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ASPNIDRAFT_54662-T1, ASPNIDRAFT_54662-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54662-T1
Unique NameASPNIDRAFT_54662-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:74106..76198-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54662-T1 ID=ASPNIDRAFT_54662-T1|Name=ASPNIDRAFT_54662-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2093bp|location=Sequence derived from alignment at ACJE01000016.1:74106..76198- (Aspergillus niger ATCC 1015)
CCCGCTTCAGGCGCTTCCTCCTCGCGCAGCGATACCTCGACCATAACACT
CTGAAATCATTGTTTTCGCTCCTCTGCTGTCAGCCCTTTCGTCGAGCGGA
TTGCACGCGGCCCTGTTCGCCGATCGACTTGCGCAGTGTCTGAAAGGGAC
ATGTCCCTGACCAGCTAAATGGCCAACATGTCCCCTCTCAGAGGTTACAT
CACATCATACCCGCCCCGTGTGCGCCAATATGGCAATGCGCTTCTCACCC
CGATTATCCCACCCAGCCAAGTTGGCCCGACTTCACGGACGACCAAGCGA
GGAACCGCCGCTATCAATTATGCGGAAGATGGTTACGACGATGAAGACTT
TGAGGACAGCGAGGGTCCTCGGCGGCCAACCGGGCTAAGGAGCCTTCGAC
GGGAAGAGTCAACGTTCGACAAGGTGCCACTGGCGGAGAAGCTGGGGAAA
GAGATACACGCCCCTGTTGAGGTCCAAGGGGTTTTTCGCGATTGGATGAT
CAAGAGAATGTTGCGACCAGCGTATGTGCCTCTCAACTTGATTCTTCAAG
CGATTCCAGTTTACCTCTGCGTCCTTTCTGCTTTTGCTATGATACTGACT
TGGAATCTTTTCTCCCTTTGTACAGTTGCGCCGATCAACTGCAAATCCAA
GCGCAGCTTCCTCTTACCCTTATACCTATCCGAATTGATTTGGAGGTCCC
AGCGCATCAGCCCCTAGAACCATTCCCTTTGCCGCGAACAGTCCTCGATC
CCAGTATCAACCCTACCTTGCCCGCCTACAGACGGCCGGAGGCGCTGCCT
GCCTATCGCATCAAAGACACGTTCCTTTGGAATCTTCACGAGGCTCTTGC
GACTCCCGAAGAGTTTGCCGTAGGATTCGTTCGCGATATGGACCTACCGA
ATCCCCAGGCCATGACGATGGCTATTAGCAACCAGATTCGTCAACAATTG
GAAGAATATGCCGGCGTTGCCCTGCATCCGTTATTCCAGAGTGTACAGCC
GAAGCCTCCAGTTCCGCAGATTGGCCTGTCGCGAGATGTGTCTGCTACAC
CGGTTTCCACCCACGCCGCGACGCCTGACAGCAGACCCAACCAAGTAACG
GTGACCAAAGAACCTCTCGTGAACGACAGCATACTAAACCCGGATGACGC
GTATCGGTGCATGATCAACCTAAATATCAACTTGCAAAACAAACTGTACA
CGGACAAGTTTGAATGGTCTCTATTGCATCCTCCGGGTATGGCGGAGGAG
TTTGCCAGAATTACGTGCGCGGACCTTGGTCTAGGTGGGGAATGGGTCGG
GGCCATTGCGCATGGCATCTACGAAGCCGCTCTGAAATTGAAGAAAGAAG
TATGCGAAAGTGGTGGACTCATCAGCGGCATGGGTGGTTATGGTAATGAG
ATCGACAATCAAGCTGCCAACGGCGCGGAGGCGGGCTGGCGTTACGATCC
CGAGGGACTAGGCGACGAATGGGAACCTAAGGTGGAAACGCTGTCAAAGG
AGGAAATTGAGAAGCGTGAGGGTGATCGCGAACGTCAGATTCGTCGTCTA
CGTCGAGAGACGGCCAGATTCTCCTCGACTGCGGGCATAACGCCCGACGC
CTCCCGACAGGGCAGTGGTTACTTTGACGTCGACAGTGAGACGCCGCTCG
