You are here

Home

ASPNIDRAFT_55072-T1, ASPNIDRAFT_55072-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55072-T1
Unique NameASPNIDRAFT_55072-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000014.1:311485..313053-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55072-T1 ID=ASPNIDRAFT_55072-T1|Name=ASPNIDRAFT_55072-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1569bp|location=Sequence derived from alignment at ACJE01000014.1:311485..313053- (Aspergillus niger ATCC 1015)
ATGGAAACTAAAAGACGAAGACACTACGCCCCAAGATCCCGCACCGGATG
TCGGACCTGTCGGACGAGAAGAGTCAAATGCGATGAGGCTCCTGGAGCGT
GCAAGAACTGCACCTCCACCGGACGGACTTGTGATGGGTACGACTTGACC
AGACTCCCAAATGTCGCCGGGTATTTGCTCAATGCTAGTCCCCCAAAGTT
TCAGCTTCGAATCAGTCTCCCTGGAATGAGTTCAGATGAGCGCCGGTGCT
TTACCTACTTCCAAACACACACTGTGCCTAGGATGGTGGGGTTCTATGAT
TCGGAGCTTTGGCAGCGACTGGCACTCCAGATGAGCCAAGCCGAAACCGC
TGTCTGCCATGCGGTCGTTGCTCTGGGGGCCCTGCATCAAGACTCAGAAG
CTAGAGGAACGACGCTGCAGAAAGTTGACCTGGATCGTAATGATCACCAT
CGCTTCGCCCTCGAGCAATACAGCAGGGCCATTACTGCCCTACAAAAACG
CCTGCCGTCAAACGATCCGCAGGTGCGCCTGGCTGTGCTAATGTGCTGTG
TCGCGTTCATTTTCTTCGAATACCTTCAAGGCAATCGGGGGAAAGCGTTC
ACTCATCTTCAGAATGGGCTTCATGTTTTGGCGAACCGTAAGGGGGACGA
GGCACGTACCCTTGTACTGTCAAAAGTCCTCCAGCCGGTCCAAGAATCTA
CTGCCGAAAGGGCATTTCTGCGAGCGTTCGCGCAGCTGGATGCTCAATCC
GCGCACTTCAGAGTATCTGGCTCCGTTACTACTTTGGGGGCACAGAATGG
CTATTTGACTACAGACATTCTCAACCAAGAATTCGACTTCCAAAGCTTGG
AGGACGTAAAAGACAAGTTAGATCCCCTGGGAAGTGTCGTCTTCCGCTTT
CGTACCACCTGTCGTCCATTGCTCCGAAATCCAATGGTCGACGTCCTGCA
ACTATCAGTCCAGCACCACAGGATACGGACTCAGCTAATGAAACATATCT
CAGCCTTTGAGACATTCAGCGCACAATTTCATCCATCCAAGATGACCGCC
AAGGAAGCACGCAGCATGGACATGATAAGGCTTCACCATATCGTCTTGAT
GGTGGATCTGGAAACTATGCTCAGCCTGTCAGAGCTCGTATATGACTCTT
ATCTACCACAATTCCGAACATTCGTGAACTTTTGTGAGCGCATCATAAAC
AGCATGAGGGCAGAGTACGGCACGAATCTTACCAAGATAGTGACCGACAT
GGGCGTCATTGCTCCACTAAGCTGGACAAGTCTCCGGTGTCGAGATCTCC
CAACTCGACAGCGAGCATTAAGTCTACTTGATTCTTGGCCCCACTGCGAA
GGGCCGTATGACTCTCGATTCTTCGCTACTCTGGCACGTCAGGTAGTTGC
AATCGAGAGCGAGGGCGAGATAGCCGGCTTCATTCCAGAACATGCTCGTG
TGCGCGATACGTCTCTGGAGATGTTAGGGGATGGACTCCATGCAGTGCTA
TTGTATACGTTATCGGACCCGAACAAGATGAATCTCGAAATGCATCGACG
GCCGTTTCGCTTCCGATGA
back to top

