCAGTATTACCGAGCA
GGCTGCCCTCGATGAGTTCCTCAGTACCGCCGAACTGGCCGGCACCGATT
TCACCGCCGAGAAGATGAACAACGTCAAGATCATCCACACCGACCAGAAG
AATCCCTACCTGCTGTCCGCTGCCGAAGAGAAGTCCGCCGTGAAGAAGCA
CAAGCAGAACAAGAACCGTCTTACCGTTCCCCGTCGGCCCAAGTGGGACC
AGTCCACCACCCGTCAGCAACTGGAGCTGATGGAGCGCGAGAGTTTCCTG
AACTGGCGTCGTGGCCTGGCCGAGTTGCAGGAGAACCAGGATCTGTTGAT
GACTCCTTTCGAGCGCAACTTGGAGGTCTGGCGCCAGCTGTGGCGTGTTA
TTGAACGTTCCGATTTGGTGGTCCAGATTGTCGATGCCCGTAACCCGCTG
CTCTACCGCTCTGAGGATCTGGAAAGCTACGTCAAGGAGATCGACCCCAA
GAAGCAAAACCTGCTGCTTGTCAACAAGGCCGACATGCTGACTGAGGCCC
AACGTGCCATGTGGGCTGACCACTTTGAGCGCCAGAACATCAGCTTCCGT
TTCTTCTCCGCCCATCTGGCCAAGGAGCGCAACGAACGCCTCCAGCAGGG
TCTTGATTCGGAGGACGAAAGCGAAGAGGACATTCCCGAGGAGGAGCAGT
TGGCTGAGGGTGCCAAGTCTCTGGACATTAAGGACGGCGAAGAGCCTCAA
GAAGAGCACGACGGTGGTCTTGAACTCAACCCCAGCGCCAGCTCCAGCTC
TTCCCGACGCACAGAGATTCTTGACGTCGAAGAACTGGAAGAGCTCTTCC
TTTCCAATACCCCCGAAACTCTTCCCGACAACGACTCGCCCGAGGGGCCG
GTCAAGAAGAAGACGACCATCGGTCTGGTCGGATACCCCAACGTCGGTAA
ATCCAGCACGATCAACGCCCTGCTCGGTGCCAAGAAGGTCTCCGTTTCCG
CCACCCCCGGTAAGACCAAGCACTTCCAGACTCTTTACCTGTCTCCCGAG
ATCATGCTTTGCGATTGTCCCGGTCTCGTCTTCCCCAACTTTGCCACCAC
CAAGGCTGAGCTGGTCGTCAACGGTGTGCTCCCCATCGACCAGCAGCGCG
AGTTTACCGGCCCGGCCGCCCTCGTCGCCCAGCGCATTCCCAAGCACTTT
GTCGAGAACGTCTACGGCGTGAAGATCAACACCCGCCCCATCGAAGAAGG
AGGAACTGGCATCCCCACTTCCCACGAACTTCTTCGCGCCTATGCCCGCG
CCCGTGGCTTCGCCACCACCGGCCAGGGTCAGCCCGACGAGTCGCGCGCG
GCTCGTTACATTCTCAAGGACTACGTCAACGGAAAGCTCCTCTTCTGCCA
CCCGCCGCCCACGCCCGAAGGCTCCGACCCCATTGACCCTATTGAATTCA
ACAAAGACCTCTACGACATGGCTCACCTACCGGCCCGGCGACAAGCGCAA
CTCGCCAAAATGCTCCAGAACGAGGAGGTCACAGACCCGGAACTGCTCGC
TCTCCTCAAGCCGGTCGAGAAGGGCGCGCGATCCCGCAACCTCGACTCGG
GTTTCTTCGGCCCCGGCGCCAAGTCCTCCACCGGCCGTCTCACCCTTCCT
TTCAATGCCCAGTACACGGAGCAGGGCCAGGAGATGCGCAAGCAGCTGAC
AGGTCGTAAGGAGCGCATGATGGTTGCTTTGGAGCGCGGAGTCGATGTAT
CGGAGGTGAAGAGCGGTTCGTCGAAGAAGCATTTCAAGGCGAATAAGCGG
CGGGCTAAGAAGGTGCGCAAGAATGCGGCGGATGAGGATTATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54900ASPNIDRAFT_54900Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54900-T1.exon1ASPNIDRAFT_54900-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54900-T1.cdsASPNIDRAFT_54900-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54900-T1ASPNIDRAFT_54900-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262I5I
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030378
DBxrefInterPro:IPR006073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:590424..592418 +
Powered by Drupal