GAAGAGGCGAGCGGAGCAAACGGAAGAGACGATTCCGCAGCCTGAGTCCC
TCGGGGAGAGGAGGAACCCCTGGAGGACGAGGGACTCCGGACACTGGTTC
AGGAGCTGGCTATGGTGGAGGTGGCGGTACACTTGCTGACTGGTTCGTTA
TGCCTATAAATTCTCTTCATAGAGCACATGCTGACCACCGCCTTTGCTCG
ATAGGGAGCGCCAAACTTGGAGATGCACCAACTGTATGGTTTGGGGTACG
GCGGTTTGGGCCGTACGAGATGGCCCAGCAGGTCCAAGAGTAAGATTATA
TGCCGTCTTTCGAAGTGACTACTTGCTGACTGCCACTGCGACAGACGCTC
TGCCACAACTGTGGTCTTTTGTACGAACGAGACAAGGTGGCCCCCGAATG
GTCCAGAGATCTACACCGTCACGATATGCCCATCGGCCGGTAG
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Coding sequence (CDS) from alignment at ACJE01000016.1:74106..76198-

>ASPNIDRAFT_54662-T1 ID=ASPNIDRAFT_54662-T1|Name=ASPNIDRAFT_54662-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6816bp|location=Sequence derived from alignment at ACJE01000016.1:74106..76198- (Aspergillus niger ATCC 1015)
ACGCTCTGCCACAACTGTGGTCTTTTGTACGAACGAGACAAGGTGGCCCC
CGAATGGTCCAGAGATCTACACCGTCACGATATGCCCATCGGCCGGTAGG
GAGCGCCAAACTTGGAGATGCACCAACTGTATGGTTTGGGGTACGGCGGT
TTGGGCCGTACGAGATGGCCCAGCAGGTCCAAGATTGCGCCGATCAACTG
CAAATCCAAGCGCAGCTTCCTCTTACCCTTATACCTATCCGAATTGATTT
GGAGGTCCCAGCGCATCAGCCCCTAGAACCATTCCCTTTGCCGCGAACAG
TCCTCGATCCCAGTATCAACCCTACCTTGCCCGCCTACAGACGGCCGGAG
GCGCTGCCTGCCTATCGCATCAAAGACACGTTCCTTTGGAATCTTCACGA
GGCTCTTGCGACTCCCGAAGAGTTTGCCGTAGGATTCGTTCGCGATATGG
ACCTACCGAATCCCCAGGCCATGACGATGGCTATTAGCAACCAGATTCGT
CAACAATTGGAAGAATATGCCGGCGTTGCCCTGCATCCGTTATTCCAGAG
TGTACAGCCGAAGCCTCCAGTTCCGCAGATTGGCCTGTCGCGAGATGTGT
CTGCTACACCGGTTTCCACCCACGCCGCGACGCCTGACAGCAGACCCAAC
CAAGTAACGGTGACCAAAGAACCTCTCGTGAACGACAGCATACTAAACCC
GGATGACGCGTATCGGTGCATGATCAACCTAAATATCAACTTGCAAAACA
AACTGTACACGGACAAGTTTGAATGGTCTCTATTGCATCCTCCGGGTATG
GCGGAGGAGTTTGCCAGAATTACGTGCGCGGACCTTGGTCTAGGTGGGGA
ATGGGTCGGGGCCATTGCGCATGGCATCTACGAAGCCGCTCTGAAATTGA
AGAAAGAAGTATGCGAAAGTGGTGGACTCATCAGCGGCATGGGTGGTTAT
GGTAATGAGATCGACAATCAAGCTGCCAACGGCGCGGAGGCGGGCTGGCG
TTACGATCCCGAGGGACTAGGCGACGAATGGGAACCTAAGGTGGAAACGC
TGTCAAAGGAGGAAATTGAGAAGCGTGAGGGTGATCGCGAACGTCAGATT
CGTCGTCTACGTCGAGAGACGGCCAGATTCTCCTCGACTGCGGGCATAAC
GCCCGACGCCTCCCGACAGGGCAGTGGTTACTTTGACGTCGACAGTGAGA
CGCCGCTCGGAAGAGGCGAGCGGAGCAAACGGAAGAGACGATTCCGCAGC
CTGAGTCCCTCGGGGAGAGGAGGAACCCCTGGAGGACGAGGGACTCCGGA
CACTGGTTCAGGAGCTGGCTATGGTGGAGGTGGCGGTACACTTGCTGACT
