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ASPNIDRAFT_44405-T1, ASPNIDRAFT_44405-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_44405-T1
Unique NameASPNIDRAFT_44405-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:800402..801601+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_44405-T1 ID=ASPNIDRAFT_44405-T1|Name=ASPNIDRAFT_44405-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1200bp|location=Sequence derived from alignment at ACJE01000015.1:800402..801601+ (Aspergillus niger ATCC 1015)
ATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATT
GCGGAGAATAGTACATACTATGATCACGGTTCCTCTAGTTCGGAGCTGAC
ACGATATTGAATCCAGGAAAACAATCGCCAGAAAGCCATAGCAATACGAG
AACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTCCTCC
ACCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATCCTCC
GGCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCA
TCAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTCCAAG
ATCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAA
CAAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACA
TGACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGA
GATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGAC
ACGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAAT
GGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTT
CCGGAGAAATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACTACCT
CCTGACCAATCGTGAGTATCCCCCTGCACAGGTTTGCGGCATGGTTTGCC
ACTGAGCGTTCGCTGACCACGGGCCCAACTGCAGCCGAACTTCAGGATGA
GGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGA
ATAACATGATGCTGTATCTACGGTATCAGGTGGAAGAGTACGCCTTTTCC
GCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACG
CGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTG
AAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAA
GGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACA
TGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGG
TCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA
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Coding sequence (CDS) from alignment at ACJE01000015.1:800402..801601+

>ASPNIDRAFT_44405-T1 ID=ASPNIDRAFT_44405-T1|Name=ASPNIDRAFT_44405-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3612bp|location=Sequence derived from alignment at ACJE01000015.1:800402..801601+ (Aspergillus niger ATCC 1015)
ATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATT
GCGGAGAATACAATACGAGAACAACGCGAAGCCGAACAAGCTCGAGCTCA
CAATGCTGATCCTTCCTCCACCAAAGATCACCGACACGAAGGGTGGGTTC
TTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATGTTCGGGATGA
GAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAATGGGAGCGAC
AACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACCCTTCGAACCG
GGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGTGCCGAGAGTG
TGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTCCGGTGCTGTG
TCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAGTCTACTTACC
AAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCGAACTTCAGGA
TGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACGT
GGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGAGTACGCCTTT
TCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCG
ACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAAC
TTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCGG
CAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACG
ACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTG
GGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTC
TAAATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCA
ATTGCGGAGAATACAATACGAGAACAACGCGAAGCCGAACAAGCTCGAGC
TCACAATGCTGATCCTTCCTCCACCAAAGATCACCGACACGAAGGGTGGG
TTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATGTTCGGGA
TGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAATGGGAGC
GACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACCCTTCGAA
CCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGTGCCGAGA
GTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTCCGGTGCT
GTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAGTCTACTT
ACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCGAACTTCA
GGATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAATCAA
CGTGGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGAGTACGCC
TTTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGA
GCGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCA
AACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGTAGC
CGGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGG
ACGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGA
TTGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAG
TTCTAAATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGA
GCAATTGCGGAGAATACAATACGAGAACAACGCGAAGCCGAACAAGCTCG
AGCTCACAATGCTGATCCTTCCTCCACCAAAGATCACCGACACGAAGGGT
GGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATGTTCG
GGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAATGGG
AGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACCCTTC
GAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGTGCCG
AGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTCCGGT
GCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAGTCTA
CTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCGAACT
TCAGGATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATAAAT
CAACGTGGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGAGTAC
GCCTTTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGAGTT
TGAGCGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGA
GCAAACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGACGT
AGCCGGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGGTGG
TGGACGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGACGG
GGATTGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAACTC
GAGTTCTAAATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCC
AGAGCAATTGCGGAGAATACAATACGAGAACAACGCGAAGCCGAACAAGC
TCGAGCTCACAATGCTGATCCTTCCTCCACCAAAGATCACCGACACGAAG
GGTGGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATGT
TCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAAT
GGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACCC
TTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGTG
CCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTCC
GGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAGT
CTACTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCGA
ACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCATA
AATCAACGTGGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGAG
TACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGGA
GTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTCA
AGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCGA
CGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGGG
TGGTGGACGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAGA
CGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGAA
CTCGAGTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44405ASPNIDRAFT_44405Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44405-T1.exon1ASPNIDRAFT_44405-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_44405-T1.exon2ASPNIDRAFT_44405-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_44405-T1.exon3ASPNIDRAFT_44405-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_44405-T1.exon4ASPNIDRAFT_44405-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44405-T1.cdsASPNIDRAFT_44405-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44405-T1ASPNIDRAFT_44405-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092641G3
DBxrefInterPro:IPR009061
DBxrefInterPro:IPR037129
DBxrefInterPro:IPR022656
DBxrefInterPro:IPR000465
DBxrefPFAM:PF05181
ProductDNA excision repair protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:800402..801601 +
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