Coding sequence (CDS) from alignment at ACJE01000014.1:311485..313053-

>ASPNIDRAFT_55072-T1 ID=ASPNIDRAFT_55072-T1|Name=ASPNIDRAFT_55072-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1569bp|location=Sequence derived from alignment at ACJE01000014.1:311485..313053- (Aspergillus niger ATCC 1015)
ATGGAAACTAAAAGACGAAGACACTACGCCCCAAGATCCCGCACCGGATG
TCGGACCTGTCGGACGAGAAGAGTCAAATGCGATGAGGCTCCTGGAGCGT
GCAAGAACTGCACCTCCACCGGACGGACTTGTGATGGGTACGACTTGACC
AGACTCCCAAATGTCGCCGGGTATTTGCTCAATGCTAGTCCCCCAAAGTT
TCAGCTTCGAATCAGTCTCCCTGGAATGAGTTCAGATGAGCGCCGGTGCT
TTACCTACTTCCAAACACACACTGTGCCTAGGATGGTGGGGTTCTATGAT
TCGGAGCTTTGGCAGCGACTGGCACTCCAGATGAGCCAAGCCGAAACCGC
TGTCTGCCATGCGGTCGTTGCTCTGGGGGCCCTGCATCAAGACTCAGAAG
CTAGAGGAACGACGCTGCAGAAAGTTGACCTGGATCGTAATGATCACCAT
CGCTTCGCCCTCGAGCAATACAGCAGGGCCATTACTGCCCTACAAAAACG
CCTGCCGTCAAACGATCCGCAGGTGCGCCTGGCTGTGCTAATGTGCTGTG
TCGCGTTCATTTTCTTCGAATACCTTCAAGGCAATCGGGGGAAAGCGTTC
ACTCATCTTCAGAATGGGCTTCATGTTTTGGCGAACCGTAAGGGGGACGA
GGCACGTACCCTTGTACTGTCAAAAGTCCTCCAGCCGGTCCAAGAATCTA
CTGCCGAAAGGGCATTTCTGCGAGCGTTCGCGCAGCTGGATGCTCAATCC
GCGCACTTCAGAGTATCTGGCTCCGTTACTACTTTGGGGGCACAGAATGG
CTATTTGACTACAGACATTCTCAACCAAGAATTCGACTTCCAAAGCTTGG
AGGACGTAAAAGACAAGTTAGATCCCCTGGGAAGTGTCGTCTTCCGCTTT
CGTACCACCTGTCGTCCATTGCTCCGAAATCCAATGGTCGACGTCCTGCA
ACTATCAGTCCAGCACCACAGGATACGGACTCAGCTAATGAAACATATCT
CAGCCTTTGAGACATTCAGCGCACAATTTCATCCATCCAAGATGACCGCC
AAGGAAGCACGCAGCATGGACATGATAAGGCTTCACCATATCGTCTTGAT
GGTGGATCTGGAAACTATGCTCAGCCTGTCAGAGCTCGTATATGACTCTT
ATCTACCACAATTCCGAACATTCGTGAACTTTTGTGAGCGCATCATAAAC
AGCATGAGGGCAGAGTACGGCACGAATCTTACCAAGATAGTGACCGACAT
GGGCGTCATTGCTCCACTAAGCTGGACAAGTCTCCGGTGTCGAGATCTCC
CAACTCGACAGCGAGCATTAAGTCTACTTGATTCTTGGCCCCACTGCGAA
GGGCCGTATGACTCTCGATTCTTCGCTACTCTGGCACGTCAGGTAGTTGC
AATCGAGAGCGAGGGCGAGATAGCCGGCTTCATTCCAGAACATGCTCGTG
TGCGCGATACGTCTCTGGAGATGTTAGGGGATGGACTCCATGCAGTGCTA
TTGTATACGTTATCGGACCCGAACAAGATGAATCTCGAAATGCATCGACG
GCCGTTTCGCTTCCGATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55072ASPNIDRAFT_55072Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55072-T1.cdsASPNIDRAFT_55072-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55072-T1.exon1ASPNIDRAFT_55072-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55072-T1ASPNIDRAFT_55072-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000014.1supercontigACJE01000014.1:311485..313053 -
Powered by Drupal