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ASPNIDRAFT_126136-T1, ASPNIDRAFT_126136-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_126136-T1
Unique NameASPNIDRAFT_126136-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1497626..1498934-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_126136-T1 ID=ASPNIDRAFT_126136-T1|Name=ASPNIDRAFT_126136-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1309bp|location=Sequence derived from alignment at ACJE01000013.1:1497626..1498934- (Aspergillus niger ATCC 1015)
GCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCTCTCCCCCC
GCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGTCTCCTACC
GATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGATCAAAACG
ACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGGAGGTCCTG
GGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTCGTTCGATA
CGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCAACTGGAAG
CTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGTGTGAA
GGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGCGAGC
ACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTGTCGACGAG
CCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCTGCTGGCGC
TTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCGGAAGGGTG
CTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGGATGATTTG
GCGACTCTGAGAGTTACGAACGTGAGTTTTCCCATCCCCTCCTTGTTTTG
ATTTACTGTTCTGTGTTTGGCTATTTGCTGGTCTCCCCGGAGGGGTTGGG
GGAGGGGTCGAGGGACAGGGGATGCTAGTTTTCCTCTTTCTGTCTCTTTC
TCTCCTCCTTTCCCTTGCCTGCTCTGCCCTCCCTTTGCCCTCTAAACACT
CCTATTGGTGTCGTTCAGAGGGAGAAAGAAAGAGGCAGCAGCCCTTTCGG
GCAGACACATGGATGTCATGAGAACAGCAATCAGCTTCCTCTAATTTCCT
TGCTTCTATTGCATTTGCTTCCCACGGACACATCACTGACTGACAATAAA
CCCAAACAGGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTT
CGAACGCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAA
CCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGAT
GCTGCACGTGCTTGCGAGAAGATGGATGGCTGTAAGTTATCCCTCCCGGT
TACGTTTCCATTTTTCGTCATATTCTGTTTTGTTTTTTTCCGCCATCGTT
GCAATGTCAGCAGCAAAGCAAGTTATCGGAATCGCAACTAACATTTCCTC
TTCATCTAGTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAG
CGTGCCACT
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Coding sequence (CDS) from alignment at ACJE01000013.1:1497626..1498934-

>ASPNIDRAFT_126136-T1 ID=ASPNIDRAFT_126136-T1|Name=ASPNIDRAFT_126136-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2529bp|location=Sequence derived from alignment at ACJE01000013.1:1497626..1498934- (Aspergillus niger ATCC 1015)
TCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACT
GTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTT
CGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAG
CCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGT
GCTTGCGAGAAGATGGATGGCTGCCGACTGGGCCGACGACGAGGAGTTCG
ACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGC
ACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAA
GGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGC
AGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAAC
GCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTT
CCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACG
GTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAG
TGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGA
TACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATG
AGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTG
CCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGG
CAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACTCGGTTA
CCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTGTGAGCG
AGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGT
GTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGG
CTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCG
AGAAGATGGATGGCTGCCGACTGGGCCGACGACGAGGAGTTCGACGACCC
CTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGA
CGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACC
CGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGC
GGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCG
GACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCC
AGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGA
GAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTA
TTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATG
GCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTC
TCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTC
ATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTAT
GAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACTCGGTTACCGTCAC
CTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTGTGAGCGAGTTGGC
AGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACCA
GAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCT
TTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGAT
GGATGGCTGCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCT
CTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGT
CTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGA
TCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGG
AGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTC
GTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCA
ACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGC
AGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAG
TGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTG
TCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCT
GCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCG
GAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGG
ATGATTTGGCGACTCTGAGAGTTACGAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF35ASPNIDRAFT_126136Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126136-T1ASPNIDRAFT_126136-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126136-T1.cdsASPNIDRAFT_126136-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126136-T1.exon3ASPNIDRAFT_126136-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126136-T1.exon2ASPNIDRAFT_126136-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126136-T1.exon1ASPNIDRAFT_126136-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG0926489S
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034240
DBxrefInterPro:IPR017334
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR024675
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF12353
Producttranslation initiation factor eIF3 subunit g
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1497626..1498934 -
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