GATGGCCAACATGTCCCCTCTCAGAGGTTACATCACATCATACCCGCCCC
GTGTGCGCCAATATGGCAATGCGCTTCTCACCCCGATTATCCCACCCAGC
CAAGTTGGCCCGACTTCACGGACGACCAAGCGAGGAACCGCCGCTATCAA
TTATGCGGAAGATGGTTACGACGATGAAGACTTTGAGGACAGCGAGGGTC
CTCGGCGGCCAACCGGGCTAAGGAGCCTTCGACGGGAAGAGTCAACGTTC
GACAAGGTGCCACTGGCGGAGAAGCTGGGGAAAGAGATACACGCCCCTGT
TGAGGTCCAAGGGGTTTTTCGCGATTGGATGATCAAGAGAATGTTGCGAC
CAGCACGCTCTGCCACAACTGTGGTCTTTTGTACGAACGAGACAAGGTGG
CCCCCGAATGGTCCAGAGATCTACACCGTCACGATATGCCCATCGGCCGG
TAGGGAGCGCCAAACTTGGAGATGCACCAACTGTATGGTTTGGGGTACGG
CGGTTTGGGCCGTACGAGATGGCCCAGCAGGTCCAAGATTGCGCCGATCA
ACTGCAAATCCAAGCGCAGCTTCCTCTTACCCTTATACCTATCCGAATTG
ATTTGGAGGTCCCAGCGCATCAGCCCCTAGAACCATTCCCTTTGCCGCGA
ACAGTCCTCGATCCCAGTATCAACCCTACCTTGCCCGCCTACAGACGGCC
GGAGGCGCTGCCTGCCTATCGCATCAAAGACACGTTCCTTTGGAATCTTC
ACGAGGCTCTTGCGACTCCCGAAGAGTTTGCCGTAGGATTCGTTCGCGAT
ATGGACCTACCGAATCCCCAGGCCATGACGATGGCTATTAGCAACCAGAT
TCGTCAACAATTGGAAGAATATGCCGGCGTTGCCCTGCATCCGTTATTCC
AGAGTGTACAGCCGAAGCCTCCAGTTCCGCAGATTGGCCTGTCGCGAGAT
GTGTCTGCTACACCGGTTTCCACCCACGCCGCGACGCCTGACAGCAGACC
CAACCAAGTAACGGTGACCAAAGAACCTCTCGTGAACGACAGCATACTAA
ACCCGGATGACGCGTATCGGTGCATGATCAACCTAAATATCAACTTGCAA
AACAAACTGTACACGGACAAGTTTGAATGGTCTCTATTGCATCCTCCGGG
TATGGCGGAGGAGTTTGCCAGAATTACGTGCGCGGACCTTGGTCTAGGTG
GGGAATGGGTCGGGGCCATTGCGCATGGCATCTACGAAGCCGCTCTGAAA
TTGAAGAAAGAAGTATGCGAAAGTGGTGGACTCATCAGCGGCATGGGTGG
TTATGGTAATGAGATCGACAATCAAGCTGCCAACGGCGCGGAGGCGGGCT
GGCGTTACGATCCCGAGGGACTAGGCGACGAATGGGAACCTAAGGTGGAA
ACGCTGTCAAAGGAGGAAATTGAGAAGCGTGAGGGTGATCGCGAACGTCA
GATTCGTCGTCTACGTCGAGAGACGGCCAGATTCTCCTCGACTGCGGGCA
TAACGCCCGACGCCTCCCGACAGGGCAGTGGTTACTTTGACGTCGACAGT
GAGACGCCGCTCGGAAGAGGCGAGCGGAGCAAACGGAAGAGACGATTCCG
CAGCCTGAGTCCCTCGGGGAGAGGAGGAACCCCTGGAGGACGAGGGACTC
CGGACACTGGTTCAGGAGCTGGCTATGGTGGAGGTGGCGGTACACTTGCT
GACTGATGGCCAACATGTCCCCTCTCAGAGGTTACATCACATCATACCCG
CCCCGTGTGCGCCAATATGGCAATGCGCTTCTCACCCCGATTATCCCACC
CAGCCAAGTTGGCCCGACTTCACGGACGACCAAGCGAGGAACCGCCGCTA
TCAATTATGCGGAAGATGGTTACGACGATGAAGACTTTGAGGACAGCGAG
GGTCCTCGGCGGCCAACCGGGCTAAGGAGCCTTCGACGGGAAGAGTCAAC
GTTCGACAAGGTGCCACTGGCGGAGAAGCTGGGGAAAGAGATACACGCCC
CTGTTGAGGTCCAAGGGGTTTTTCGCGATTGGATGATCAAGAGAATGTTG
CGACCAGCACGCTCTGCCACAACTGTGGTCTTTTGTACGAACGAGACAAG
GTGGCCCCCGAATGGTCCAGAGATCTACACCGTCACGATATGCCCATCGG
