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ASPNIDRAFT_127402-T1, ASPNIDRAFT_127402-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127402-T1
Unique NameASPNIDRAFT_127402-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1374618..1375347-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127402-T1 ID=ASPNIDRAFT_127402-T1|Name=ASPNIDRAFT_127402-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=730bp|location=Sequence derived from alignment at ACJE01000013.1:1374618..1375347- (Aspergillus niger ATCC 1015)
CGAGGGACGGGTAAGTTGAAGGAGCGAAAGACATCAGAACATCTTGGACG
GTTTTTCGAACATCCATCCAGCCAGCAACAAACCGCCAAAATGGGTCGCG
TCCGTACCAAGGTGAGCATACACGACCGCAATAATGAAGGAAAGAAAGAA
TATCAATTCTAACGAAAATGCGCGCGACAATAGACAGTCAAGCGTTCCGC
TAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGA
CCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTC
CGCAACAAGGTTAGTGATTACCATCTTTTTTCTCCCGGAAATTCCGGATA
TAATGGTCAAATGGCAATATACTAATAAGGAATTGGATTTAGATCGCTGG
TTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTA
TCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTACGTT
CCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCTCGA
CGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCGTAAGTTCTC
CCTTATGGAATCTACATTCATGATTTATATCATGTCTAACTCGATCGTGC
TTTAGTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAG
GCTCAGGAGCGCCCCCGCCGCTACCGGTAG
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Coding sequence (CDS) from alignment at ACJE01000013.1:1374618..1375347-

>ASPNIDRAFT_127402-T1 ID=ASPNIDRAFT_127402-T1|Name=ASPNIDRAFT_127402-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2040bp|location=Sequence derived from alignment at ACJE01000013.1:1374618..1375347- (Aspergillus niger ATCC 1015)
TTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCA
GGAGCGCCCCCGCCGCTACCGGTAGATCGCTGGTTACACCACCCACCTTA
TGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTATCTCCTTCAAGCTCCAG
GAGGAGGAGCGTGAGCGCAAGGATCAGTACGTTCCTGAGGTCTCCGCTCT
GGATGTTTCCCAGACCGAGTCCGGCCAGCTCGACGTCGACTCTGAGACCA
AGGACCTGCTCAAGAGCATGGGCACAGTCAAGCGTTCCGCTAAGGTCGTT
ATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCG
TATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGC
GAGGGACGGGTAAGTTGAAGGAGCGAAAGACATCAGAACATCTTGGACGG
TTTTTCGAACATCCATCCAGCCAGCAACAAACCGCCAAAATGGGTCGCGT
CCGTACCAAGTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGC
AGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGATCGCTGGTTACACC
ACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTATCTCCTT
CAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTACGTTCCTGAGG
TCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCTCGACGTCGAC
TCTGAGACCAAGGACCTGCTCAAGAGCATGGGCACAGTCAAGCGTTCCGC
TAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGA
CCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTC
CGCAACAAGCGAGGGACGGGTAAGTTGAAGGAGCGAAAGACATCAGAACA
TCTTGGACGGTTTTTCGAACATCCATCCAGCCAGCAACAAACCGCCAAAA
TGGGTCGCGTCCGTACCAAGTTCGACAACCTCAAGGTCAACGTCATCCCC
GTCTCCCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGATCGC
TGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCG
GTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTAC
GTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCT
CGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCACAGTCA
AGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTC
GACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTC
CAAGCGTCTCCGCAACAAGCGAGGGACGGGTAAGTTGAAGGAGCGAAAGA
CATCAGAACATCTTGGACGGTTTTTCGAACATCCATCCAGCCAGCAACAA
ACCGCCAAAATGGGTCGCGTCCGTACCAAGTTCGACAACCTCAAGGTCAA
CGTCATCCCCGTCTCCCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACC
GGTAGATCGCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGC
CCTGTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAA
GGATCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGT
CCGGCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATG
GGCACAGTCAAGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAA
GTTGACGCTCGACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTA
TCATTGCCTCCAAGCGTCTCCGCAACAAGCGAGGGACGGGTAAGTTGAAG
GAGCGAAAGACATCAGAACATCTTGGACGGTTTTTCGAACATCCATCCAG
CCAGCAACAAACCGCCAAAATGGGTCGCGTCCGTACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS17ASPNIDRAFT_127402Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127402-T1ASPNIDRAFT_127402-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127402-T1.cdsASPNIDRAFT_127402-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127402-T1.exon4ASPNIDRAFT_127402-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127402-T1.exon3ASPNIDRAFT_127402-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127402-T1.exon2ASPNIDRAFT_127402-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127402-T1.exon1ASPNIDRAFT_127402-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR018273
DBxrefInterPro:IPR001210
DBxrefInterPro:IPR036401
DBxrefPFAM:PF00833
Product40S ribosomal protein S17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1374618..1375347 -
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