CCGGTAGGGAGCGCCAAACTTGGAGATGCACCAACTGTATGGTTTGGGGT
ACGGCGGTTTGGGCCGTACGAGATGGCCCAGCAGGTCCAAGATTGCGCCG
ATCAACTGCAAATCCAAGCGCAGCTTCCTCTTACCCTTATACCTATCCGA
ATTGATTTGGAGGTCCCAGCGCATCAGCCCCTAGAACCATTCCCTTTGCC
GCGAACAGTCCTCGATCCCAGTATCAACCCTACCTTGCCCGCCTACAGAC
GGCCGGAGGCGCTGCCTGCCTATCGCATCAAAGACACGTTCCTTTGGAAT
CTTCACGAGGCTCTTGCGACTCCCGAAGAGTTTGCCGTAGGATTCGTTCG
CGATATGGACCTACCGAATCCCCAGGCCATGACGATGGCTATTAGCAACC
AGATTCGTCAACAATTGGAAGAATATGCCGGCGTTGCCCTGCATCCGTTA
TTCCAGAGTGTACAGCCGAAGCCTCCAGTTCCGCAGATTGGCCTGTCGCG
AGATGTGTCTGCTACACCGGTTTCCACCCACGCCGCGACGCCTGACAGCA
GACCCAACCAAGTAACGGTGACCAAAGAACCTCTCGTGAACGACAGCATA
CTAAACCCGGATGACGCGTATCGGTGCATGATCAACCTAAATATCAACTT
GCAAAACAAACTGTACACGGACAAGTTTGAATGGTCTCTATTGCATCCTC
CGGGTATGGCGGAGGAGTTTGCCAGAATTACGTGCGCGGACCTTGGTCTA
GGTGGGGAATGGGTCGGGGCCATTGCGCATGGCATCTACGAAGCCGCTCT
GAAATTGAAGAAAGAAGTATGCGAAAGTGGTGGACTCATCAGCGGCATGG
GTGGTTATGGTAATGAGATCGACAATCAAGCTGCCAACGGCGCGGAGGCG
GGCTGGCGTTACGATCCCGAGGGACTAGGCGACGAATGGGAACCTAAGGT
GGAAACGCTGTCAAAGGAGGAAATTGAGAAGCGTGAGGGTGATCGCGAAC
GTCAGATTCGTCGTCTACGTCGAGAGACGGCCAGATTCTCCTCGACTGCG
GGCATAACGCCCGACGCCTCCCGACAGGGCAGTGGTTACTTTGACGTCGA
CAGTGAGACGCCGCTCGGAAGAGGCGAGCGGAGCAAACGGAAGAGACGAT
TCCGCAGCCTGAGTCCCTCGGGGAGAGGAGGAACCCCTGGAGGACGAGGG
ACTCCGGACACTGGTTCAGGAGCTGGCTATGGTGGAGGTGGCGGTACACT
TGCTGACTGATGGCCAACATGTCCCCTCTCAGAGGTTACATCACATCATA
CCCGCCCCGTGTGCGCCAATATGGCAATGCGCTTCTCACCCCGATTATCC
CACCCAGCCAAGTTGGCCCGACTTCACGGACGACCAAGCGAGGAACCGCC
GCTATCAATTATGCGGAAGATGGTTACGACGATGAAGACTTTGAGGACAG
CGAGGGTCCTCGGCGGCCAACCGGGCTAAGGAGCCTTCGACGGGAAGAGT
CAACGTTCGACAAGGTGCCACTGGCGGAGAAGCTGGGGAAAGAGATACAC
GCCCCTGTTGAGGTCCAAGGGGTTTTTCGCGATTGGATGATCAAGAGAAT
GTTGCGACCAGCACGCTCTGCCACAACTGTGGTCTTTTGTACGAACGAGA
CAAGGTGGCCCCCGAATGGTCCAGAGATCTACACCGTCACGATATGCCCA
TCGGCCGGTAGGGAGCGCCAAACTTGGAGATGCACCAACTGTATGGTTTG
GGGTACGGCGGTTTGGGCCGTACGAGATGGCCCAGCAGGTCCAAGATTGC
GCCGATCAACTGCAAATCCAAGCGCAGCTTCCTCTTACCCTTATACCTAT
CCGAATTGATTTGGAGGTCCCAGCGCATCAGCCCCTAGAACCATTCCCTT
TGCCGCGAACAGTCCTCGATCCCAGTATCAACCCTACCTTGCCCGCCTAC
AGACGGCCGGAGGCGCTGCCTGCCTATCGCATCAAAGACACGTTCCTTTG
GAATCTTCACGAGGCTCTTGCGACTCCCGAAGAGTTTGCCGTAGGATTCG
TTCGCGATATGGACCTACCGAATCCCCAGGCCATGACGATGGCTATTAGC
AACCAGATTCGTCAACAATTGGAAGAATATGCCGGCGTTGCCCTGCATCC
GTTATTCCAGAGTGTACAGCCGAAGCCTCCAGTTCCGCAGATTGGCCTGT
CGCGAGATGTGTCTGCTACACCGGTTTCCACCCACGCCGCGACGCCTGAC
AGCAGACCCAACCAAGTAACGGTGACCAAAGAACCTCTCGTGAACGACAG
CATACTAAACCCGGATGACGCGTATCGGTGCATGATCAACCTAAATATCA
ACTTGCAAAACAAACTGTACACGGACAAGTTTGAATGGTCTCTATTGCAT
CCTCCGGGTATGGCGGAGGAGTTTGCCAGAATTACGTGCGCGGACCTTGG
TCTAGGTGGGGAATGGGTCGGGGCCATTGCGCATGGCATCTACGAAGCCG
CTCTGAAATTGAAGAAAGAAGTATGCGAAAGTGGTGGACTCATCAGCGGC
ATGGGTGGTTATGGTAATGAGATCGACAATCAAGCTGCCAACGGCGCGGA
GGCGGGCTGGCGTTACGATCCCGAGGGACTAGGCGACGAATGGGAACCTA
AGGTGGAAACGCTGTCAAAGGAGGAAATTGAGAAGCGTGAGGGTGATCGC
GAACGTCAGATTCGTCGTCTACGTCGAGAGACGGCCAGATTCTCCTCGAC
TGCGGGCATAACGCCCGACGCCTCCCGACAGGGCAGTGGTTACTTTGACG
TCGACAGTGAGACGCCGCTCGGAAGAGGCGAGCGGAGCAAACGGAAGAGA
CGATTCCGCAGCCTGAGTCCCTCGGGGAGAGGAGGAACCCCTGGAGGACG
AGGGACTCCGGACACTGGTTCAGGAGCTGGCTATGGTGGAGGTGGCGGTA
CACTTGCTGACTGATGGCCAACATGTCCCCTCTCAGAGGTTACATCACAT
CATACCCGCCCCGTGTGCGCCAATATGGCAATGCGCTTCTCACCCCGATT
ATCCCACCCAGCCAAGTTGGCCCGACTTCACGGACGACCAAGCGAGGAAC
CGCCGCTATCAATTATGCGGAAGATGGTTACGACGATGAAGACTTTGAGG
ACAGCGAGGGTCCTCGGCGGCCAACCGGGCTAAGGAGCCTTCGACGGGAA
GAGTCAACGTTCGACAAGGTGCCACTGGCGGAGAAGCTGGGGAAAGAGAT
ACACGCCCCTGTTGAGGTCCAAGGGGTTTTTCGCGATTGGATGATCAAGA
GAATGTTGCGACCAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000228nuclear chromosome
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54662ASPNIDRAFT_54662Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54662-T1ASPNIDRAFT_54662-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54662-T1.cdsASPNIDRAFT_54662-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54662-T1.exon4ASPNIDRAFT_54662-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54662-T1.exon3ASPNIDRAFT_54662-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54662-T1.exon2ASPNIDRAFT_54662-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54662-T1.exon1ASPNIDRAFT_54662-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54662-T1.utr5p1ASPNIDRAFT_54662-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006939
DBxrefPFAM:PF04855
ProductSNF5/SMARCB1/INI1 protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:74106..76198 -
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